Remersonia thermophila: 98126242
Help
Entry
98126242 CDS
T10833
Symbol
VTJ83DRAFT_5041
Name
(RefSeq) hypothetical protein
KO
K10858
DNA mismatch repair protein PMS2
Organism
rthe Remersonia thermophila
Pathway
rthe03430
Mismatch repair
rthe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
98126242 (VTJ83DRAFT_5041)
03460 Fanconi anemia pathway
98126242 (VTJ83DRAFT_5041)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98126242 (VTJ83DRAFT_5041)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
98126242 (VTJ83DRAFT_5041)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
98126242
NCBI-ProteinID:
XP_070866491
JGI:
Remth1_5041
LinkDB
All DBs
Position
4:complement(join(3197774..3201048,3201110..3201206,3201264..3201305))
Genome browser
AA seq
1137 aa
AA seq
DB search
MASNATIKAIDSSTIHQIQSGQVIVDLCSVAKELVENSLDAGATTIDVRFKNQGLDSIEV
QDNGAGIASHNYESVALKHYTSKLSTYDDLTELQTFGFRGEALSSLCALSRFSIVTCTQQ
EAPRATRLEFETSGKLKSTLVVSGQRGTTVIVENLFYNLPVRRRELERNIKREWGKVIAL
LNQYACIQTGVKFTVSQQPNKGKRMVLFSTKGNPTTRENIINVFGVKTMNALVAMDLRLE
LVPSAGPLTKGKARADGSSAEVRVVGHISRPAHGEGRQTPDRQMFYVNGRPCGLPQFAKV
FNEVYRTYNSSQSPFIFADIRLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESLIELFEK
QDVTIPIAKPQAPKPTPSKAPASARSAASTSTRARNTAAEPDAEAEPSSPLHPDRPSHED
DDDDDDDDDDTPRGAQDDEGDESEGEGDPISDQAGAAKGNKPKVSPPASRSTNRPAATAD
IRMILSQRPAGRAVIDRERSEGGQAKLNEDGVGGDIPSNTTVANEEPAHETVKAGLSDSV
AAGTVTEAANENSVDQPSPSADLAAPTADSERSTSPQLDNEPEPSVPAIPPPSQPPSSRP
ILLASSRPPKRPTQEATITIGDHTVSVAGSSAKRPRVSEASGIRKPAGSSIGTKRKAPLP
SFGGRLTQLFSAAAARDSSSADPIEETTEGSDEEMEAYDDEDEGGTEGERAMEDEEEEED
EAGEESLFVSQSADAVMEDEEDDHEEPTPSSPRPTPKNATNAPSSPAHEEAPDASHSCHG
DHGDDDGDYVDEDEKKAQEDEKVQAMIDAAEAAAAPTEEGERRSELFVKGRSRRKDMTVN
LAQRVKTSLDDIERRIASLAAHLPPPSRDASDAGGPEGLDAADAEEKLSLKITKSDFAKM
RIVGQFNLGFILAVREAAAAASPGEDADHAAADDDELFIIDQHASDEKYNFERLQATTTV
QSQRLVQPKALELTALEEEIILEHIPQLERNGFQVAVDTSGAKPVGQRVQLLSLPLSRET
TFSVADLEELVFLLGDNPTSSPSTVPRPSKVRKMFAMRACRSSIMIGRALSARQMARVVR
HMGEMDKPWNCPHGRPTMRHLCGLGAWDGRGWREEDRAGGQRTNWAAWARERRGEEE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaatgctaccatcaaggccatcgactcgagcacgatccaccaaatccagtcc
ggccaggtcattgtcgatttgtgctccgtcgccaaagagcttgtcgaaaacagcctcgat
gccggagccaccaccattgatgtccgcttcaagaaccagggcctggactcgatcgaggtc
caggacaatggcgcgggcatcgcatctcacaactacgagtcggtggccctcaagcactac
acctccaagctctccacctacgatgacctcaccgagctgcagacctttggctttcgaggc
gaggccctgtcgtccctgtgcgccttgtcccgcttctccatcgtgacgtgcacccaacag
gaggcgccccgcgccacccgcctcgagttcgagacctcgggcaagcttaagagcactttg
gtcgtctcgggccagcgtggcaccaccgtcatcgtcgagaaccttttctacaacctgccc
gtgcgccgccgcgagctggagcgcaacatcaagcgtgagtggggaaaggtcatcgccctg
ctcaaccagtatgcctgcatccagaccggcgtcaagtttaccgtctcgcagcagcccaac
aagggcaagcgaatggtgctcttctccaccaagggcaaccccaccacccgcgagaacatc
atcaatgtgtttggcgtcaagaccatgaatgcgctcgtcgccatggacctgcgcctcgag
