Remersonia thermophila: 98127351
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Entry
98127351 CDS
T10833
Symbol
VTJ83DRAFT_604
Name
(RefSeq) hypothetical protein
KO
K23358
transcription initiation factor TFIID subunit 1, fungi type [EC:
2.3.1.48
]
Organism
rthe Remersonia thermophila
Pathway
rthe03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
98127351 (VTJ83DRAFT_604)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rthe03021
]
98127351 (VTJ83DRAFT_604)
03036 Chromosome and associated proteins [BR:
rthe03036
]
98127351 (VTJ83DRAFT_604)
Enzymes [BR:
rthe01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
98127351 (VTJ83DRAFT_604)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
98127351 (VTJ83DRAFT_604)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
98127351 (VTJ83DRAFT_604)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
zf-CCHC
zf-CCHC_6
Apidaecin
Motif
Other DBs
NCBI-GeneID:
98127351
NCBI-ProteinID:
XP_070869957
JGI:
Remth1_604
LinkDB
All DBs
Position
1:join(2160353..2163405,2163481..2163537,2163610..2163822,2163890..2163998)
Genome browser
AA seq
1143 aa
AA seq
DB search
MANDKEPGRDAPSEDDWKLQEARDDELIRDLQEGVAANSDYLAMFEQGAEIDQTDKAEDA
VDYADIDLSDDELPDEEPATGGAADTADDADDANDANDAEDANDADADADADADADAAAD
DNDLDDLFGENLPSSPAARSDAASSRGSNIAAAAADDDDDNDDGRMQVDDGPRESLEDLI
ALNFDHYPKPSDANQDPNIPPAAETLAEAVKQAFPGFKENAVLDWNELFRPKQAHWISKK
PLKPPRPLVPSKLSLDLDVDQEKLFRISGAAQLTVYQKIREAEARGLVCLEEPEPLEQAD
LDAFNLDDESDAELVGGRTLRDIALVCDDWDAMIRLGDVASDGPDDEPASPPAHADAASD
AMLIKAEFDGDDEAWDRMFLDAEPSKKRRVEIPQGLPPVPRFTAPSFDNFEEATAKLAKR
VILDMNDPYLLIDDIESDRAVKRRKVQHKTVRLANGRVGRELSTRFNFSCDTAYDALKEN
SQSRVRATLASIPVEHSMTAQRLSWPYYKVKLSASDPHSYHRPQFHPRRDAFQTVRFKPP
AVKKKKQLKGKRIAEIFQTSADLTMNDNSSAILFEYCEEIPIVLSNFGMGQKIINYYRRS
KGTDARPEKRELGEPYILMPEDRSPFAMVGQVNPGETVPTLHNQMFRAPIFKHNPRSTDF
LLGRSSTGRGGSAWYLRTIDHLFVVGQTLPSMEVPGPHSRKVTNIAKNRLKMVSYRLLHR
SDNVTLTDITRHVADSNESQNRQKLKEFLVFQKDKRNWVLPEGEELMPESEIRGLVRPEE
VCLLDAMQVGAHELENGGYEVNDAMFKDDDVMEGDELPPDALANKMAPWRLTKAFIDASH
GKAMIAVHGPGDPTGKGLGVSYLRTSMKGGFLEQLHGPLATSADAIERQRKANGGHMYNV
KNQDTLYTESLRDIWNRQKQSLEDAQEHDDDDVLAQEDEDERFNVQNQASQAAHHMGDGV
SQVSQSQASALSWRKLKIVREVRGDNGEIQTVTEIVHDPVVIAQYNKRRRQMEFENIDIY
NVQLTGDPEKDELILEKARIEQERLEKNKERRKKREKQKKLQQKMREGGAASVMGDEDSP
EPTTEKVIGTTRKCANCGQVGHIKTNKKLCPLLNGTRPRDQNPDDTASLGQINAPVAASF
LNL
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggccaacgacaaggagccagggcgcgacgcccccagcgaagacgactggaagctgcaa
gaagcccgcgatgacgagctgattcgggacctccaggagggcgtcgccgccaacagcgac
tacctcgccatgttcgagcagggcgccgagatcgaccagaccgacaaggccgaggacgcc
gtcgactacgccgacattgacctcagcgacgacgagcttcccgacgaagaacctgccacc
ggcggcgctgccgataccgccgatgacgccgacgatgcgaacgatgccaacgacgccgag
gacgccaacgacgccgacgccgacgccgacgccgacgccgacgccgacgccgccgccgat
gacaacgacctcgacgacctctttggcgagaacctcccctcgtcgcccgccgcccgctcc
gacgcggcctcgtcgcggggctccaacattgccgccgccgccgccgacgacgacgacgac
aacgacgacggtcgcatgcaggtggacgacggcccccgcgagtccctcgaggacctcatc
gccctcaactttgatcactaccccaaacccagcgacgccaaccaggaccccaacatcccg
