KEGG   Remersonia thermophila: 98126320
Entry
98126320          CDS       T10833                                 
Symbol
VTJ83DRAFT_5111
Name
(RefSeq) hypothetical protein
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
rthe  Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rthe04121]
    98126320 (VTJ83DRAFT_5111)
   03400 DNA repair and recombination proteins [BR:rthe03400]
    98126320 (VTJ83DRAFT_5111)
Enzymes [BR:rthe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     98126320 (VTJ83DRAFT_5111)
Ubiquitin system [BR:rthe04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    98126320 (VTJ83DRAFT_5111)
DNA repair and recombination proteins [BR:rthe03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    98126320 (VTJ83DRAFT_5111)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-rbx1 zf-C3HC4_4 CD1107-like Prok-RING_4 RING_XB3-XBAT31 DUF1272 zf-ANAPC11 DZR_2 Sina_RING zf-RING_10
Other DBs
NCBI-GeneID: 98126320
NCBI-ProteinID: XP_070866561
JGI: Remth1_5111
LinkDB
Position
4:join(3446134..3446443,3446513..3446598,3446677..3446769,3446824..3447797,3447857..3448129,3448190..3448294,3448350..3449217)
AA seq 902 aa
MPPRRGKRQRDVIDLTASDPDDARPAKSPRHLSTPGSSQASGPGFSQPSSSAPFPAPPSS
SAPGPSGSQHLLSVLPADDDFEPSTQELTQRDDGPPFEHYGYFESKIVGVRYYNGVATVG
ELVLCTREPDNQYDSNAIRVDNVMGRQIGHIPRAVAEKLAPYLDSGEITMEAILTGEKGY
YDCPIRIHLYGSSLPLARAGLEERLKRDKLIKATLLKQTRKENDLQRRQAMGLKSGRGTA
GFQDGEEVSLEELAQASQAVNLRAGADMAQTLVMDEGQLSKLPQAEQPEKVSAKLLPYQL
QGLAWLQAKEKPAFPEPGSAESVQLWKRDAKGRYVNIATNFTVASPPALLSGGILADDMG
LGKTLQIISLIVTGGKGSTLIVAPVSVMSNWEQQIKRHVHEEHAPTVLIYHGAGRQASAR
SLKTFGVVVTSYGTLSSESAANGPLFKMDWRRVVLDEGHTIRNAKTKAAEAACGLKAQSR
WVLTGTPIVNNIKDLHSLLKFLRITGGIEQPDIFNAAIARPLSYGDVNAEALLQTLMRDL
CLRRRKDMKFVDLKLPPKTEYIHRIAFWPDEKKRYEALLSEAKGALKEYQERSKLGQKGR
FQGVLERLLRLRQTCNHWTLCRDRITDLMSLLEDQDVVPLNDKNRALLQQALQLVLESQE
ECPVCMETMTDAVITHCKHSFCKPCIAKVIDIQHKCPLCRAELAEDKLVEPAPEHSAEEE
LQELDQETKSSKTEALLKILQATLKNQGSKVIIFSQWTSFLTVIQRQLDEAGYTYTRIDG
SMNTAQRDAAMRALDTDPETRIMLASLGVCSVGLNLVAADTVVLADSWWAPAIEDQAVDR
VHRLGQTRPTTVWRLVMEGTVEERVLDIQGEKRELVSKAFQEKGKQKKAKETRMADVLKL
LA
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgccgccgcgtcgaggaaagcggcagcgcgatgtcatcgacctgaccgcgtccgatccc
gatgacgcacgccctgccaaaagcccacgtcacctctcgacgccgggcagctcgcaggcc
tcgggcccgggcttcagccagccatcttctagcgccccattcccggcaccgccgtccagt
tccgcccctggccccagcgggagccagcacttgctctccgtcttgccggccgatgatgat
ttcgagccctcgacgcaggagctcacgcaacgcgacgatggcccgccgttcgagcattat
gggtatttcgagagcaagatcgtcggggtgaggtattacaatggcgtggctacggtcgga