ctcgttccctccgccgggcccctcaccaagggcaaggcgcgcgccgacggttccagcgcc
gaggttcgagtcgtgggccacatctcccgtcctgcccacggcgagggccgccagacgcca
gacaggcagatgttttacgtcaacggccggccctgcggcctgccccagttcgccaaggtt
ttcaacgaggtgtatcgcacctacaactcgtcccagtcgcccttcatcttcgccgacata
cgcctcgacacccatctctacgacgtcaacgttagccccgacaagcggaccatcctgctg
cacgaccaggggcagatgctcgacaatctgcgggaatccctgatcgagctgtttgagaag
caggatgtcaccatcccgatcgccaaaccgcaggcacccaagccgacgccgtcgaaagca
ccagcgagcgctcgttcggctgcgtccacgtccactcgggccagaaacaccgccgcggag
cccgatgcggaagccgagccgagctcgccgttgcaccccgaccgcccgtctcacgaagac
gatgatgacgacgacgatgacgatgacgacacgccccgcggtgctcaagacgatgaaggg
gatgagagcgagggggaaggagaccccatctcggatcaggcgggagcagcaaaaggcaac
aaaccaaaggtttctccaccagcgagtcgcagcacgaaccgaccggcagctacggcggac
atccggatgatactttcgcagcgtcctgccggccgtgctgttattgatcgcgagcgatct
gagggtggtcaagcgaaactgaatgaagatggggtgggcggtgacataccatcaaacaca
acagttgccaacgaggagcctgcgcacgagacggtaaaggccgggttatctgattctgtg
gcagcaggaacggtgacggaggctgcgaatgaaaactctgtagaccaacctagcccatcc
gccgacctcgcggctccgacagcggattcagaacgatcaacatccccgcagctggacaac
gaacccgagccgtcggttcccgccatcccgcccccctcgcagcctccatcgtcgaggcct
atcctcctggcatcctctcggcctcccaagcggcctactcaagaggctacgattacgatc
ggcgaccacacggtaagcgtggctgggagttctgccaaacgccccagggtaagcgaagcc
tcggggatacgcaaaccggcaggctccagcatcgggacgaaacggaaggctccgttgcca
tcgtttggcgggaggctcactcaactcttctcggctgcggcggctcgcgattccagctcg
gccgatccaatcgaggagacaaccgagggttccgatgaagaaatggaggcctatgatgat
gaagatgaaggcgggacagagggagaaagggcaatggaggatgaagaagaagaagaagac
gaagcaggcgaagaatcgctcttcgtgtcccaaagcgcggatgctgtgatggaggacgag
gaggatgaccacgaagaacccacaccctcaagcccgcgtcccacaccgaagaacgccacc
aatgcgcctagtagccctgctcacgaggaggcgcctgatgcctcgcattcgtgccatgga
gaccacggcgatgatgacggtgactacgtcgacgaagatgagaagaaggcccaggaagac
gagaaggtgcaggccatgattgacgctgctgaggctgccgcggcgcccaccgaggagggc
gagaggcgctccgaactctttgtcaagggacgctcgagacgcaaagacatgacggtcaac
ctggcccagcgggtcaagaccagcctagacgacatagagcggcgcatcgcctcgctcgcc
gcccacttgccgccgcccagccgggacgcctcggacgccggcgggcccgagggactcgac
gctgcggacgccgaggaaaagctgtcgctcaagatcaccaagtccgactttgccaagatg
cgcatcgtcggccagttcaacctgggcttcatcttggccgttcgcgaggccgccgccgcc
gcgtcgccgggtgaagacgccgaccacgcggccgccgacgacgacgagctcttcatcatt
gaccagcacgcctcggacgaaaagtacaactttgagcgcctccaagcgacgacaacggtc
cagtcgcagcgcctcgtgcagcccaaagcgctcgagctcacggcgctcgaggaggaaatc
atcctcgagcacatcccccagctcgagcgcaacgggttccaggtggcggtggacacgtcc
ggcgcgaagccggtcggccagcgcgtccagctgctcagcctgccgctcagccgcgagacg
accttttcggtggccgacctggaggagctcgtgttcctgctgggcgacaacccgacgtcg
agccccagcacggtgccccgcccgagcaaggtgcgcaagatgttcgccatgcgggcctgc
cgcagcagcatcatgatcggccgcgcgctgtcggcgcggcagatggcgcgcgtcgtgagg
cacatgggcgagatggacaagccctggaactgcccgcacggcaggcccacgatgcggcat
ctctgcggcttgggggcgtgggacgggcgcggttggcgcgaggaggatcgggcgggcggg
cagaggacgaactgggctgcgtgggcaagggagaggagaggagaggaagagtaa
DBGET
integrated database retrieval system
