Remersonia thermophila: 98127690
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Entry
98127690 CDS
T10833
Symbol
VTJ83DRAFT_6345
Name
(RefSeq) hypothetical protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rthe03009
]
98127690 (VTJ83DRAFT_6345)
Enzymes [BR:
rthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
98127690 (VTJ83DRAFT_6345)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
Pre-60S particles
Helicases
98127690 (VTJ83DRAFT_6345)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
98127690
NCBI-ProteinID:
XP_070863972
JGI:
Remth1_6345
LinkDB
All DBs
Position
6:complement(join(622895..624628,624719..624940))
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AA seq
651 aa
AA seq
DB search
MAPEQTRRKAPRSWDALTPPLAQWILDYLSSMGYEQPTPVQKSCLDIFRGNKDVVVEAVT
GSGKTLAFLIPVVEKLLRSGEPAKRHHVQGIIITPTRELASQIHTVLVSMIKFHAPSADL
LRYAKDDEKRPATTEPVIVPQLLVGGTTKAAEDLSTFLRLSPNLLVGTPGRLAELLSSPH
VKAPSSSFEVLVMDEADRLLDLGFSPELTRILGYLPKQRRTGLFSASLSEAVERLITVGL
LYPHKITVRVKSLKDGGVVEERKTPMSLSMTYLVTPASHKIPALCQLLEKLDPRPQRSIV
FFSTCFAVKYFAKVLHGILPPGFSIASLHGKLEPQVREKNYERFVNATSPTVLLTTDVAA
RGLDIPQVDLVVQHDPPTDTKVFIHRCGRAGRAGRRGLAVVLLQPGREEGYVQLLDVRQT
PIVPLERPAVQVEPAQADAVADAIRAKARADREVFQLAQRAFVSWTRSYLEHQATSIFRV
ADLDWVDLAKGYGLLELPKMPEVRGLDRSLGLGIDTEAIPFRDKQREKKRLEELDKWKKE
KAEREAAGGDAAAGQKRKKNEAWSGQKEQEDARAARREKKRRKREAQRLANMTEKEKEEQ
KKLEELIEQVRKKNLEDGATKPATTTKKSGGGGGSRVDNDEDEDEFSGFDD
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggaacagacccgtcgcaaggcgccccgctcgtgggacgccctcacgccacct
cttgcccaatggatccttgactacctatcttcgatgggctatgagcagcccacccccgtg
caaaagtcctgtctggacatcttccggggcaacaaggacgtcgtcgtcgaggccgtcacg
ggcagcggcaagacattggcctttttgatccctgttgtcgagaaactcttgcgctccggt
gagcccgcgaaacgtcaccacgtccagggcatcatcatcacgcccacccgcgagctcgcc
tctcagatccacaccgtcctcgtgtccatgatcaagttccacgccccctccgccgacttg
ctgcgctacgccaaggacgacgagaagcgccctgccacgacggagcccgtcatcgtgccc
cagctgctggtcggcggcacgaccaaagccgccgaggacctgagcacgttcctccgcctg
tcccccaacctcctcgtcggcaccccgggtcgccttgctgaattgctatcgagccctcac
gtcaaagccccgtcctcgtccttcgaggtgctcgtcatggacgaggccgaccgcctcctg
gacctcggcttttcgcccgagctcacccgcatcctgggctacctgcccaagcagcgtcga
accggcttgtttagcgcctccctgagcgaagcggtcgagcgcctcatcacggtcggcctg
ctgtacccgcacaaaatcacggtgcgcgtcaagagcctcaaggacggcggcgtcgtcgag
gagcgcaaaacccccatgtcgctcagcatgacgtacctcgtcacccccgcgagccacaag
atccccgccctatgccagctgctcgagaagctcgacccgcgtccccaacgctccatcgtc
ttcttctccacctgcttcgccgtcaagtactttgccaaggtgctccacggaatcctgccc
ccgggcttctccatcgcgtcgctccacggcaagctcgaaccccaggtgcgcgagaagaac
tatgagcgcttcgtcaacgccacctcccccaccgtcctcctcaccaccgacgtcgccgct
cgcggcctcgacattccccaggtcgacctcgtcgtgcagcacgacccgcccaccgacacc
aaggtcttcatccaccgctgcggccgcgccggccgcgccgggcgccgcggcctcgccgtc
gtcctgctccagccggggcgcgaggaagggtacgtccagctcctcgacgtgcgccaaacg
cccatcgtcccgctcgagcgccccgccgtccaggtcgagcccgcccaggcggatgccgtc
gccgacgcgatccgcgccaaggcccgcgcggacagggaggtgttccagctcgcgcagcgc
gcctttgtcagctggacaagaagctacctggagcaccaggccacgtccatcttccgcgtc
gccgacctcgactgggtcgacctcgccaaggggtacggcctgctcgagctgcccaagatg
cccgaggtgcggggcctcgaccggtcgttgggcctgggcatcgacacggaagccatccca
ttccgcgacaagcaacgcgagaagaagcgtcttgaggagctggacaagtggaagaaggag
aaggcggaacgcgaggctgcgggcggcgatgcggcggccgggcagaagcgcaagaagaac
gaggcgtggagcgggcagaaggaacaggaagatgccagggcggcgaggagagagaagaag
aggaggaagcgggaggcgcagcggttggcgaacatgacggagaaggagaaggaggagcag
aagaagctggaggagctgatcgagcaggtgaggaaaaagaacctggaggacggggccaca
aagccggcgacaacaacgaagaagagcgggggtggaggtggtagcagggtggataatgat
gaggatgaggatgagttctctggttttgatgactag
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integrated database retrieval system
