KEGG   Remersonia thermophila: 98126921
Entry
98126921          CDS       T10833                                 
Symbol
VTJ83DRAFT_5653
Name
(RefSeq) hypothetical protein
  KO
K11131  H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
rthe  Remersonia thermophila
Pathway
rthe03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    98126921 (VTJ83DRAFT_5653)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rthe03009]
    98126921 (VTJ83DRAFT_5653)
   03032 DNA replication proteins [BR:rthe03032]
    98126921 (VTJ83DRAFT_5653)
Ribosome biogenesis [BR:rthe03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    98126921 (VTJ83DRAFT_5653)
 Prokaryotic type
    98126921 (VTJ83DRAFT_5653)
DNA replication proteins [BR:rthe03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    Dyskerin complex
     98126921 (VTJ83DRAFT_5653)
SSDB
Motif
Pfam: DKCLD TruB_C_2 PUA TruB_N UPF0113 Pus10_C
Other DBs
NCBI-GeneID: 98126921
NCBI-ProteinID: XP_070865028
JGI: Remth1_5653
LinkDB
Position
5:complement(join(1580753..1581218,1581282..1581951,1582016..1582071,1582145..1582431))
AA seq 492 aa
MSNSKALVKKGEEEEQQYVIKPQTTVPSVDTSTWPLLLKNYDKMLVRSGHFTPIPNGSSP
YKRDIKSYISSGVINLDKPSNPSSHEVVAWLKRMLRVEKTGHSGTLDPKVTGCLIVCIDR
ATRLVKAQQGAGKEYVCVIRFHDKVAGGEPAFAKALETLSGALFQRPPLISAVKRQLRIR
TIHESKLIEFDNDRHLGVFWVSCEAGTYIRTLCVHLGLLLGVGAHMQELRRVRSGVMSEE
DGTMVTLHDVLDAQWQYDNGGDETLLRRVIQPLETLLCTYKRLVVKDSAVNAVCYGAKLM
LPGLLRYDPGIEAHEEVVLMTTKGEAIAIGIAQMSTVEISTCDHGVVAKVKRCIMERDLY
PRRWGLGPVAMQKKQLKADGKLDKYGRTNENTPAQWKLSYKDYSAPAPEAQGESAAAAPA
AAPQQEAPAPSSAPASPEKKTEEEKDADGDDGKKKRKKHEGETPEEKAERKRLKKEKKEK
RKSKGKEAEDSE
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgtccaattcgaaggcgcttgtcaagaagggggaggaggaggagcagcaatatgtcatc
aagccgcagacgacggtgccgtcggttgatacgagcacctggcctctgctgctgaagaac
tacgacaagatgcttgtgcggtccggccacttcaccccgatccccaatggctcgtccccg
tacaagcgcgacatcaagtcgtacatttcgagcggtgtcatcaacctcgataagccgtcg
aacccttcgtcgcacgaggttgtcgcttggctgaagcggatgctccgcgttgagaagact
ggtcactccggcactctcgatcccaaggtcactggctgcctgattgtctgcatcgaccgg
gccacccgtctcgtcaaggcccagcagggcgccggcaaggagtacgtttgcgtcatccgg
ttccacgacaaggtggccggcggcgagcccgcctttgccaaggcgctcgagaccctctct
ggtgccctcttccagcgcccgcctctcatctcggccgtcaagcggcagctgcgtatccgc
acgatccacgagagcaagctcatcgagttcgacaatgaccggcacctgggcgtgttctgg
gtctcgtgcgaggcgggcacctacatccgtacgctctgcgtgcacttgggcctgctgctg
ggcgtgggtgcgcacatgcaggagctgcgccgcgtgcgctcgggtgtcatgtcggaggag
gacggcaccatggtgacgctgcacgatgtcctcgacgcccagtggcagtatgacaacggc
ggcgacgaaaccctcctgcgccgcgtcatccagcctctcgagaccctcctgtgcacctac
aagcgcctggttgtcaaggactcggccgtcaacgccgtctgctatggtgccaagctcatg
ctccccggtctgctgcgttacgatcccggcatcgaggcccatgaggaggttgtcctcatg
actaccaagggcgaggccatcgccattggcattgcccagatgagcacggttgagatctcg
acgtgcgaccacggcgtcgttgccaaggtcaagcggtgcatcatggagcgcgacctctac
ccccgccgctggggcctgggtcctgtggctatgcagaagaagcagctcaaggctgacggc
aagctggacaagtacggccgcaccaacgagaacacgcctgcccagtggaagctgagctac
aaggactacagcgcgccggcgcccgaggcccagggcgagagcgcggctgcggctccggcc
gccgcgcctcagcaggaagccccggctccttcttcggcccctgcttctcctgagaagaag
accgaggaggagaaggatgccgatggcgatgacggcaagaagaagaggaagaagcacgaa
ggcgagacccccgaggagaaggccgagcgcaagaggttaaagaaggagaagaaggagaag
aggaagtccaagggcaaggaggccgaggacagcgagtaa

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