Remersonia thermophila: 98126526
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Entry
98126526 CDS
T10833
Symbol
VTJ83DRAFT_5298
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
98126526 (VTJ83DRAFT_5298)
Enzymes [BR:
rthe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
98126526 (VTJ83DRAFT_5298)
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
PEGA
EMC7_beta-sandw
Motif
Other DBs
NCBI-GeneID:
98126526
NCBI-ProteinID:
XP_070864673
JGI:
Remth1_5298
LinkDB
All DBs
Position
5:join(238883..240469,240539..240568)
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AA seq
538 aa
AA seq
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MELRAAIRFLGFAVSAFAPGVLGAFGYTSSGNNFIIDAGSANPLIFSVSKSNCDINSIRY
RGTELQYRPQGTHIGSGLGSATVSVSQINGSSRYIKVTCVTSTLTHYMVVRQGDSTIFMA
TYITAEPSIGELRFIARLLPDKLPGEYPYGEVSNTARSSATVEGSDVFIVNGQTRSKFYS
STRFIDEDSHCVYGGSDLMHVCIMTPQQESSSGGPFFRDINSNNAGASTNLYNYMNSGHV
QTEPFRMGLHGPYLMQFSRSGIPRVKNVDVSWFGELGIAGYVPASGRGRVTGRASGVQSG
LEGVVHWYNNNAQYWVRTASNGAFTSPLMKPGTYSMVLYQTEFKIATSTVTVSAGQTVTR
DIAGTFNTTRRTLWQIGQYDGQPTGFRNADKFLRMHPSDSRMAPWGPLTYTVGSSPLSDF
PMALFQAVNNPVTIRFNLPSAPGAATLRIATTLSFAGSRPRATVNNWTGPAPPAPAKIDS
RGVTRGAYRGHGEIYTVNIPAGVLVAGMNTITISSISGSSGATFLSPNFIFDAVELYQ
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagctccgggccgccattcgtttcctcggcttcgccgtgtcggccttcgcgccgggg
gtgctcggcgcattcggctacacctcatcgggcaacaacttcatcattgacgcgggctcc
gcgaatcctttgatcttctccgtgagcaagtcgaactgcgacatcaactcgatcaggtac
cggggcaccgagctccagtatcgcccccagggcactcacatcggctccggacttggctcg
gcgacggtctcggtcagccagatcaacggctcgtccaggtacatcaaggtcacatgcgtg
acgtcgactctgacccattacatggtggttcggcagggcgatagcaccatcttcatggcg
acctacatcacggccgagccctccatcggcgagctgcgcttcatcgcccgcctgctcccg
gacaagctgcccggcgagtatccgtacggcgaggtttcgaacacggcccgctcctccgcg
accgtcgagggctccgacgtctttatcgtcaacggccagacccggtccaagttctactcg
tccacccgcttcatcgacgaggactcgcactgcgtctacggcggcagcgatctgatgcac
gtgtgcatcatgaccccccagcaggagtcgtcctcgggaggtcccttcttccgcgacatc
aactccaacaatgccggcgcgtcgaccaacctgtacaattacatgaacagcggccatgtg
cagaccgagccgttccgcatgggcctccacgggccttatctcatgcagttctcgcgctct
gggatcccgagggtgaagaatgtggatgtgtcgtggtttggggagctcggcatcgccggc
tacgtgccggcctccggccgcggcagggtgacggggagggccagcggagtgcagagcggt
ttggaaggcgtcgtgcactggtacaacaacaatgcccagtactgggtcaggacggcctcc
aacggcgcattcacctcccccctgatgaagccgggtacctactccatggtcctgtaccag
accgagttcaagatcgccaccagcaccgtcaccgtctcggccgggcaaaccgtgaccaga
gatatcgccggcaccttcaacaccacccgcaggaccctctggcagatcggccagtacgac
ggccagccgacggggttccgcaacgccgacaagttcctgcgcatgcacccgtccgacagc
cgcatggcgccgtggggccccttgacgtatacggtgggaagctcgccgctgtccgacttc
cccatggctctgttccaggccgttaacaaccccgtcaccatccgcttcaaccttcccagc
gcccccggagccgccaccctgcgcatcgccacgacgctgagctttgcgggcagccgccct
cgcgctactgtcaacaactggacgggcccggcgccgccggcgccggcaaaaatcgatagc
cggggtgttaccaggggtgcgtatcgtgggcacggcgagatctataccgtcaacatcccc
gcaggcgtgctcgttgcgggcatgaacaccatcaccatcagctccatctcgggcagcagc
ggagcgacgttcttgagtcctaactttatctttgacgccgtcgagctttatcaatga
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