Remersonia thermophila: 98127307
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Entry
98127307 CDS
T10833
Symbol
VTJ83DRAFT_600
Name
(RefSeq) hypothetical protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
rthe Remersonia thermophila
Pathway
rthe04138
Autophagy - yeast
rthe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
98127307 (VTJ83DRAFT_600)
04148 Efferocytosis
98127307 (VTJ83DRAFT_600)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98127307 (VTJ83DRAFT_600)
Membrane trafficking [BR:
rthe04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
98127307 (VTJ83DRAFT_600)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
TPR_VPS8_2
Beta-prop_VPS8
VPS8_N
zf_RING_Vps8_fungal
TPR_Vps41
Beta-prop_EML
Clathrin
Beta-prop_HPS5
zf-rbx1
zf-RING_UBOX
zf_RING_Vps8
zf-RING_5
PHD_NSD
zf-RING_2
zf-RING_Vps41
zf-RING_11
WD40_CDC20-Fz
zf-C3HC4
PHD
zf-RING_16
Beta-prop_EML_2
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
98127307
NCBI-ProteinID:
XP_070869953
JGI:
Remth1_600
LinkDB
All DBs
Position
1:join(2147406..2147795,2147855..2148293,2148344..2152704)
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AA seq
1729 aa
AA seq
DB search
MSSSRSWEDDDAARAMADDAADQARPDDASASASTSTSPSDEETVKGDRDEDRLADFAED
DQATAPRDPVEPARGRSSVARRYRELLAADDETASASEADRSSAGAAGPELATSPKGSAL
SIPDDTPSVQGSAIPSPGSSLPSSLAIRPGFSSPTPSFRPFDQRFRSRISSPYLSSPRPS
SPASLPGHRRNISLVSQLLLDHADAETPTPPPWEVVRWTKLRKLNGQVFSEAGKRSFGTP
TCLAISAHIVLGTSKGIILVFDYNQTIKMILGPGTKAVESGAITAIAVSADHTTIAGGHE
NGSIFTWDTTRPAKPFLSIPPLDPSHATHRTLDGHVPHVKVTHLGFLGTRHTALVSADDR
GMAFSHLATRGTGPLGRTVKTTRILGRYPGSQPPPGRTLKPSTVLAFASLPLGNVEMASD
AMGLTAMLTPYLLVIVSTTPIAQTQHKSARPKEVAAHSALTGCLAWFPGVKLKVPDPATG
SSISKVKLVYCWSNVLTVLDVDEIPAEDKDKPPGLKFKARSRWKCEEPIVAVQWLSRSVL
TVLTVSQRLMVLEDRSMRMTEAFDLMGKHIYHADLFSRQLSDLVENLDEDDPSMHGVVAD
AFYMSFKAYKGRLFLLGFNDVSIGALSNWADRLIALVDHGDYLGAIKLATSYYTGDANKL
TVGLPEDAASRHAMVRDKLMEIMSASLRYAFGQRQRNPGSVDDAHLQELAETCFAACLAV
GDAGFLFDDAYEWYEEAGVQGVFLETLEPYILDGSVTAVPPVVVKALTAHFAGKGWESRL
EEMICHMDTATLDLDQVTSLCKQHGLYDALLYVWNQALGDFITPFFDLLALLVPLMQDDQ
PSGDAEAEMRAVNALKMFPYLSYILTGRVYPTGEPLAEDAAQKAKSELYWMLFSGKSIQW
PRGSNKRLLTRPGQPQEPSFPYLRLILKFDAASFLSALNEAFEDSFLNESPEKPGIGSAG
RDLPEEQVFGMTVDRQYIASILMEIMNPSDFAARDTIYLDMFIARNLPKYPQYLLFPGST
LTKVLVGLCKYPGPDLAEDAQLSAEYLLSVHQPPDVADLIPLLREAGFFRILKRIYRGDK
QYGKLIETYFEDPEDQKDVFNCIDVYLRPQAGLTRRQVHDIHQAIRQRAAELVDLDPAMA
AATVAKHVPELHRHVLDAVASRPELQHAYLRAILEPEKSGPGAAAGGPADAASLVEEYLR
LMCRFDPEHVAEYVGLVQSSNLRLEQLLPTMEEAGVIDAAVLLMAREGQVQEAMGRLVRH
LETLEAALQGLLAGSRDDAQEREDLQASAEELMQALRKFVLVGIWLCQSQTRTVRASGSG
RRGQKAPLDAALSADEKLWLDLIEIAVQITKRLSSTLQTLPSGPAPAARGDASPPGGRLD
AEKLLALLRSLVQTTFTALLASTSTPGSGRSPSAAAAAAAAAAATAPTGADPDATVATAP
AAIGIGTNLSFLRILRAFLARAAAASPTVADLRGVLSSIFSAYAYEEAMLRLSNRLLERS
LFVGVAEAVELRQRGWRPRGSTCEACGRRVWGPGVQGAGVYEAWEEKRAAEERERVERKR
