Remersonia thermophila: 98126949
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Entry
98126949 CDS
T10833
Symbol
VTJ83DRAFT_5679
Name
(RefSeq) hypothetical protein
KO
K10981
DNA polymerase IV [EC:
2.7.7.7
]
Organism
rthe Remersonia thermophila
Pathway
rthe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
98126949 (VTJ83DRAFT_5679)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98126949 (VTJ83DRAFT_5679)
Enzymes [BR:
rthe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
98126949 (VTJ83DRAFT_5679)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
98126949 (VTJ83DRAFT_5679)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_lambd_f
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
NTP_transf_2
HHH_5
Motif
Other DBs
NCBI-GeneID:
98126949
NCBI-ProteinID:
XP_070865054
JGI:
Remth1_5679
LinkDB
All DBs
Position
5:complement(join(1682795..1683786,1683873..1684758))
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AA seq
625 aa
AA seq
DB search
MDQAAPSRKRNVSHPTLDFPVILLLSANLTPQELQDLRGQIPTLTDDINEAEVVLGKVFR
KERAQFELRKLGVHTEEVDLSTRPASATPPRKRPRRSSPALVSSDLDSDTASEDEIQKRL
AGPAPVEPTVQVVKLSWFTESVRTGEVLPIHSYIVYNGRRVSQSPSKPSPADRAATVMER
ALADAASQPKSSRPGSSQSGRGATYAAHPVRPALHRQTTSEQKRNAHLPPIPDHLHTTYS
CQRPTPVHPPNEDFIEELERIRAVRTLTGDKIGVRAYSSAIATVAAYPYKFQTSQEVARL
PGCGDKIALLFKEFRDAGRIQEARQQESDPKLAVLKLFYDIWGVAETTARDFYNRGWRDL
DDIVEYGWDTLTRVQQIGVKYYDEFQLKIPRPEVESISETILAHANKMRPGFEMVVVGGY
RRGKAASGDVDVVLSHREESATEYFVERIVVSLEHAGYITHTLSLSTANSERRQQPVEWK
GNDRKAGSGFDTLDKALVVWQDPNWEGQAAAGQSPNPSPGPSHRKKNPNPHRRVDIIISP
WKTAGCAVLGWSSGTTFQRDLRRYCKKELRLKFDSSGIRSRSTGAWVDLESGPDGSPAPD
MLTAERRVFDGLGLEWRPPKERCTR
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggaccaagctgcaccatctcggaagagaaacgtcagccatccgacgcttgacttcccc
gtcatcctcctgctttcggccaacctcaccccccaagagctccaagaccttcgaggtcaa
atacccactctcacagatgacatcaacgaggccgaggttgtcctgggcaaggtattccga
aaggaaagggcccagttcgagttgcggaagctcggggtacacaccgaggaggtggatctg
tcgacgcgccctgcatccgcaacgccgccaaggaaacgcccaaggcgttcctcgcctgct
ctggtcagctcggatctggattcagacacggcatccgaggacgagattcagaagcgccta
gccgggccggccccggttgagccaacggtccaggtcgtgaagctttcctggttcaccgag
tccgtcagaaccggcgaggtgctccctatccacagttatatcgtttacaacggtcgcagg
gtctcccagagcccgtccaagccgtcccctgccgacagagccgccaccgtcatggaacgc
gcccttgcagatgccgccagccagccgaagagctcccggcccggctcgtcacagagcggg
cgcggcgcaacctacgcagcccatcccgtgaggcccgccttgcaccggcagacaacctcg
gagcaaaagagaaacgcccacctgccgccgatacccgatcacctgcataccacctactcg
tgccagcggcccacgccggtgcatccgcccaacgaggacttcattgaggagcttgaaaga
atccgggcggtgaggactctcaccggggataagatcggggtgagggcctactcaagcgcc
atcgctacggtggcagcctatccttacaagtttcagacctcgcaagaggtggcaaggctc
ccagggtgcggtgataagatcgccttgctcttcaaagagttcagagatgcggggcgcatc
caagaagcccggcaacaagagtcggaccccaagcttgccgtgctcaagctcttttatgac
atttggggcgtggccgagacgacagcccgcgacttttacaaccgcggctggcgcgacctc
gacgacattgtcgagtacggctgggacacgctcacgcgcgtgcagcagatcggggtcaag
tactacgacgagttccagctcaagattccgcggccagaggtcgagtccatctccgagacg
atccttgcgcacgcaaacaagatgcgtccgggctttgagatggtcgtcgtcggcggttac
aggcgcggcaaggccgcgagcggcgacgtcgacgtggtcctaagccaccgggaggagagc
gccaccgagtactttgtcgagcgcatcgtcgtcagcctcgagcacgccggctacatcacg
cacacgctctcgctctcgacggccaactcggagcgccgccagcagcccgtcgagtggaaa
ggcaacgaccggaaggccggctcgggcttcgacacgctcgacaaggcgctggtggtgtgg
caggacccgaactgggagggccaagcggcagcgggccagagtccgaacccgagcccgggc
ccgagccatcgcaagaagaacccaaacccccaccgccgcgtcgatatcatcatcagcccc
tggaagacggccgggtgcgccgtgctcgggtggtccagcggaaccacgtttcagcgggac
ctaaggcgttattgcaagaaggagctgcggctcaagtttgacagcagcggcattcgaagc
cgctccacgggggcctgggttgacctggaaagcggcccggacggctccccggcgccggac
atgctgaccgcggaaaggagggtgtttgatgggttggggttggaatggagaccacccaag
gagcggtgcacgaggtag
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