Remersonia thermophila: 98127274
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Entry
98127274 CDS
T10833
Symbol
VTJ83DRAFT_5971
Name
(RefSeq) hypothetical protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
rthe Remersonia thermophila
Pathway
rthe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
98127274 (VTJ83DRAFT_5971)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rthe03021
]
98127274 (VTJ83DRAFT_5971)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
98127274 (VTJ83DRAFT_5971)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta_N
TFIIF_beta
Tau95
Phage_p2_ORF12
Motif
Other DBs
NCBI-GeneID:
98127274
NCBI-ProteinID:
XP_070865346
JGI:
Remth1_5971
LinkDB
All DBs
Position
5:join(2683035..2683271,2683337..2683601,2683663..2683850,2683907..2684263)
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AA seq
348 aa
AA seq
DB search
MAEPQVKAEPDTGSPFMDDNDEAPDLEFYDKEPASADMYSRMYLTRVPNYVWEAWSKLDD
DAEIEIGTIRQFTDENGKPRLQMRLKPELEVHKEVPKEYEMEVTNHDVNNTFIFTEQDLP
SFAAKNKERAAALAQGIPAHLLRKQQRQLEPTAERGRKGAFARKPIPKKTKIAGKIKHEV
VCTPIPNAEADRFLALRAQAAQEPEKRVKMYNAFLPSGDAKPPQEWEAFLKTKEKPTKAK
KLENKTARWPENQLLDAIARCFSEHKYWSVKAFRGRIPQPEAYIREGLEKVAVLHRTGTF
ANHWSLKPEYQSMVASLPKPADDAAEPQPDAAPSDEEEDEDIKMEDVL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgcaagtcaaggctgagcccgacacgggctcccctttcatggacgacaac
gatgaggcccctgatctcgagttctacgacaaggaaccagccagcgccgacatgtatagc
cgaatgtatctcacacgggtgcccaactacgtctgggaggcctggtcgaagcttgacgat
gatgccgagatcgagatcggcacgattcgtcagtttacggacgagaacggcaagccgaga
ttgcaaatgcgcctcaagcccgagctggaggtgcacaaggaggtccctaaggagtacgag
atggaagtaacgaaccacgacgtcaacaacaccttcatctttacagaacaagacctaccc
agcttcgcggccaagaacaaggagagggcggctgctctggctcagggcatcccggcgcat
ctgctgaggaaacagcagcgacagctggagccgaccgcggagcgcggtcgcaagggcgcc
ttcgcgcgcaaacccatcccgaagaaaaccaagattgccgggaagatcaagcacgaggtg
gtctgcacgccgatccccaacgccgaggccgaccgcttcctggcgctgcgcgctcaggcg
gcccaggaaccagagaagcgcgtcaagatgtacaacgcgttcctcccgtcaggggatgcc
aagccccctcaagaatgggaggcgtttctcaaaaccaaggagaagccgaccaaggccaag
aagctggagaacaagacggcgcgctggcccgagaaccagctgctcgacgccatcgccagg
tgcttctcggagcacaagtactggtccgtcaaggcgttccgcgggaggatcccgcagccc
gaggcgtacatccgcgaaggcttggaaaaggtcgccgtcctgcaccgcaccggcaccttt
gccaaccactggtctctcaagcccgagtaccagagcatggtggcgtcgctgcccaagccg
gcagacgatgcggccgagccccagcccgacgccgcgccatccgacgaggaggaagacgag
gacatcaaaatggaagatgttctgtag
DBGET
integrated database retrieval system