RLFGERGWGRMGGGAGRSHGGMLAVGGGGGGGEEEAEAEEEEEEEGYTGKGKGKGKEKGK
GKDLSPGRVEESSGSQHRHQHQYQHQHQHQPGAAEDPREGLATGDGRSVISTKREQQQQQ
QQQQQQQPPVLGPLVLLACRHIYHQSCLEALLAKDEFGKEREYRCPIDG
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgagccgttcctgggaggacgatgacgcggcgcgcgccatggccgacgacgca
gcagaccaagcccgacccgacgatgcgagcgccagcgccagcaccagcaccagccccagc
gatgaagaaaccgtcaagggcgaccgggacgaggaccgcttggccgactttgccgaagac
gaccaggccaccgccccccgcgatcctgtcgagccggcgcggggtcgcagctccgtcgcc
cgccggtatcgagagctccttgcggccgacgacgagacggcatcagcgtccgaggcagac
cgcagctcggccggagcggccggccctgagctcgctacgagccccaagggctccgcgctc
tccatacccgacgacacgccctcggtccaaggctcggcaataccctcccccggcagcagc
ctcccctcctcgctcgccatccggcccggattcagcagcccgacgccttcgttccgtccc
ttcgaccagcggtttcggtcccggatctcttcgccgtacctctcttcgccccgcccttcc
tccccggcctccctgccgggccaccgccgaaacatctcgctggtcagccagctgctcctc
gaccatgccgacgccgaaaccccgacgccgcccccgtgggaggtggtgaggtggaccaag
ctgaggaagctcaacggccaggtcttctccgaggccggcaagcggagcttcggcacgccc
acctgcctcgccatctcggcgcacatcgtgctggggacctcaaaaggcatcatcttggtg
tttgactacaaccagaccatcaagatgatcctcggcccggggaccaaagccgtcgagtcg
ggcgccatcacggccatcgcggtatccgcggaccacaccaccatcgccggcgggcacgag
aacggcagcatcttcacctgggacacgacgcgccccgcgaagccgttcctcagcatcccc
cccctcgacccttcccacgcgacgcaccggacgctggacggccatgtcccgcacgtcaag
gtcacccacctgggcttcctcggcacccggcacacggccctcgtgtctgccgacgaccgg
gggatggccttctcgcacctcgccacccgaggaaccggcccgctgggccggaccgtcaag
acgacccggatcctggggcggtacccgggctcccaacccccgcccggccggacgctgaag
cccagcaccgtgctggcctttgcctcgctccctctcggcaacgtggagatggccagcgac
gccatgggcctcacggcgatgctcaccccgtacctcctggtgatcgtctccaccacgccc
atcgcccagacccagcacaagtcggcgcggcccaaggaggtggccgcccacagcgccttg
accgggtgcctggcctggttccccggcgtcaagctcaaggtgcccgacccggccacgggg
agcagcatctccaaggtgaagctggtctactgctggtccaacgtcctgaccgtcctggac
gtcgacgagatccccgccgaggacaaggacaagccgccgggcctcaagttcaaggcgcgg
agccggtggaagtgcgaggagcccatcgtcgccgtgcagtggctgagccggtccgtgctg
acggtgctgaccgtctcccagcgcctgatggtgctggaggaccgaagcatgcgcatgacg
gaggcgttcgacctcatgggcaagcacatctaccacgccgacctgttctccaggcagctc
agcgacctggtcgagaacctcgacgaagacgacccttccatgcacggggtcgtcgccgac
gccttctacatgagcttcaaggcctacaagggccggctgttcctcctcggcttcaacgac
gtctccatcggcgccctgtccaactgggccgatcgcctcatcgccctcgtggaccacgga
gactacctcggcgccatcaagctcgcgacgtcgtactacacgggcgatgccaacaagctc
acggtcgggctgccggaagacgcggcgtcccggcacgccatggtgcgggacaagctgatg
gagatcatgagcgcgtcgctcaggtacgcgtttgggcagcggcagaggaaccccggctcg
gtcgacgacgcgcatctccaggagctggccgaaacgtgcttcgcggcctgcctggccgtc
ggggatgccggcttcctgttcgacgacgcgtacgaatggtacgaggaggccggcgtccag
ggcgtctttctcgagacgctggagccgtacatcctggacggatccgtcacggcggtgccg
cccgtggtggtgaaggccctgacggcgcactttgcgggcaagggatgggagagccggctc
gaggagatgatctgccacatggacacggccacgctggacctggaccaggtcacgtctctc
tgcaagcagcacggcctgtacgatgccctgctctacgtgtggaaccaggcgctcggcgac
ttcatcacgcccttctttgaccttctcgccctcctcgtcccgctcatgcaggacgaccag
