Remersonia thermophila: 98127233
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Entry
98127233 CDS
T10833
Symbol
VTJ83DRAFT_5934
Name
(RefSeq) hypothetical protein
KO
K20046
actin cytoskeleton-regulatory complex protein SLA1
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98127233 (VTJ83DRAFT_5934)
Membrane trafficking [BR:
rthe04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
98127233 (VTJ83DRAFT_5934)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
98127233 (VTJ83DRAFT_5934)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_1
SHD1
SH3_9
PH_SLA1
SH3_2
DUF1720
SH3_10
SAM_4
AP1AR
Motif
Other DBs
NCBI-GeneID:
98127233
NCBI-ProteinID:
XP_070865309
JGI:
Remth1_5934
LinkDB
All DBs
Position
5:complement(join(2538067..2538092,2538186..2539310,2539412..2540065,2540128..2540200,2540276..2541619,2541738..2541935))
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AA seq
1139 aa
AA seq
DB search
MGFVGVYKAIYDYAPQGEGELQISEGDLLYIIEKSTEDDWWKAKKKAGADEEEEPVGLVP
NNYVEEAEPQGKARALYEYTRQTDEELSFPEDAQLDVYDTSDPDWILVGHNGDYGFVPAN
YIEMMDGDAKVQEPDEEPPAPTPPPLPARTPAAPAAPAAPAAAPATADVQSPPLPARSPP
SSDSAEDSSSSPAPPNPASMIAGLMAARAGSSHQQPPAPLNLSSHKDASDDDESDSVRSP
PLPARPRGNSQLSPDAARSSRPADRRSRADYETPKTPTAPLTPGDFHMYNINEMVSIMGK
KKKMPTTLGINLRTGIILIAPEYAQDGPSQEWTADKMTHYSREGKHVFMELVKPSKSIDF
HAGAKDTAEEIVAMLGELAGAVRAEGLREVILAGTQKPIQQKKGVVLYDFDAQGDDEVTV
CIGDEVVILDDTKSDEWWMVRRVKNQKEGVVPSSYIEVTGILDTPASSAVVGVNAGKSTV
EQNRLEELRLTKEAIKAAQREDHKERERERTRSEQRSSRRENGSRSEASGSSKSNGKPKP
DPAKVRTWTDRTKSFTVEAQFLGVKDGKFHLHKLNGVRIAVPISKMSLEDLEYVERQTGI
SLDEDKPLSDLKRKSGSARSSAAPAPKVGATVEPKKPEYDWFQFFLACEVSPALCNRYAQ
AFARESMDESVLPDVDASVLRNLGFREGDILKVMRYLDVKYCRGKKAAPGGEEAEGGLFS
GPGGALRNNTRKGRPAPPVETNNTVDAKALAGQREPALQDARACSREGARPSRRRVRSRS
GPAATATAPAEPTPAKLTGAMSDLSLLTKPLEPEKVQPPAPPPALNLAPAPAPAPAPAPA
AATVQVPQPTGATPQFFSGMPLPAVNGQQPQAAVARQRPIPPQYTQGQGGLVPPPPARPF
SAPQVGPPSQFAPPALQPQMTGFAATQVAPPGQSLNDLAQTRLQQQYAQLQQQQQQQQQQ
QPPMMPMMTGMQPGVFIPQPAGVAMPLGAQAVPAQPLQMQPTGFVQPLQLQQPMATGLPP
PLEPQRTAVPGVMGVAPALQLQPTGFAPAAAPMQQPMLQPQPTGLVGAPGMGMAGAVGMA
GVGGGLQAPPLQPLVPHKTGPPPPVKFGIPEGGAKKLAPQPTGRKANLAAATPDNPFGF
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggggttcgtcggcgtgtacaaggccatctacgactacgccccgcagggcgagggcgag
ctgcagatcagcgaaggggacctcctgtacatcatcgaaaagagcacagaagacgactgg
tggaaggccaagaagaaggccggcgccgacgaggaggaggagccggttggcttggttccg
aataattatgtcgaggaggccgagccccaaggaaaggcccgcgctctctacgagtacacc
cgccagaccgacgaggagctgtccttccccgaggatgcccagctggatgtctacgacacg
tcggatcccgactggatcctggtgggacacaatggcgactacggtttcgtgcccgccaac
tacatcgagatgatggatggggatgccaaggtgcaggaacccgacgaggaaccgcccgcg
cccacgcctccgccgctcccggccaggactccggcggccccggccgctcccgccgctccc
gccgccgctcccgccaccgccgacgtccagagcccgccgctgccggctaggagcccgccc
tcctccgactcggccgaagactcgtcctcctcccccgccccgccgaatcccgcttccatg
atcgccggcttgatggccgctcgcgccggctcgtcgcaccagcagcctccggccccgctc
