Remersonia thermophila: 98127485
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Entry
98127485 CDS
T10833
Symbol
VTJ83DRAFT_6160
Name
(RefSeq) hypothetical protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
rthe Remersonia thermophila
Pathway
rthe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
98127485 (VTJ83DRAFT_6160)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rthe04121
]
98127485 (VTJ83DRAFT_6160)
03036 Chromosome and associated proteins [BR:
rthe03036
]
98127485 (VTJ83DRAFT_6160)
Ubiquitin system [BR:
rthe04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
98127485 (VTJ83DRAFT_6160)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
98127485 (VTJ83DRAFT_6160)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
WDR55
F-box-like
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
F-box
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_DCAF4
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_NWD2_C
Beta-prop_RIG_2nd
Beta-prop_LRRK2
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_VPS8
VPS8_N
Spt20_SEP
Motif
Other DBs
NCBI-GeneID:
98127485
NCBI-ProteinID:
XP_070865535
JGI:
Remth1_6160
LinkDB
All DBs
Position
5:join(3369601..3369790,3369925..3372597,3372645..3372928)
Genome browser
AA seq
1048 aa
AA seq
DB search
MAAFNPQPDEGYSEDPLTAPSAVVPFTLKRDDAIIALGSSRFRDDFPPWLVQHISGLPIS
RKTELAMAILNALPTSNVSQIYNGLRLRLHIDFVRYLPPEVCLKILEYLDPVSLINVARC
CRAWHSLALDRQLWEKLYYLEGWRAMASEIAQAEREMNTSSSTPVLRRASSEDDGHTHKR
RAISVSPRADADEDTTMLDAVPCPSRHQPADTSLPGGSIFGGPVVASPPSSLGPPSATSR
SDASGTRPDKGKGKAMASPEPADPPYAKTPFLQTVLDPPRIPRSSLWVWDASSSRHRLNW
KYLYTMRRRLEENWERGKYTNFQFPHPAYPEEGHGECVYTLQFNARYLVSGSRDRTLKVW
DMATRRCLRTLAKHKGSVLCLQFDSDPDEDIIVSGSSDSDVVIWKFSTGKPLQTLKHAHR
ESVLNVRFDKRILVTCSKDKTIKVFNRKPLRHGDLGYREVDPVGTSVNYGYSLPMAPDDY
PVIPAWTIIGNLEGHSAAVNAVQIHEREVVSASGDRHIKVWDWPTQVCVRTIVGHNKGIA
CVQYDGRRIVSGSSDNEVKVFDRQTGLEVANLRAHSNLVRTIQAGFGDLPYSAEDDLAEA
RKVDEEYFKALEAGLLEEQDRRKTGRRPGNAGSRRPEDICAFGAKLPPGGGGGKYGRIVS
GSYDGSIIIWRRDKEGVWKDQHHFRQEAAALAALQQLRNQQQQQQQQQHQQQQQQQQQQQ
QQQQQQPFVPLHPAVHNLGGREALRAMRAPGAGTSTTAPPDTAMAPTAAAAGTSPRPLAP
SGSVPGPNLPPLRSMLSMELAPSETASSPQFLQLRQIMDAAVENGPRALAQAIAAHPAIL
THRSYVEAAIDRQQNPLIRSQLRQAYSSALTRAQFEQALHRREVMRNQEAAATSASSAPP
SHMPAAAPGAAPGAAPGAAAAARQAHVHVPGTPGLHQIPPPAPIPAMATPATPAGTRAAS
RARSRDAPAPAPAPAPAHGHGRPHHPHIAQAPVPFEVHDSANPPRVFKLQYDARRIICCS
QRSVIVGWDFCNGDPELEEAGRFFGHVD
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggctgctttcaacccgcagcctgacgaaggctactcggaagatccattgaccgctccc
tcagccgtggtccccttcaccctgaaacgcgacgacgccatcatcgccttgggctcctct
cgattccgcgacgacttcccgccatggttggtgcagcacatctccggcttgccgatatcc
cgaaagactgaactggccatggccatcctgaacgccctcccgacgtccaacgtctcgcag
atttacaacggcctccgcctccgcctgcacatcgactttgtgcgctacctgcctcccgag
gtctgcctcaagatcctcgagtatctagaccccgtgtcgctcatcaacgtcgcccgatgc
tgccgcgcgtggcacagcctcgccctcgataggcaactctgggagaagctctactatctg
