Remersonia thermophila: 98126668
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Entry
98126668 CDS
T10833
Symbol
VTJ83DRAFT_5425
Name
(RefSeq) hypothetical protein
KO
K13126
polyadenylate-binding protein
Organism
rthe Remersonia thermophila
Pathway
rthe03015
mRNA surveillance pathway
rthe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
98126668 (VTJ83DRAFT_5425)
09123 Folding, sorting and degradation
03018 RNA degradation
98126668 (VTJ83DRAFT_5425)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98126668 (VTJ83DRAFT_5425)
03041 Spliceosome [BR:
rthe03041
]
98126668 (VTJ83DRAFT_5425)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
98126668 (VTJ83DRAFT_5425)
mRNA cycle factors
Stress granule specific factors
98126668 (VTJ83DRAFT_5425)
Spliceosome [BR:
rthe03041
]
Complex C
Other components
Complex C specific factors
98126668 (VTJ83DRAFT_5425)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_5
RRM_7
RBD_DEAH11
RRM_Nup35
PABC_AtC3H46
YflT
Motif
Other DBs
NCBI-GeneID:
98126668
NCBI-ProteinID:
XP_070864800
JGI:
Remth1_5425
LinkDB
All DBs
Position
5:join(733516..735728,735797..735959)
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AA seq
791 aa
AA seq
DB search
MSAPAASGAVDQLAADLANTNLNGSENRAPTINTNVASGEFQTADAADAAGPTPNSAAPH
PTSSASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGE
KALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNIL
SCKVAVDEHGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEE
MKANYTNIYVKNINHEVTDDEFRELFAKYGEITSSTLARDQEGKSRGFGFVNFTTHASAA
KAVEELNGKEFRGMELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLSDDV
DDDKLRAMFAEFGPITSAKVMRETVPEPSAEAKAEEGKEKEKKEGEGQAEGQAEGQAEGQ
AEGEAAAAAAAEKKSDKKPERKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVDGKPLYVA
LAQRKDVRKSQLEASIQARNQLRMQQAAAQAGLPQQYMQAPVYYAPGQQPGFLPPGGRGV
PFPQAGLGMPGIQGGRPGQIPPYAQQGGRGGIPPQQLPMYGLAQFPGAPYPQPNNPQFLA
ALHQVQQASIAGGRGGPGRGMPTMPIPGAIPGGPGIPGYPPNGRPQNGAIGGRGGPNRGG
NFAAGRGGVPPAGPLGAPEGLSASSLLQSQLAATTNVQQQKQILGENLFPKIQALQPELA
GKITGMLLEMDNNELVNLIDDEAALVAKVNEAMAVYDEYVKSQQTAGQAPAPAQGEAEAD
KSKEEKTGESA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcccgctgcctccggcgctgtcgatcagctggccgctgatctcgccaacacc
aacctgaacggctctgagaaccgtgcccccaccatcaacaccaacgtggcttctggcgag
ttccagacggccgatgccgccgacgcggccggcccgaccccgaactctgccgctccccac
cccacctcctcggcctccctctacgtgggcgagctggacccgtccgtcaccgaggccatg
ctcttcgagctgttctcccagatcggctccgtcgcttcgatccgcgtctgccgcgacgcc
gtcacccgccgctctctcggctacgcctatgtcaactacaactcgacccaggatggcgag
aaggctctcgaggagctcaactacacgctgatcaagggccgcccctgccgcatcatgtgg
tcgcagcgtgaccccgccctccgcaagacgggccagggcaacgtcttcatcaagaacctc
gacacggccatcgacaacaaggccctgcacgacaccttcgccgccttcggcaacatcctg
agctgcaaggtggccgtggacgagcacggcaactccaagggctacggtttcgtgcactac
gagaccgacgaggcggctgcccaggccatcaagcacgtcaacggcatgcttctcaacgag
aagaaggtctacgtcggctaccacatccccaagaaggaccgccagagcaagtttgaggag
atgaaggccaactacaccaacatctacgtcaagaacatcaaccacgaggtcaccgacgac
gagttccgcgagctcttcgccaagtacggcgagatcacgtcgtccaccctggcccgcgac
caggagggcaagagccgcggcttcggcttcgtcaacttcaccacccacgcgagcgccgcc
aaggccgtcgaggagctcaacggcaaggagttccgcggcatggagctctacgtgggccgc
gcccagaagaagcacgagcgcgaggaggagctgcgcaagtcgtacgaggccgctcgcctt
gagaaggctaacaagtatcagggcgtcaacctgtacatcaagaacctgtcggacgatgtg
gatgacgacaagctgcgcgccatgttcgccgagttcggacccatcacctcggccaaggtc
atgcgtgagacggtccccgagccttccgccgaggccaaggccgaggagggcaaggagaag
gagaagaaggagggcgagggccaggccgagggccaggccgagggccaggctgagggccag
gccgagggcgaggccgccgccgccgccgccgccgagaagaagtccgacaagaagcctgag
cgcaagctgggcaagagcaagggcttcggcttcgtctgcttcagcaaccctgacgacgcc
accaaggccgttgccgagatgaaccagcgcatggtggacggcaagccgctctacgtcgcc
cttgcccagcgcaaggacgtccgcaagagccagcttgaggctagcatccaggcccgcaac
cagctgcgcatgcagcaggccgccgcccaggccggcctgccccagcagtacatgcaggcc
ccggtctactatgctcccggccagcagcccggcttcctgccccccggcggccgcggcgtg
cccttccctcaggccggcctcggcatgcccggcatccagggtggccgtcccggccagatc
cccccttatgcccagcagggcggccgcggcggcatccctcctcagcagctccccatgtac
gggctcgcccagttccctggcgccccctacccccagcccaacaacccccagttcctcgcc
gccctgcaccaggtccagcaggcctccattgcgggcggccgtggcggtcccggccgcggc
atgccgacgatgcccattccgggcgccatccccggcggccccggcattcccggctacccg
cccaacggccggccccaaaacggtgccatcggcggccgcggcggccccaaccgcggcggt
aacttcgctgccggccgcggtggcgtccctcctgctggtcctctgggcgctcctgagggc
ctcagcgccagctccctgctccagtcgcagctcgccgccaccaccaatgtccagcagcag
aagcagatcctcggcgagaacctgttccccaagatccaggctctgcagcccgagctggcc
ggcaagatcaccggcatgcttctcgagatggacaacaacgagctcgtgaacctgatcgac
gatgaggccgctctcgttgccaaggtcaacgaggccatggccgtctacgacgagtacgtc
aagtctcagcagaccgccggtcaggctcccgccccggcccagggcgaggccgaggccgac
aagagcaaggaggagaagactggggagtctgcttag
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integrated database retrieval system
