Remersonia thermophila: 98126755
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Entry
98126755 CDS
T10833
Symbol
VTJ83DRAFT_5503
Name
(RefSeq) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rthe Remersonia thermophila
Pathway
rthe03420
Nucleotide excision repair
rthe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
98126755 (VTJ83DRAFT_5503)
03430 Mismatch repair
98126755 (VTJ83DRAFT_5503)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98126755 (VTJ83DRAFT_5503)
Enzymes [BR:
rthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
98126755 (VTJ83DRAFT_5503)
DNA repair and recombination proteins [BR:
rthe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
98126755 (VTJ83DRAFT_5503)
MMR (mismatch excision repair)
Other MMR factors
98126755 (VTJ83DRAFT_5503)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
ADDB_N
Motif
Other DBs
NCBI-GeneID:
98126755
NCBI-ProteinID:
XP_070864878
JGI:
Remth1_5503
LinkDB
All DBs
Position
5:1024784..1027972
Genome browser
AA seq
1062 aa
AA seq
DB search
MTTPSSPATVTSSSQHAILDGLNDAQRRAVTSDAPTVAILAGPGSGKTHTLTARVVWLMD
HDGLRPQDVLVVTFTVKAAREMKERIARTLADGRDKKLILGTFHSIARRYLAAYGRHIGL
SQSFGIADDADSRAIIARICKRMQTGLDPAFARNWISKKKARGAGASGARRGGAAGDRSL
EDLETCYAEYQKHLETSHLLDYDDLLVRCVELLRKFPACVSNIGAVLVDEYQDTNAIQYD
LMTLLAQRRRRITIVGDPDQSIYGWRSADIRNLERLLRDYPGTDCVALERNYRSSKSILA
MSLEVIKQDEKRYKKSLKPIHAKGCRPVLRRLKNPSTEADWIVAELRRVLLLSGSMLTHN
DVAILLRSASLSRHIESALGRAGITYRMVGGFKFYERAEIKTVIDYLRVIHQPENNDALA
RIINTPRRGVGDTTVRNLLEEAETASLSVWAVLTKHCQGLRTAKTKITKQAEQKISGTLL
RPLNDIRAKMGQASGPEPAPLGLVRMIERLLATLGFRKHLEETHPLDHEQRWANVQEFLG
LAADFERDLDRSPDDDALPEIEGLAQAKEADVLQRFLANVSLAADAQTAGDDQQSKPLVT
ISTIHAAKGLEWPIVFIPAVYAGSIPHARSEDDDEERRLLYVAMTRAQSLLYLSYPVSGS
NGERTQVSPFIDPIKHYFHDKGPCLDRPVMAEVSEILRRALPPDEEIYKELPDMFSPEDN
LFPVNPDEAQDADGQSRWREHGPSAKRPRLQGPSNAGQIRAVEGLYMEQVASSQQRLSGS
LEPLPGFVSVGTHHAAITAANARATDAQKSAAAAAAAATATASTTQKRTATTRRPANQMS
ILGFVRSNSLPEERDTLPPPPPPPPSLKHSTSLPLSAGSSTMSQPRTSLVPQQQQQQQRQ
QQHAIDPTLASHRIGTGRLARPAVPRGEEAATPGGRKRYACFSSSPTQAPTAEGEDDGPA
GMAEKRAGCAPASAPALPPAVPFQRRPNLLATSAAMPSAPFTAPSLPKGLGGAGGTFKRP
AGFVRPGLGASASAASSMEKLRRPFKPLTMNQNRPFQPPKPG
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccgtcttcgccggccaccgtcacatcctcgtcacagcatgccatcctggac
ggcctcaacgatgcccaacggcgcgctgtcacgtccgatgcgccgaccgtcgccatcttg
gccggccccggcagcggcaagacgcacaccctgacggcccgcgtcgtgtggctcatggac
catgacggcctccgcccccaagacgtgctcgtcgtcaccttcaccgtcaaggccgccagg
gagatgaaggagcgcatcgcccggaccctggccgacggccgcgacaagaagctcatcctc
ggcacctttcacagcatcgcccgccgctacctggccgcctacggccgccacatcggcctt
tcccaatcctttggcatcgccgacgacgccgactcccgggccatcatcgcccgcatctgc
aagcgcatgcagacgggcctcgatccggcctttgcccgcaactggatcagcaagaaaaag
gcccgaggcgccggcgcctccggagcacgcagaggcggggccgccggagaccggtccctg
