Remersonia thermophila: 98126951
Help
Entry
98126951 CDS
T10833
Symbol
VTJ83DRAFT_5680
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
rthe Remersonia thermophila
Pathway
rthe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
98126951 (VTJ83DRAFT_5680)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rthe03021
]
98126951 (VTJ83DRAFT_5680)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
98126951 (VTJ83DRAFT_5680)
Prokaryotic type
Archaeal type
TFE
98126951 (VTJ83DRAFT_5680)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_6
Zn_SUZ12
DUF4718
Phage_zn_bind_2
zf-C2HC_3
Motif
Other DBs
NCBI-GeneID:
98126951
NCBI-ProteinID:
XP_070865055
JGI:
Remth1_5680
LinkDB
All DBs
Position
5:1686127..1687146
Genome browser
AA seq
339 aa
AA seq
DB search
MEVAQTLLRKVMRAFYSTQEILIIEALVTHSALRDDELAYLMKMNLKDLHRLCAGLRDAR
YLVVHTRPEMQQGKTRPMNRTYYYIDYRQVVDAIKWRCYKADKDMQIAVKPTEEAKEYSC
PRCKAQWSQLEVLDLCSASGFVCQRCSAILEQNKHEETPGHQQLSRMNSQFKFMTDMLQE
IDKVVVPECSFDKAIAVARPVVRDPTHEVAPSVPVDVRTKPDAVKGLANVGPKTMHVTIS
DDAEQERLEEKRRKEHFLKQNALPSWITESSVPAPSSSTSMSMSFSMSDANASSSAVFEA
DDVDRSAKRVKMEDGTGAAPMSFKMEDDDEEEIEFEDVV
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgcccagacgcttctccgcaaggtcatgcgggccttctactcgacccaggag
atcctcatcatcgaggccctggtcacccactcggcgctccgcgatgacgagctggcctac
ctgatgaagatgaacctcaaggacctgcaccgtctgtgcgccggcctccgcgacgcccgc
tacctggtggtccacacgcggcccgagatgcagcagggcaagacgcgccccatgaaccgc
acctactactacatcgactaccgccaggtcgtcgacgccatcaagtggcgctgctacaag
gccgacaaggacatgcagatcgccgtcaagcccaccgaggaggccaaggagtactcgtgc
ccgcggtgcaaggcccagtggtcccagctcgaggtgctggacctgtgctccgccagcggc
ttcgtctgccagcgctgcagcgccatcctggagcagaacaagcacgaggagaccccgggc
caccagcagctgtcgcgcatgaacagccagttcaagttcatgacggacatgctgcaggag
atcgacaaggtggtggtgcccgagtgctcctttgacaaggccatcgccgtggcccgcccc
gtcgtgcgcgatccgacccacgaggtcgcccccagcgtgcccgtcgacgtgcgcaccaag
cccgacgccgtcaagggcctcgccaacgtcggccccaagaccatgcacgtcaccatctcg
gacgacgccgagcaggagcgcctcgaggagaagcgccgcaaggagcacttcctcaagcag
aacgcgctgccgtcgtggatcaccgagagctccgtcccggccccgtcctcgtcgacgtcc
atgtccatgtccttctccatgtccgacgccaacgcctcgtcgtccgccgtgttcgaggcc
gacgacgtggaccgcagcgccaagcgcgtcaagatggaggacgggacgggggccgcgccc
atgagcttcaagatggaggatgacgacgaggaggagattgagtttgaggatgtggtgtag
DBGET
integrated database retrieval system