aacctgtcgtcccacaaggacgcgtcggacgacgacgaatccgacagcgtcagatcgccg
ccgctcccggcccggccgcgcgggaactcccagctctccccggacgcggccaggtcctcg
cgccccgccgaccgccgcagccgcgccgactacgagaccccgaaaaccccgacggccccc
ctgacgccgggcgacttccacatgtacaacatcaacgagatggtgtccatcatgggcaag
aagaaaaagatgcccaccaccctcggcatcaacctgcgcaccggcatcatcctgatcgcg
cccgagtacgcccaggacgggccctcgcaggagtggaccgccgacaagatgacgcactac
tcgcgcgagggcaagcacgtcttcatggagctggtgaaaccgagcaagagcatcgacttc
cacgccggcgccaaggacacggccgaggagatcgtcgccatgctcggcgagctggccggc
gccgtgcgcgccgagggcctgcgcgaggtcatcctggccggcacccagaagcccatccag
cagaagaagggcgtcgtcctctacgactttgacgcccagggcgacgacgaggtgacggtc
tgcatcggcgacgaggtggtcattctcgacgacaccaagagcgacgagtggtggatggtg
cgccgcgtcaagaaccagaaggagggcgtcgtcccgagcagctacatcgaggtcacgggc
atcctcgacaccccggcctccagcgccgtcgtcggcgtcaacgccggcaagtcgaccgtc
gagcagaaccgcctcgaagagctccgcctgaccaaggaggccatcaaggcggcccagcgc
gaggaccacaaggagcgcgagcgcgagaggacccgatcagagcagcgcagcagcagacgc
gaaaacggcagccgttccgaagcctcgggctcgtccaagtccaacgggaagcccaaaccc
gatcccgccaaggtccgcacgtggaccgaccgcacaaaatccttcaccgtcgaggcccag
ttcctcggcgtcaaggacggcaagttccaccttcacaagctcaacggcgtgcgcatcgcc
gttcccatctccaagatgtcgctcgaggacctggagtacgtcgagcgccagacgggcatc
tcgctcgacgaggacaagccgctgtccgacctcaagaggaagagcggcagcgcccgctcc
tcggccgcccccgcccccaaggtcggcgcgaccgtcgagcccaagaagcccgagtacgat
tggttccagttcttcctggcctgcgaggtgtcgccggccttgtgcaaccgctacgcccag
gcctttgcgcgcgagtccatggacgagagcgtcctgcccgatgtcgacgcctccgtgctg
cggaacctgggcttccgcgagggcgacatcctcaaggtcatgcgctacctggacgtcaag
tactgccgaggaaagaaggccgccccgggcggagaggaggccgagggcggcttgttctcc
ggccccggaggagccttgcgcaacaacacccggaagggccggccggcgcctcccgtggag
acgaacaacacggtggacgccaaggcgctcgcgggccaaagggagccggccctccaagac
gcccgagcctgctcccgagaaggcgcccgcccctcccgccgccgcgtccgctcccgctca
ggccccgccgccacggccaccgctcccgccgagccgacgccggcgaagctgaccggcgcg
atgtcggacttgtccctgctgaccaagcccctggagccggagaaggttcaaccccccgcc
ccgccgccggccttgaacctggctccagcacctgctccggctccagccccggccccggcc
gctgccaccgtgcaggttccccagcccaccggcgccaccccgcaattcttcagcggcatg
ccgctgccggccgtcaacgggcaacaaccgcaggccgccgtggcccgccaacggcccatc
ccgcctcagtacacccaaggccagggcgggctggtgccgccgcccccggctcgtcccttc
tcggcgccccaggtgggcccgcccagccagttcgcccctccggcgctccagccgcagatg
acgggcttcgcggcgacccaggtcgcgcctcccggccagagcctgaacgacctcgcccag
acaaggctgcagcagcagtacgcccagctgcaacagcaacaacaacagcagcagcagcaa
cagccgccgatgatgcccatgatgacgggcatgcagcccggagtgttcatcccgcagccg
gcgggcgtcgccatgcccctgggcgcgcaggccgtgccggcccagccgctgcagatgcag
cccacgggcttcgtccagccgctgcagctgcagcagcccatggcgacgggcctgcccccg
ccgctggagccgcagcgcaccgccgtgccgggcgtcatgggcgtcgcgccggcgttgcag
ctgcagccgaccgggttcgctcccgccgcggcgcccatgcagcagccgatgctccagccg
cagccgaccgggctcgtcggagcccccggcatgggcatggcgggcgccgtgggcatggcg
ggcgtcggcggcgggctgcaggcgccgcctctgcagccgctcgtgccgcacaagacgggc
ccgccgccgccggtcaagtttggcatccccgaggggggcgcgaagaagttggcgccgcag
ccgacggggaggaaggcgaacttggccgctgctacgccggacaacccgtttggcttctga
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