gaggacctggagacgtgctacgccgagtaccagaagcacctggagacgtcccacctgctg
gattacgacgaccttctcgtgcgctgcgtcgagctgctccgcaagttccccgcctgcgtc
tccaacatcggcgccgtgctggtcgacgagtaccaggacaccaacgccatccagtacgat
ctcatgaccctcttggcccagcgccgccggcgcatcaccatcgtcggcgacccggaccag
agcatctacggatggcgctcggccgacatacggaacctcgagcgcctgctccgggactac
ccgggaaccgactgcgtcgctctcgagcgtaactaccgctcgtccaaatccatccttgcc
atgtcgctcgaggtgatcaagcaggacgagaagcggtacaagaagagcctcaagcccatc
cacgccaagggctgccggcctgtcctccgccgcctcaagaacccttccaccgaggccgac
tggatcgtcgccgagctccgcagggttctgctcctgtcgggatccatgctgacccacaac
gacgtggccatcctgctccgctccgcctccctgtcgaggcacatcgagagcgccttggga
agggccggcatcacctaccgcatggtcggcggcttcaaattctacgagcgcgccgagatc
aagaccgtcatcgattacctgcgcgtcatccaccagcccgagaacaacgatgcgctcgcg
cgcatcatcaacacgccgcgccgcggcgtcggagacacgaccgtccgcaacctgctcgaa
gaggccgaaacggcgtcgctgagcgtctgggccgtcctgaccaagcactgccaggggctc
cggacggccaagacaaagatcacgaagcaagccgagcagaaaatcagcggcaccctgctc
cggcccctgaacgacatccgcgcgaagatgggccaggcgtcggggcccgagcccgcgccg
ctcgggctggtccggatgatcgagcggctcctcgcgacgctgggctttcggaagcacctg
gaagagacccatcccctcgaccacgagcagcggtgggccaacgtgcaggagttcctcggc
ctggccgccgactttgagcgcgacctggaccggtcccccgacgacgacgcgctgcccgag
atcgaagggctcgcgcaagccaaggaggccgacgtcctgcagcgcttcctggccaacgtg
tctctggccgccgacgcccagaccgcaggcgacgaccagcagagcaagcccctcgtgacc
atctcgaccatacacgccgccaagggcctcgagtggcccatcgtgttcatcccggccgtc
tatgccgggtcgatcccgcacgcgcggtccgaggacgacgatgaggaacgccggctgctg
tacgtcgccatgactcgggcccagagcttgctgtatctaagctacccggtttcggggagc
aacggcgagcggacgcaggtttcgccgttcattgaccccatcaagcactatttccacgac
aaggggccgtgtctggaccggcctgtcatggcggaggtgtccgagatcctgcgtcgagcc
ctcccgcccgacgaggaaatctacaaggagctgccggatatgttcagcccggaggacaat
ctcttccccgtcaacccggacgaagcccaagacgcggatgggcagtctcgctggcgcgag
catggtccatccgcgaagcgaccccgactccagggtccctccaacgcagggcagatccgc
gccgtggagggcttatacatggagcaggtcgcttccagccagcagcgcctgtcgggctct
ttggaacccctgccgggctttgtcagcgtaggtacgcaccacgccgccatcacggccgcc
aacgcgcgcgcaacggatgcccagaaatctgcagcagcagcggcggcggcggcaacagca
acagcaagcacaacgcaaaagcgaactgcaaccacccgccgcccggcgaaccagatgagc
atcttgggctttgtcaggtcgaactctctcccagaggagcgagacaccctaccgccgcca
ccaccaccgccaccaagcctcaaacacagcacttccctgccgctgagcgcgggctcaagc
accatgtctcaaccccggacgtctctggttcctcagcagcagcagcagcagcaacggcaa
cagcaacacgccatcgaccctaccttggccagccaccggataggaaccggaaggttggca
cgcccggctgttccccgcggagaggaggcggccacgcccggcgggaggaagcgatatgcg
tgcttctcgagctcgcctacgcaggcacccacggccgaaggggaagacgatgggccggcg
gggatggccgagaagcgggcgggttgcgcgcctgcttctgcgcctgcgcttccgcccgcg
gttccctttcagcgccgcccgaacctcctggccacgtccgccgcgatgccgtcggctccg
ttcaccgcgccgagcttgcctaaggggcttggcggcgccggtggcacgttcaagaggccg
gccgggttcgtacgtcccggcctgggggcttcggcgtcggcggcgtcgtcgatggagaag
ctgaggaggccgtttaagcctttgacgatgaaccagaatcggccgtttcagccgccgaag
ccggggtga
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