Remersonia thermophila: 98126442
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Entry
98126442 CDS
T10833
Symbol
VTJ83DRAFT_5221
Name
(RefSeq) hypothetical protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98126442 (VTJ83DRAFT_5221)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
98126442 (VTJ83DRAFT_5221)
Surveillance factors
Other surveillance factors
98126442 (VTJ83DRAFT_5221)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
98126442
NCBI-ProteinID:
XP_070866671
JGI:
Remth1_5221
LinkDB
All DBs
Position
4:complement(join(3890543..3890853,3890914..3894731,3894836..3894901,3895126..3895229))
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AA seq
1432 aa
AA seq
DB search
MTQLTSSFASAAAGQTRDSRNGRSDSTRGSGSGDWPRSNGTRTFRRPSTTPYNTSNSLLR
YTKEELLDIYKNSFDSSLVDTSSLLMPTWNPTPQINGTQARPWGKTSDSSHAPQDPSACW
DADGTVKPISLEEMSAEEREMFATDVNSTMKPPQQNKDGNLGGPGGTGGRKTSISVGNHP
SNYQGSPSTAPRPGTRRRETTDTNPFPGPATASPTASRFARDEPWLPRRNPDVKEAITDE
PEEDATARDSTPSKPQPPLSMPRSNTTGSSAFGGSGSIWGSGGASTPMGVFGNFALPTPG
LGGIGDKRLASGGSRLAHLIPKDSADHAPAKPSDAPSWRSRPRTDTDPFSADDGPSGPAV
PSARQDNTSPTTSAGENPRRNVFDTPVKSSPGDFGMGGLSLGGPGDGNGSGSPETNPYRS
PLTERDAETRGDHDADRHGQGNAGADPQSAFGTFPRTFGAAALDGSDRSQTSSVGAKGFG
SVNTFSGWPAGPSIGTPDRERAPFPSAFGSGLFGPLGDIPSPGLGGLGSVFGPPSASRLG
RGKLESLFPPSMQAQMHGHDDHLGESASDLRQPNPLGAIGRTTVGLQRESTGSPARSNRG
VFEELFPSSNATQSPFTTTEPAQPALTSTVQTSSFTETAGSVAFPSNQSPAEPAPMRTMV
MPDRMRWVYLDPQGILRGPFSGLEMNDWYKANFFTADLRVKRLEDPDFEPLGQLIRRIGN
SREPFLVPQMGIPHGPPQAPSPFAANGEIIPPLQGAFPSFGRTLTAEQQNELERRKQEEQ
LYQARQREFAQQHATFGALPPIRPGVPGALHHMGSAHSLQSQASFGSIASPIGMAPQRPL
GPIGPGAGFFDPAATLPTVPPQPPIGPAVDLYGPNLNFAERQLLAAGAQGSEALSGTNNF
PGSQAPGAGSTAEPGSLRGGLPSVDELQKDEEGFKERLQEFHQLRAQFDAEQAASAAAAA
AAAAAAEANEPSEGKDDTTQSEEHAGPATADQTQPAAVPPSSSAAEPKKTSHAQQPEMTL
TEKVRKTQADNKANQQAGDLPMPFPPPAQTTPIAAPTAQRPAAGLPAKFGDRSASGTPET
TDPASLAPPPPAPWAAQASAGPKAPSLKEIQEAEAKKAAKKEEAAAAARRAALEQEAAAI
REREKAAAAAANSGLPATSTWGSSSPVTVGSPWKQPAAVKAGGASAGGSGAKKTLADIQR
EEEIRKQKAKEAAAAAQATAPAASGLGKRYADLASKTVGSPVAAPLAASQGGGWSTVGAG
GKVKPPLAGPATQPRAVIVSKPSTPVAAATAKPPPKPATSLKDAKTQAMEEFKKWLNREL
TRGLNGVSDIEQFAATLLEMPLDSTILSEAVYAYSTTMDGRHFAEEFVRRKKLADKGQFV
DKDAGTSPVLDTKNGNGGWSEVAKKGNSHAVGKSEEAIPGFRVVHSKKKGKK
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttgacgtccagcttcgcctctgctgcggccggccagactcgggactcgagg
aacgggcgcagcgattcgacccgtggctccggaagtggtgactggcctcgctctaatggg
acgagaaccttccgacgaccctccaccaccccgtataacaccagcaactccctcctccgc
tacaccaaggaggagctcttggacatctacaaaaacagcttcgattcctcgctcgtggac
acctccagcctcctcatgccgacttggaacccgacaccccaaatcaacggcacccaggcc
cgaccgtgggggaagacatccgattcatcccacgccccccaggacccgagcgcctgttgg
gacgcagacggcaccgtgaaacccattagcttggaggagatgtcggcggaggagcgcgag
atgtttgccaccgatgtcaactcgacgatgaaaccgccccagcagaacaaggacggcaat
ctcgggggtcctggtggcacaggcggcaggaagacatccatcagcgtcgggaaccatccg
tcaaactaccaaggctcgccgtccaccgcgccccgacccggcacgcgccgcagggagacc
accgatacgaatcccttccctggcccggccaccgcgtccccgaccgccagccggtttgcg
cgggacgagccgtggctgccacgtcgtaatcccgacgtcaaggaagccatcaccgacgag
cccgaggaagatgcgaccgcgcgagatagcaccccgtcaaaaccgcagccgcccttgtcc
atgccgcgcagcaacacgaccggcagctcggcgttcggaggcagcggctccatctggggc
tccggtggagcgtcgacgcccatgggagtctttgggaatttcgccctgcccacgccgggc
ctcggaggcatcggcgacaagcgcctggcaagcggtggaagccgccttgcgcatctcatc
cccaaggactcggccgaccatgcgcccgcaaagcctagcgatgcccccagctggcgctct
cgcccccgcaccgacacggatcccttttctgccgacgatggcccttcgggtcccgccgtg