gaaggatggagggccatggccagcgagatcgcccaggccgaacgcgaaatgaacacgtct
tcgtccacccccgtgcttcggcgcgcctcttccgaggacgacgggcatacccacaagagg
cgcgccatctcggtctcgccgagggcggatgccgacgaggacaccaccatgctggacgcc
gtgccgtgtcccagccgccaccagccggccgacaccagcctcccaggcggcagcatcttc
ggaggacccgtcgtggcctccccgccgtcgagcctcgggcctccgagcgcgacgtcgaga
tccgacgcgagcggcacgcggccggacaagggaaaggggaaggcgatggcctcgccggag
ccggcggatccgccctacgcgaagacgccattcctccaaaccgtcctggatccgccgcgg
atcccccggtcgagcctgtgggtatgggacgcgtcgtcgtctcggcatcgcctcaactgg
aagtacctctacacgatgcggcggcggctcgaggagaactgggaacgcggcaagtacacc
aactttcagttcccccacccggcctatcccgaagagggccacggcgaatgcgtctacacc
ctgcagttcaatgcgcgctatctcgtgagcggcagcagagaccggacgctgaaggtgtgg
gacatggcgacccggcggtgcctgcgtaccctggccaagcacaaagggtccgtcctgtgc
ctgcagttcgattcggatcccgacgaggatatcatcgtgtcgggcagctccgactcggat
gtggtcatctggaagttctcgaccggcaagccgctccagacgctcaagcacgcgcaccgc
gagtcggtgctcaacgtgcgctttgacaagcgcatcctcgtgacgtgctccaaagacaag
accatcaaggtcttcaaccgcaagccgctccggcacggcgacctcgggtatcgggaggtg
gatccggtagggaccagcgtcaactacggctacagcttacccatggcccccgacgattac
cccgtcataccggcttggaccatcattggcaacctcgagggccacagcgccgccgtcaac
gccgtgcagatccacgagcgcgaggtggtgtcggcgagcggagaccggcacatcaaggtc
tgggactggccgacgcaggtctgcgtccgaaccatcgtcggccacaacaagggcatcgcg
tgcgtgcaatacgacggccggcgcatcgtcagcgggagcagcgacaatgaagtcaaggtg
tttgatcgccagacggggctcgaggtggccaacctgcgcgcgcactccaacctggtgcga
accattcaagccggctttggcgacttgccgtacagcgccgaggacgacctcgccgaggcg
aggaaggtcgacgaggagtacttcaaggcgctcgaggcgggcctcctcgaagagcaagac
cgccggaagacggggcggcggccgggcaacgccggatctcggcggcccgaggacatttgc
gccttcggagccaagctgccgcccggcggcggaggtggaaagtatgggcgaatcgttagc
ggcagctacgacggcagcatcatcatctggcggagagacaaggagggggtctggaaggat
cagcatcacttccgacaggaggcggcggccctcgcagcgctccagcagctccggaaccaa
caacagcaacaacagcagcaacaacatcagcagcagcagcagcagcagcaacagcagcaa
cagcagcaacagcagcagcctttcgtgccgttgcacccggcggtccacaaccttggcggc
cgagaagccctccgggcgatgagggccccaggagcaggtacctcgacaacggcgccgcca
gacaccgcaatggcaccgacggcggccgcggccggcacgagcccgcggccgctagcaccg
agcggctctgtaccagggccgaacctgccgccgctccgcagcatgctctccatggagctg
gctccctcggaaaccgccagctcgccgcagttcctgcagctgcgccagatcatggacgcc
gccgtcgagaacggaccgcgcgctctggcccaggccatcgcggcgcacccggccatcctc
acccaccgatcctatgtcgaggcggccatcgaccgccagcaaaaccccctcatcaggagc
cagctgcggcaggcgtactcgagcgccctcacgcgggcgcagtttgagcaagctctgcac
cggcgcgaggtgatgcgcaatcaagaagcggccgcgacgtcggcatcctcggcgccgccg
tcgcacatgccggcagcggcaccgggggcggcaccgggggcggcaccgggggcagcggcg
gcggcacgtcaggcacacgtgcacgtccccggaacgcccggcctgcatcagatcccgcct
cctgctcccatcccggccatggccacccctgcgacgccggcaggcacccgcgccgccagc
cgggcacgcagccgggatgcccccgcccccgcccccgcccccgcccccgcccatggccat
ggccgcccgcaccacccacacatcgcgcaggcgccggtcccctttgaggtgcacgactcg
gccaacccgccgcgcgtgttcaagctgcaatacgacgcgcggcgcatcatctgctgcagc
cagcgcagcgtcatcgtcggatgggacttttgcaatggggatccggagctggaggaggcg
ggtcggtttttcgggcatgtggattaa
DBGET
integrated database retrieval system
