Remersonia thermophila: 98127549
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Entry
98127549 CDS
T10833
Symbol
VTJ83DRAFT_6218
Name
(RefSeq) hypothetical protein
KO
K10865
double-strand break repair protein MRE11
Organism
rthe Remersonia thermophila
Pathway
rthe03440
Homologous recombination
rthe03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
98127549 (VTJ83DRAFT_6218)
03450 Non-homologous end-joining
98127549 (VTJ83DRAFT_6218)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rthe03032
]
98127549 (VTJ83DRAFT_6218)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98127549 (VTJ83DRAFT_6218)
DNA replication proteins [BR:
rthe03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
98127549 (VTJ83DRAFT_6218)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
98127549 (VTJ83DRAFT_6218)
BRCA1-C complex
98127549 (VTJ83DRAFT_6218)
NHEJ (non-homologous end-joining)
MRX complex
98127549 (VTJ83DRAFT_6218)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Motif
Other DBs
NCBI-GeneID:
98127549
NCBI-ProteinID:
XP_070863845
JGI:
Remth1_6218
LinkDB
All DBs
Position
6:complement(join(144067..144950,145003..146229,146328..146343))
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AA seq
708 aa
AA seq
DB search
MPQESDPDTIRILVSTDNHVGFEERDPIRKDDSWRTFDEVMQLAQTRDVDMVLLAGDLFH
DNRPSRKAMYQVMRSLRKNCLGMKPCELEFLSDPAEVFEGAFPHVNYQDPDINISIPVFS
IHGNHDDPSGDGHYCSLDLLQVAGLVNYFGRVPEADNIHVKPILLQKGKTKLALYGISNV
RDERMHRTFRDNKVRFYRPSQQKSDFFNLLALHQNHYAHTATSYLPENMLPDFLDLVIWG
HEHECLIDPQRNPETGFHVMQPGSSVATSLVPGEAVTKHVAILSITGKTFEVEKIPLKTV
RPFVTREITLANDKRFKGLEKKQDNRQDITKRLMLIVEEMIEEANAKWRSLHGDEIDEDE
GQPLPLIRLKVEYTAPEGTKYEVENPQRFSNRFAGKVANQNDVVYFYRKKTTATRKIKAE
LPAGVSEALDSTDALKVDTLVQEFFAQQSLKILPQAPFGDAVHQFVSKDDKYAVELFVMD
SLSTQVKGLLQLDDEKISEGLDAHIDDFRKNMEKNFVSGQLKQAQRKRRFKEKPDGWDSD
REGHWTAQPQAVEEVPASPGPGAGNGRSDDDGMSVDEPIAQAASTRRSATSSRATRGTTA
AKKAAPAAKKVTAARKAPARGRKKAGPFEDDEDDDVIMDDDEMDPPRPPPPKAPPARATR
SSAPKTRQTTLSFSQKPKTSQKAIEISDDEISEDDAFESMPATRRRRK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggaatcagacccggatacgatccggatccttgtctcgacggacaaccatgtc
ggattcgaggagcgcgacccaatccgtaaggatgacagctggcggacgtttgacgaagtc
atgcagctcgctcagacccgggatgtcgacatggtccttctcgctggggacctctttcac
gacaaccggccatcacgcaaggccatgtaccaggtcatgcgctcgcttcgaaagaactgt
ctcgggatgaagccctgcgagcttgagtttttgagcgaccccgccgaagtcttcgagggc
gcctttccccatgtcaactatcaagatcccgacatcaatatctccatccccgtcttctcg
atccacggaaaccacgacgacccgagtggcgacggccactactgctctctggacttgctc
caggtcgctggtctcgtcaactatttcggtcgcgtcccggaagccgataatatccacgtt
aagcccatcctgctccagaagggaaagaccaagcttgctctgtacggcataagtaatgtc
agggatgagcggatgcaccggacatttagggacaacaaggtccggttctatcgtccaagc
cagcaaaagtctgactttttcaacttgttggccctccaccagaaccattacgcacacacg
gcaaccagctacctgcccgagaatatgctgccggacttcctggatctcgtcatctggggc
cacgagcatgaatgcctgatcgatccccagcgaaacccggaaactgggtttcacgtcatg
cagcccggatcgtccgtggcgacttccctcgtccccggtgaggctgtcaccaagcacgtt
gctatcctcagcatcactgggaaaacgttcgaggtggagaagattccgctaaagaccgtt
cggccgttcgtcacgcgggagattaccctggccaacgacaaacgcttcaagggcttggag
aagaagcaagacaaccgccaggatatcacgaagaggctcatgttgattgtggaggagatg
attgaggaggccaacgcaaagtggcggtctcttcacggcgacgagatagacgaagatgag
ggtcagccgctgccgttgattcggctcaaggtggaatacacggcccctgaggggacaaag
tacgaggtcgaaaatccgcaacgcttttcgaacagatttgccggaaaagttgcgaatcag
aatgacgtggtttacttctacaggaagaaaacaacagcaacacggaaaatcaaggcggaa
ctcccggctggtgtttccgaggcgctcgattcgacggatgccttaaaggtcgacactctg
gtgcaggagttcttcgcccaacagtcgctcaagattctgccgcaagcaccgttcggagat
gccgtccaccagttcgtcagcaaggacgacaagtacgcggtggagctgtttgtgatggac
tcgctttctacccaggtcaagggactgttacagctggacgacgagaagattagcgaagga
ctcgacgcccatattgacgatttccggaagaacatggagaagaattttgtctctgggcaa
ctgaagcaggctcagcggaagcggcggttcaaggagaagccagacggctgggattccgac
cgggagggtcattggaccgcgcaaccgcaagcggttgaggaagtccccgcgtctccagga
cctggggcgggtaacggtcgcagtgacgacgatgggatgtccgtggacgaacctatcgcg
caggccgcttccaccaggcgatcagccacatcatcgcgagccaccaggggtacaaccgcg
gccaagaaggcagctccggcggcaaagaaagttacggcggcgaggaaagccccagcacgc
ggccgcaagaaggccggaccgtttgaggacgatgaggatgatgatgttatcatggacgac
gacgagatggatccgccacggccaccgcctcctaaggcaccaccagcccgagcgacgcga
tccagcgctcccaagactcggcagaccacgctcagcttttcacagaaaccaaagacctca
cagaaggcaattgagattagcgacgacgagatatcggaggatgatgcctttgagtcgatg
cctgcgacacgacgcaggcgtaagtga
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integrated database retrieval system
