Remersonia thermophila: 98126921
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Entry
98126921 CDS
T10833
Symbol
VTJ83DRAFT_5653
Name
(RefSeq) hypothetical protein
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
rthe Remersonia thermophila
Pathway
rthe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
98126921 (VTJ83DRAFT_5653)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rthe03009
]
98126921 (VTJ83DRAFT_5653)
03032 DNA replication proteins [BR:
rthe03032
]
98126921 (VTJ83DRAFT_5653)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
98126921 (VTJ83DRAFT_5653)
Prokaryotic type
98126921 (VTJ83DRAFT_5653)
DNA replication proteins [BR:
rthe03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
98126921 (VTJ83DRAFT_5653)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Pus10_C
Motif
Other DBs
NCBI-GeneID:
98126921
NCBI-ProteinID:
XP_070865028
JGI:
Remth1_5653
LinkDB
All DBs
Position
5:complement(join(1580753..1581218,1581282..1581951,1582016..1582071,1582145..1582431))
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AA seq
492 aa
AA seq
DB search
MSNSKALVKKGEEEEQQYVIKPQTTVPSVDTSTWPLLLKNYDKMLVRSGHFTPIPNGSSP
YKRDIKSYISSGVINLDKPSNPSSHEVVAWLKRMLRVEKTGHSGTLDPKVTGCLIVCIDR
ATRLVKAQQGAGKEYVCVIRFHDKVAGGEPAFAKALETLSGALFQRPPLISAVKRQLRIR
TIHESKLIEFDNDRHLGVFWVSCEAGTYIRTLCVHLGLLLGVGAHMQELRRVRSGVMSEE
DGTMVTLHDVLDAQWQYDNGGDETLLRRVIQPLETLLCTYKRLVVKDSAVNAVCYGAKLM
LPGLLRYDPGIEAHEEVVLMTTKGEAIAIGIAQMSTVEISTCDHGVVAKVKRCIMERDLY
PRRWGLGPVAMQKKQLKADGKLDKYGRTNENTPAQWKLSYKDYSAPAPEAQGESAAAAPA
AAPQQEAPAPSSAPASPEKKTEEEKDADGDDGKKKRKKHEGETPEEKAERKRLKKEKKEK
RKSKGKEAEDSE
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtccaattcgaaggcgcttgtcaagaagggggaggaggaggagcagcaatatgtcatc
aagccgcagacgacggtgccgtcggttgatacgagcacctggcctctgctgctgaagaac
tacgacaagatgcttgtgcggtccggccacttcaccccgatccccaatggctcgtccccg
tacaagcgcgacatcaagtcgtacatttcgagcggtgtcatcaacctcgataagccgtcg
aacccttcgtcgcacgaggttgtcgcttggctgaagcggatgctccgcgttgagaagact
ggtcactccggcactctcgatcccaaggtcactggctgcctgattgtctgcatcgaccgg
gccacccgtctcgtcaaggcccagcagggcgccggcaaggagtacgtttgcgtcatccgg
ttccacgacaaggtggccggcggcgagcccgcctttgccaaggcgctcgagaccctctct
ggtgccctcttccagcgcccgcctctcatctcggccgtcaagcggcagctgcgtatccgc
acgatccacgagagcaagctcatcgagttcgacaatgaccggcacctgggcgtgttctgg
gtctcgtgcgaggcgggcacctacatccgtacgctctgcgtgcacttgggcctgctgctg
ggcgtgggtgcgcacatgcaggagctgcgccgcgtgcgctcgggtgtcatgtcggaggag
gacggcaccatggtgacgctgcacgatgtcctcgacgcccagtggcagtatgacaacggc
ggcgacgaaaccctcctgcgccgcgtcatccagcctctcgagaccctcctgtgcacctac
aagcgcctggttgtcaaggactcggccgtcaacgccgtctgctatggtgccaagctcatg
ctccccggtctgctgcgttacgatcccggcatcgaggcccatgaggaggttgtcctcatg
actaccaagggcgaggccatcgccattggcattgcccagatgagcacggttgagatctcg
acgtgcgaccacggcgtcgttgccaaggtcaagcggtgcatcatggagcgcgacctctac
ccccgccgctggggcctgggtcctgtggctatgcagaagaagcagctcaaggctgacggc
aagctggacaagtacggccgcaccaacgagaacacgcctgcccagtggaagctgagctac
aaggactacagcgcgccggcgcccgaggcccagggcgagagcgcggctgcggctccggcc
gccgcgcctcagcaggaagccccggctccttcttcggcccctgcttctcctgagaagaag
accgaggaggagaaggatgccgatggcgatgacggcaagaagaagaggaagaagcacgaa
ggcgagacccccgaggagaaggccgagcgcaagaggttaaagaaggagaagaaggagaag
aggaagtccaagggcaaggaggccgaggacagcgagtaa
DBGET
integrated database retrieval system