ccctcgggcgatgccgaggccgagatgcgcgcggtcaacgccctcaagatgttcccctac
ctctcgtacatcctcacggggcgcgtctatccaaccggcgagccgctggccgaggatgcc
gcgcaaaaggccaaatccgagctctactggatgctgttctcgggcaagagcatccagtgg
ccgaggggcagcaacaagaggttgctcacgcggccgggccagccgcaggagccttcgttc
ccgtatctgaggctcattctaaagttcgacgccgccagcttcctgagcgccctcaacgag
gcgttcgaggactcgtttctcaacgaatcccccgaaaagcccggcatcggcagcgcgggc
cgggacctgcccgaagagcaggtctttggcatgacggtcgacaggcagtacatcgcctcg
atcctgatggagatcatgaacccctccgactttgccgcccgcgacaccatctacctcgac
atgttcatcgccaggaacctccccaaatacccgcaataccttctcttcccgggctcgacg
ctgaccaaggtgctggtcgggctctgcaagtaccccggcccggacctggccgaggatgcg
cagctcagcgccgagtacctgctgtccgtgcaccagcctcccgacgtcgcggatctcatc
ccgctcctcagggaggcgggcttcttccgcatcctgaagcgcatctaccggggcgacaag
cagtacgggaagctcatcgagacctactttgaggaccccgaagaccaaaaggacgtcttc
aactgcatcgacgtctacctgcggccgcaggcgggcctcacgcggcggcaggtgcacgac
atccaccaggccatccggcagcgcgccgcggagctggtcgacctcgaccccgccatggcg
gccgcgacggtggccaagcacgtgcccgagctgcaccggcacgtgctggacgcggtggcg
tcgcgcccggagctgcagcacgcgtacctgagggccatcctcgagccggagaagagcggg
cccggggctgccgccggcggcccggccgacgcggcctccctcgtggaggagtacctccgg
ctcatgtgccggttcgacccggagcacgtggccgagtacgtcgggctggtccagtcgtcc
aacctgcggctggagcagctgctgccgaccatggaagaggcgggcgtgatcgacgcggcg
gtcctcttgatggcgcgggaggggcaggtccaagaggccatggggcgcctggtcaggcat
ctcgagacgctcgaggccgcgctgcagggcctgctggcgggctcccgcgacgacgcccaa
gagcgggaggatctgcaggcctcggcggaggagctgatgcaggcgctgcgcaagttcgtg
ctggtgggcatctggctgtgccagagccagacgaggacggttcgagcctcgggctccggc
cggcggggccagaaggcgccgctcgacgccgcgctctcggcggacgagaagctctggctg
gacctgatcgaaatcgcggtccagatcacgaagcgcctgtcgtcgacgctgcagaccctg
ccgagcggcccggcgccggcggcccgcggagacgccagccctcccgggggccggctcgac
gccgagaagctcctggctctgcttcgctccctcgtccagaccacgttcaccgcgctcctc
gcgtccacctcgacccctggatcaggccggtcgccgtccgccgccgccgccgctgctgcc
gctgctgctgctaccgcgcccaccggcgccgaccccgacgcgaccgtggccacggcgccg
gcggccatcggcatcggcaccaacctctccttcctccgcatcctgcgggcctttctcgcc
cgggccgccgccgcctctcccaccgttgccgacctgcgcggcgtcctctcgtccatcttc
tccgcctacgcctacgaggaggccatgctccggctgtcgaaccggctcctcgagcggtcg
ctgtttgtgggcgtggccgaggcggtggagctgcgccagcgcgggtggcggccgaggggg
tcgacgtgcgaggcgtgcgggaggagggtttgggggcccggcgtgcagggggccggggtg
tacgaggcgtgggaggagaagagggccgccgaggagagggagagagtggagaggaagagg
cggttgtttggggagaggggatgggggaggatgggcggcggagccgggagaagccatggg
ggtatgctggctgtaggtggtggtggtggtggtggtgaggaagaggctgaggctgaggag
gaggaggaggaggagggatatacagggaagggcaagggcaaagggaaagagaaggggaag
gggaaggatttgagccccggaagggtagaggagagcagcgggagccagcaccggcaccag
caccagtaccagcaccagcaccagcatcagccgggggccgccgaggatccgcgcgaggga
ctggccacaggggatgggcggagcgtgatctccacgaagagggagcagcagcagcagcaa
cagcaacagcaacagcagcagccgccggtgctgggaccgctggttttgctggcatgcagg
cacatctaccaccagagctgcctcgaggcgttgctggcgaaggatgagttcgggaaagag
agggagtacaggtgtccgattgatgggtag
DBGET
integrated database retrieval system
