Remersonia thermophila: 98127593
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Entry
98127593 CDS
T10833
Symbol
VTJ83DRAFT_6258
Name
(RefSeq) hypothetical protein
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98127593 (VTJ83DRAFT_6258)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
98127593 (VTJ83DRAFT_6258)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GEN1_C
XPG_I
XPG_N
Motif
Other DBs
NCBI-GeneID:
98127593
NCBI-ProteinID:
XP_070863885
JGI:
Remth1_6258
LinkDB
All DBs
Position
6:complement(join(267740..268368,268442..268635,268750..268840,268891..270378,270490..270626,270723..270736))
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AA seq
850 aa
AA seq
DB search
MGIKGIYKEIGPGDRIALCKLAIDTLERTGRPLRIAIDFSIWQFQVQAARGGSNPAIRTL
FYRLVRLLGLAIHPIFVFDGPHKPAFKRNKRSSGRGDMVSTAMAKRLIRLFGFAMHDAPG
EAEAECALLEQQGVVDAVLSEDVDTIMFGCRRTLRNWSAEGKGSKTPTHVSMYEADKVAA
GPSGLDREGMVLVALMSGGDYLPDGIPGCGVKVAVEAAKAGFGRDLCRLKRADRDGLDAW
KQRLVHELRTNESGFFRTRHKALEIPESFPNMEVLRYYTHPVVSREAAVERLKREFPQPS
NLDILGLREFVRETFDWSFRIGAVKLIRVLAPSLLVQRFLDRHGSADGQSADVERRKAQE
GDLVKAITSRRVHASTDATPELRISFTPADIVKLDLDSEPVEEEGEGYGRSGIALNSDDE
FENEAGEEVGDGDRAKASSVKKPFDPLQPELVWIPETLARLGIPLAVEDWEARQQAKGLR
AGAKGTRKGRATKATGMPAGALDKYVKVTKKVAEGASTKPDAPPRKLVSPPQAVAQPEPP
TPAKGRSSRGRQPLDARKLTSQSQDHKPHFLFLLITGNNRDGDDDDNDNNNINNYTGQHW
SLEPPEHDALAHAATTERIPRNGETINLKLSRPRGRWLAAIAQRPLTLFGRVTKNVASSS
KPAPASATHQQPEPIEILSDSDDEFPNLLDPKSRPLPARKTATVATGPSPNLPSRAGSPT
KDPPPPSSLPLPAAAVPSAQEKPRHPASSATATAASASAWPAREGDKKKKKGEGQGTTKV
FIPRTSLAGEGLFAELEVPRDEADAILEAYNGARPDADASRRTGPTAAAATRKKAFRLSE
IEVLDLTGED
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaaaggcatctacaaagaaatcggtcctggtgaccgcattgctctttgcaaa
ctcgccatcgacacgctggaaagaactggtcggcctcttcgaatcgccattgacttttcc
atatggcagtttcaagtgcaagccgcccggggtggctccaaccccgccatccgcaccctc
ttctaccgcctcgtccgcctcctcggcctggccatccaccccatttttgtctttgacggg
ccccataagcccgccttcaagcgcaacaagcgctcctccgggcgcggcgacatggtctcc
acggccatggccaagcgcctgatccggcttttcggcttcgccatgcacgacgcgcccggc
gaggccgaggcggagtgcgcgctgctcgagcagcagggcgtggtggacgcggtgctgagc
gaggacgtggacaccatcatgtttgggtgccgcaggacgctgaggaactggtcggccgag
gggaaagggtccaagacgccgacgcacgtttccatgtacgaggcggacaaggtggcggcg
gggccgagcgggctggatcgggaggggatggtgctcgtggcgctgatgagcgggggggat
tacctccccgatgggattcccgggtgcggagtcaaggtggccgtggaggcggccaaggcg
gggttcggccgggacctgtgccggcttaagagggccgaccgggacgggctggatgcgtgg
aagcagaggctggttcacgagctgcggacgaacgagagcggcttctttcggacccggcat
aaggcgttggagatcccggagagcttccctaacatggaggtgctccggtactacacgcac
ccggtcgtgtcccgcgaggcagcggtggagcggctgaagagggagtttccgcagccgagc
aacctcgacatccttggcctgagggagtttgttcgcgagacgttcgactggtcgtttcgg
atcggcgcggtcaagctgatacgcgtcctggcgccgagcttgctggtgcagcggttcctc
gacaggcacggatcggcggatgggcaaagcgcggatgtcgagcggaggaaagcacaggag
ggtgacttggtgaaggccatcacgagcaggcgggtccatgccagcacggacgcgactcct
gagctgcgcatatccttcaccccggccgacatcgtcaagctggatcttgacagcgagccg
gtggaagaggagggggaagggtacggccggagcggcatcgctttgaacagcgatgacgag
ttcgagaacgaggctggcgaagaagtcggcgacggtgaccgcgcgaaggcttcgagcgta
aagaagccgttcgaccccctgcagccggagctcgtttggatccccgagacgcttgcgagg
ctggggataccgctggcggtggaggactgggaggcccggcagcaggcaaaggggttgagg
gccggcgccaaagggacccgaaaggggagggctaccaaagccacggggatgccggccggc
gccctcgacaagtacgtcaaggtcaccaaaaaggtggccgagggagcgtccacgaaaccc
gacgcgccgccccggaagctcgtctcgcctccacaagccgtcgcccaacccgaaccgccc
acgccggccaagggaagaagctcccgcgggcgtcaacccctggacgctcgcaagctcaca
agccagtcccaggaccacaaaccccatttcctcttcctccttatcacaggcaacaaccgc
gacggcgacgacgacgacaacgacaacaacaacatcaacaactacaccggccaacactgg
tcactcgagcccccggaacacgacgccctcgcccacgctgctaccactgaaagaatcccc
cgaaatggcgaaacgatcaacctcaagctctcaaggcctcggggaagatggctcgcggca
atcgcccagcggcccctcaccctttttggccgagtcaccaagaacgtcgctagctcgtcc
aaaccggccccggcgtctgcgacgcaccagcagccggagcccatcgagatcctctccgac
agcgacgacgagtttcccaatctgctggatccgaaaagccggcccctccctgcccgcaag
accgccacggtcgcgaccggtccgagcccgaacctccccagccgggctggctccccgacc
aaagacccgccgccgccttcgtcgctcccgcttcccgccgcggcggtcccctccgcccag
gagaagccgcggcaccccgcgtcgtcggcaacggccaccgccgcatccgcatccgcttgg
cccgcgagggagggggacaagaagaaaaagaagggcgaggggcagggaacgaccaaggtc
ttcatcccgcgcacctcgctcgccggggagggcctcttcgccgagctcgaggtcccccgg
gacgaggccgacgccatcctggaggcttacaacggcgcccggcccgatgccgatgcgtcc
cggaggaccgggccgacggcggcggcggcgacaaggaagaaggccttccgcctcagcgag
atcgaggtgctggacctgaccggggaggattag
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