cccagcgctcgtcaggacaacacgagcccgaccacgtctgcgggcgaaaacccgcgtcgc
aatgtctttgacacgcccgtcaagtccagccccggagactttggaatgggcgggctcagc
ttgggtggcccgggcgatgggaacggttccggtagccccgagacgaatccttaccgcagc
cccttgacggaacgcgatgccgagacccgcggagaccacgatgccgaccgccatggccaa
ggaaacgccggcgccgatccccagtccgccttcggcaccttcccgcgcacgtttggcgcc
gccgctctcgatggcagcgaccgcagccagacctcgagcgttggcgccaagggctttggc
agcgttaacactttctccggctggccagcgggcccttccatcggtacccctgatcgcgaa
cgggcacctttcccgtccgccttcggcagcggcctgtttggcccgctcggcgatatcccc
tctcccggcctcggcgggctcggctccgtcttcggtccccccagcgcctcgaggctgggt
cgcggcaagctcgagtccctcttccccccgtccatgcaggcgcagatgcacggccacgac
gatcatctcggggagtcggcttccgaccttcgccagccgaaccccctcggggccatcggc
cgcacgaccgttggattgcaacgcgagagcaccggcagcccggctcggtccaacaggggc
gtttttgaagagctcttcccatcgtcgaatgcgacccaatcgcctttcacgaccaccgag
ccggcccaacccgcgctgacgtcgaccgtccagacgtcgtcgttcaccgagactgccggc
tccgtggcgttcccatcgaaccagtcgcccgccgagcccgcccccatgaggaccatggtt
atgccagatcgtatgcggtgggtgtacctggatccccagggcatcttgcggggtcccttc
agcggccttgagatgaacgactggtacaaggccaacttcttcacggcagacctccgcgtc
aagcgcctggaggatcccgactttgagcccctcgggcagctgattcgccgcatcggaaac
tctcgcgagccgttcctggtgccccagatgggcatcccccacggccccccgcaggcgccc
tcgccgttcgccgccaacggcgagatcatccccccgctccagggcgcctttccgtcgttt
gggcgcactctcacggccgagcagcagaacgagctggaacgccgtaagcaggaggaacag
ctctaccaggcgcgccagcgtgagttcgcacagcagcatgccacctttggcgctctgccg
cccatccggcccggcgttcccggcgccctgcatcacatggggagcgcccacagcctgcag
agccaggcgagctttggaagcatagcgtcgcccatcggcatggctccacagcgccctctc
ggtcccatcggcccgggcgcgggcttctttgacccggctgccaccttgccgacggtaccg
cctcagccacccattggacctgccgtggatctgtacggcccgaacctgaactttgccgag
cgtcagctgctcgctgccggtgcgcagggctctgaggccttgagcggcaccaacaacttc
cctggttcccaggcgcccggcgccggttctacggccgagcccggcagcttgcgtggcggg
cttccgagcgtcgacgagctgcagaaggatgaagagggcttcaaggagaggctgcaggag
ttccaccagctacgggcccagttcgatgccgagcaagctgcctccgccgccgccgccgcc
gccgccgccgccgccgcggaggcgaacgagccctcggagggcaaggatgacacgacgcag
agcgaggagcacgctgggcccgctacagcggaccagacccagccggctgcagttcctccg
agctcgtcggccgcggagcccaagaagacgtcgcacgcgcagcaacccgagatgacgctc
accgaaaaggtgcgcaagacccaggctgataacaaggccaatcagcaggccggagatctt
ccgatgccgttccctccgcccgcgcagaccacgcccatcgccgcccccacggcccagcgc
ccggccgctgggcttcccgccaagtttggcgatcgctcggcgtcgggcacccccgagacc
acggacccggctagcctcgctcccccgccgccggcgccgtgggcggctcaggccagcgcg
ggccccaaagcgccgagcctgaaggagatccaggaggccgaggccaagaaggccgccaag
aaggaagaggcggcggcggcagctcggcgcgctgccctggagcaggaggcggcggccatt
cgtgagcgcgagaaggcggcggcggcggcggcgaactcggggctgcctgctaccagcacg
tggggcagcagctcgcccgtgacggtgggcagcccgtggaagcagcccgcggcggtcaag
gccggcggtgccagcgccggaggcagcggcgccaagaagacgctggccgacatccagcgc
gaggaggagatccgcaagcagaaggccaaggaagcggcggccgccgcgcaggccacggcc
cctgccgcctcgggcctgggcaagcgctacgccgacctggccagcaagacggtgggctcg
ccggtcgccgcgccgttggcggccagccaaggcggcggatggtcgacggtcggagctggc
ggcaaggtcaagccccctctggccggtcccgccacgcagccccgggccgtcatcgtcagc
aagccgagcacgccggtggccgccgccaccgccaagccgcctcccaagccggccacatcc
ctcaaggacgccaagacgcaggccatggaagagttcaagaagtggctgaaccgcgagctg
acccgcggcctgaacggggtctccgacatcgaacaattcgcggccacgcttctggagatg
cctcttgactcgaccatcctgagcgaggctgtctacgcctacagcacgaccatggacggg
cggcactttgcagaggagtttgtccgccgcaagaagctcgccgacaagggccagtttgtt
gacaaggacgccgggaccagcccggtgctcgacaccaagaacggcaatggcggatggagc
gaggtggccaagaagggcaacagtcatgccgtgggcaagagcgaggaggccatccctgga
ttccgcgttgtccacagcaagaagaagggcaagaaataa
DBGET
integrated database retrieval system
