Remersonia thermophila: 98127664
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Entry
98127664 CDS
T10833
Symbol
VTJ83DRAFT_6321
Name
(RefSeq) hypothetical protein
KO
K17908
autophagy-related protein 18
Organism
rthe Remersonia thermophila
Pathway
rthe04136
Autophagy - other
rthe04138
Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
98127664 (VTJ83DRAFT_6321)
04136 Autophagy - other
98127664 (VTJ83DRAFT_6321)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98127664 (VTJ83DRAFT_6321)
03029 Mitochondrial biogenesis [BR:
rthe03029
]
98127664 (VTJ83DRAFT_6321)
Membrane trafficking [BR:
rthe04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
98127664 (VTJ83DRAFT_6321)
Mitochondrial biogenesis [BR:
rthe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
98127664 (VTJ83DRAFT_6321)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_Prp19
ANAPC4_WD40
WD40_CDC20-Fz
Beta-prop_RSE1_2nd
Beta-prop_HPS5
WDR55
Beta-prop_Vps41
B-prop_COPA_B_2nd
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
98127664
NCBI-ProteinID:
XP_070863948
JGI:
Remth1_6321
LinkDB
All DBs
Position
6:join(529248..529463,529540..530678,530749..530797)
Genome browser
AA seq
467 aa
AA seq
DB search
MSAASLNFVTFNQDHTCMAVASSKGFRIYHTDPFSKIFNSDEGNISSVEMLFSTSLVAFV
RTPRHLVVQNTKRGSIICELTFPTAVLAVRLNRKRMAVVLEEEIYLYDISNMGLLHTIAT
SPNPNAIFSLSPSSERCYMAYPMPKARDDQNDRRPSHAPPPPLYVPPTSGEVVIFDTDTG
KAVNIIEAHRSPLSHVALNKDGTMVATASETGTIIRVFSVPGGRKLFQFRRGTIPSSISC
MSFNMSGTLLCVSSATETVHIFRLAGAQDSSPAAPALPEPDGRPSLDASRSNRWSRSRSF
DSAQDSPSSNTDSSPRREERPEPAAAGRRLSGTLGGLIRRSSQMVGRSVAGAVGSYLPQS
VTEMWEPQRDFASIKIPKPNSGAAGKLASAALGGGGGGGAAAAAASGAPLRSVVAMSNSS
PNLMVAASDGNFYVFHIDLTHGGEGVLVRQYSLLDRNDKMEASGYGS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgcatccctcaatttcgtcaccttcaaccaggaccacacgtgcatggcggtg
gcctcgagcaaaggcttccgcatctaccacaccgaccccttctccaagatcttcaacagc
gatgagggcaacatctcgagcgtcgagatgctcttctcgacctcgctggttgcctttgtc
cgcaccccgcgacatctcgtcgtccaaaacacaaagcgcggctccatcatctgcgagctc
accttccccactgccgtgctcgccgtccgcctgaacaggaagcgcatggccgtcgtgctc
gaggaggagatctacctctacgacatctccaacatgggcctcctccacaccatcgccacc
tcgcccaaccccaacgccatcttctccctgtccccctcctcggaacgctgctacatggcc
taccccatgcccaaggcccgcgacgaccagaacgaccgccgtccctcgcacgccccgccc
ccgcccttgtacgtccctcccacctcgggcgaggtcgtcatcttcgacaccgacacgggc
aaggccgtcaacatcatcgaggcccaccgctcgcccctctcccacgtcgctctcaacaag
gacggcaccatggtcgccaccgcctccgagaccggcaccatcatccgcgtcttctccgtc
cccggcggccgcaagctcttccagttccgccgcggcaccatcccctcctccatcagctgc
atgtccttcaacatgagcggcaccctgctgtgcgtctcctccgccaccgagaccgtccac
atcttccgcctcgccggcgcccaggattcgtcccccgccgcccccgccctgcccgaaccg
gacggccggccctccctcgacgcctcccgctccaaccgctggtcccgctcccgcagcttc
gacagcgcccaggactcccccagcagcaacaccgattcctccccgcgccgcgaggagcgt
cccgaacccgccgccgcgggtcggcgcctgagcggcacgctcggcggcctgatccgccgc
tcgtcgcagatggtcggccgcagcgtcgccggagccgtgggctcgtatctcccgcagtcg
gtcacggagatgtgggagccccagcgcgatttcgccagcataaaaattcccaagccgaac
agcggcgccgcggggaagctggcgtctgcggcgctcggcggcggcggcggcggcggcgct
gctgctgctgctgctagcggagcgccgctcaggagcgtggtggccatgtccaacagctcg
ccgaacctgatggtggcggccagcgacggcaacttttacgtctttcacattgatttgacg
cacggtggggagggggtcttggtgaggcagtattccctcctggaccggaacgataagatg
gaagcctccgggtacggctcctag
DBGET
integrated database retrieval system