gagctggtcctctgcacgagagagcccgataaccagtacgactccaatgccatccgcgtg
gataacgtgatgggccgccagataggccacattccccgggcggtggctgagaagctggcc
ccgtatctggacagcggagaaatcaccatggaggccattctcaccggcgagaagggttac
tacgactgcccgatccgcatccacctgtatggctccagccttcctttggcccgtgccggc
ctggaggagcgtctcaagcgagacaagctgatcaaggccacgctgctcaagcaaacccgc
aaggagaatgatcttcagcgccgccaggccatgggcctgaagagcggccgcggaaccgcg
ggcttccaggatggcgaggaggtgtccttggaggagcttgcccaggccagccaggccgtc
aaccttcgcgccggcgccgacatggctcagaccttggtcatggatgagggccagctctcc
aagctgccacaagccgagcagcccgaaaaggtgtcggccaagctgttgccgtatcagctg
cagggcctcgcctggctccaggccaaggagaagcccgcgttcccggagcccggctccgca
gagtccgtgcagctctggaaacgcgatgccaagggccgatacgtcaacatcgccaccaac
ttcaccgtcgcctcgcccccggcgctgctgtcgggcggcatcctcgccgacgacatgggc
ctgggcaagacgctccagatcatcagcctcatcgtgacgggcgggaagggcagcaccctc
atcgtggcccccgtgagcgtcatgagcaactgggagcagcagatcaagcgccacgttcac
gaagagcacgcacccaccgtcttgatctaccacggcgctggccggcaagcttccgccagg
tcgctgaagacctttggggttgtcgtcaccagctacggcaccctgagcagcgaatcggcc
gccaacgggcccctgttcaagatggactggcgacgagtggttctggacgaaggccatacc
atccgcaatgccaagaccaaggctgcagaggcagcgtgcgggttgaaggcacagtccaga
tgggttcttaccggcacgcccatcgtcaacaacatcaaagatctccattcgctcctcaag
ttcctccggatcacaggcggcatcgagcagcccgacatcttcaacgcggcgattgcgagg
ccgctttcgtacggggatgtgaacgcagaggccctgctgcagaccctgatgagagacctc
tgcctccgccggcgcaaagacatgaagtttgtggacctcaagcttccgccaaagaccgag
tacattcaccgcatcgccttctggccggacgaaaagaagagatacgaagccctgctctcc
gaggccaaaggcgccttgaaggaataccaagaaaggtccaagctcggtcagaagggtcgc
ttccagggtgttctcgagaggctgctgcggctccggcagacatgcaatcattggactctg
tgcagggaccgcatcacggacctgatgagcctcctcgaggaccaagacgtcgtgcccctc
aacgacaagaaccgcgcccttttgcagcaggcgctccagctcgtcctggaaagccaagag
gaatgccccgtctgcatggagacgatgacggatgccgtcattacgcactgcaagcactcc
ttctgcaagccctgcatcgccaaggtcatcgatatccagcacaagtgtcccttgtgtcgc
gcagagctggccgaggacaagctcgtcgaacccgcgcccgagcactcggccgaggaggaa
ctgcaagagcttgaccaggagaccaagagctccaagaccgaggcgcttctcaagatcctc
caggccacgctcaagaatcagggctccaaggtcatcattttctcccagtggacgtccttc
ttgaccgtcattcagcgccagctcgacgaagcgggctacacctacacgcgcatcgatggc
agcatgaacacggcgcagcgcgacgctgccatgcgggccctcgacaccgacccggagacc
cgcatcatgctggccagcctcggcgtgtgcagcgtcggactgaacctggtggcggccgac
acggtcgtcctggccgacagctggtgggccccggccatcgaagaccaggccgtcgaccgc
gttcatcgtctaggccagacccggcccaccacggtgtggcggctcgtcatggagggcacc
gtcgaagagagggtgcttgacatccagggcgagaagcgcgagcttgtgagcaaggcgttc
caggagaaggggaaacagaaaaaggcaaaggaaacaaggatggcagatgtgctcaagttg
ctcgcgtga

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