cccgccgccgaaaccctggccgaggccgtgaagcaggcgtttcccggcttcaaggagaac
gccgtgctggactggaacgagctgttccgccccaagcaggcccactggatctccaagaag
cccctcaagcccccgaggcccctggtgccgtccaagctcagcctcgacctcgacgtggac
caggaaaagctgttccgcatctcgggggccgcccagctgaccgtctaccaaaagatccgc
gaggccgaggcccgcggcctcgtctgcctcgaggagcccgagccgctggagcaggccgac
ctggacgccttcaacctcgacgacgagtccgacgcggagctcgtcggcggccgcaccctt
cgcgacatcgccctcgtctgcgacgactgggacgccatgatccgcctcggcgacgtcgcg
agcgacggccccgacgacgagccggcctcgcctcccgcccacgccgacgccgcctcggac
gccatgctcattaaggccgagtttgacggggacgacgaggcctgggaccgcatgttcctc
gacgccgagccctccaagaagcgccgcgtcgagataccgcaggggctcccgcccgtgccg
cgcttcacggcgcccagctttgacaactttgaagaggcgacggccaagctcgccaagcgc
gtcatcctcgacatgaacgacccgtacctgctgatcgacgacatcgagtcggaccgggcc
gtcaagcgccgcaaggtgcagcacaagacggtgcgcctggccaacggccgcgtcggccgc
gagctgtcgacgcgcttcaacttttcgtgcgacacggcctacgacgcgctcaaggagaac
agccagagccgcgtccgcgccaccctggcctccatccccgtcgagcacagcatgacggcc
cagcgcctctcgtggccctactacaaggtcaagctgtcggccagcgacccgcacagctac
caccgcccccagttccacccgcggagggacgccttccagacggtccgcttcaagcccccg
gccgtcaagaagaagaagcagctcaagggcaagcgcatcgccgagatcttccagacctcg
gccgacctcaccatgaacgacaactcgagcgccatcctcttcgagtactgcgaggagatc
cccatcgtgctctccaactttggcatgggccaaaagatcatcaactactaccgccgctcc
aagggcaccgacgcgcggcccgagaagcgcgagctcggcgagccctacatcctgatgccc
gaggaccgctcgcccttcgccatggtcggccaggtcaaccccggcgagacggtgcccacg
ctgcacaaccaaatgttccgcgcccccatcttcaagcacaacccgaggagcaccgacttc
ctcctcggccgcagctccaccggccgcggcggctccgcctggtacctccgcaccatcgac
cacctcttcgtcgtcggccagaccctgccctcgatggaggtgcccggcccccactcgcgc
aaggtgaccaacatcgccaagaaccgcctcaagatggtgtcgtaccgcctgctccaccgc
agcgacaacgtcaccctgaccgacatcacgcgccacgtcgccgactccaacgagtcgcag
aaccgccagaagctcaaggagttcctcgtcttccaaaaggacaagcggaactgggtgctc
cccgagggcgaggagctcatgcccgagtccgagatccgcggcctcgtccgccccgaggag
gtctgcctgctcgacgccatgcaggtcggcgcccacgagctcgagaacggcggctacgag
gtcaacgacgccatgttcaaggacgacgacgtcatggaaggcgacgagctgccccccgat
gccctcgctaacaagatggcaccctggcgcctcaccaaggccttcatcgacgccagccac
ggcaaggccatgatcgccgtccacggccccggcgacccgaccggcaagggcctcggcgtc
agctacctccgcacctccatgaagggcggcttcctcgagcagctgcacgggcccctcgcc
acctcggccgacgccatcgagcgccagcgcaaggccaacggcggccacatgtacaacgtc
aagaaccaggacaccctctacaccgagtccctgcgcgacatttggaaccgccaaaagcaa
agcctcgaggacgcccaagagcacgacgacgacgacgtcctggcccaggaggacgaggac
gagcgcttcaacgtccagaaccaggcctcgcaggccgcccaccacatgggcgacggcgtg
agccaggtcagccaaagccaggcgagcgccctgagctggcgcaagctcaagatcgtccgc
gaggtccgcggcgacaacggcgagatccagaccgtcaccgagatcgtccacgacccggtc
gtcatcgcccagtacaacaagcggaggcgccagatggagtttgaaaacatcgacatctac
aacgttcagcttaccggcgatcccgagaaggacgagctcatcctcgaaaaggcccgcatc
gagcaggagcgtctggaaaagaacaaggagcgtcgtaagaagcgcgagaagcagaagaag
ctccagcaaaagatgcgcgaaggcggcgccgcctccgtcatgggcgacgaggactcgccc
gagccgacgaccgagaaggtcatcggcaccacgaggaagtgcgccaactgtggtcaagtt
ggccatatcaagaccaacaaaaagctgtgcccgctcctcaacggcacccggccgcgtgac
cagaaccccgacgacaccgccagcctgggccagatcaacgccccggtcgcggctagtttc
ctcaacctctga
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integrated database retrieval system
