Remersonia thermophila: 98127772
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Entry
98127772 CDS
T10833
Symbol
VTJ83DRAFT_6419
Name
(RefSeq) hypothetical protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98127772 (VTJ83DRAFT_6419)
04121 Ubiquitin system [BR:
rthe04121
]
98127772 (VTJ83DRAFT_6419)
Enzymes [BR:
rthe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
98127772 (VTJ83DRAFT_6419)
Membrane trafficking [BR:
rthe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
98127772 (VTJ83DRAFT_6419)
Ubiquitin system [BR:
rthe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
98127772 (VTJ83DRAFT_6419)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
Prok-RING_4
zf-RING_UBOX
HypA
Cytochrom_CIII
zf-RING_16
zf-RING_4
Zn_ribbon_LysW
DUF7560
DUF7117
Zn_ribbon_NrdR
Zn_ribbon_6
Motif
Other DBs
NCBI-GeneID:
98127772
NCBI-ProteinID:
XP_070864046
JGI:
Remth1_6419
LinkDB
All DBs
Position
6:complement(join(861158..862351,862421..862534))
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AA seq
435 aa
AA seq
DB search
MDDHSNRDEMYCHACHHQWQRDGESMDCPACNSPSTEIIDPEYDPRHFHGRRHETSVPGA
PEPQQRPTSTAESRPGPATTTPAQHPENAATESSTANTTNTTNSAAPQTQTQSQEPPRVT
FRFRTINWPPVTYFSFVVPPVSAPAPAPAPAPENPSPTAESNAPLTQNAAPAQNAMPPTG
NASQGPGGFELFGINFVPLFHFVPFVPTGNNTGAGEPNPAAQQTPTHHTQPQPQPQPQQQ
QQQQQQQQPHSQPQPGQQTPPTFSPIPVQLLATLIAALANPAAGGVFGDAVYTQEAFERI
LTQLREQSPQGGAPPASQKALDRLRAREVVLDEATLKTARFHDPRCVVCVEDMAVGDRAV
VLPCEHLFHGDCVRPWLELHGTCPVCRKSVEVDDEAEGKEVVKDVQEGSQGQGPGPAPQQ
QQHEAAAGGEAMDCA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccattcgaatcgcgatgagatgtattgccatgcatgccatcatcagtggcag
cgcgatggcgagagcatggactgccctgcctgcaacagcccgtctaccgaaattatcgac
ccggagtatgacccgcgtcacttccacggccggcgacatgaaacttcggtccctggcgct
cccgagccacagcagcgacctaccagcacagccgaatcccgaccggggcctgcgaccacc
acacccgcgcagcaccccgagaatgcggcaaccgagtcgagcacggcgaacacgacgaac
acgacgaacagcgcagccccgcaaacacagacacagtcgcaggagccaccccgcgtcacg
ttccggttccgcaccattaactggcctcctgtaacctacttcagctttgtggtgcctcct
gtctcggctccagcgccggccccagctccggctccagagaatccctcgcctaccgctgag
agcaatgctccgctcacccaaaacgctgcgccagctcagaatgccatgccgcccaccgga
aacgcctcacaaggccccggaggattcgagctcttcggcatcaacttcgtccccctcttc
cacttcgtcccgttcgttccgaccggcaacaacactggcgcaggtgagcccaacccggcc
gcccagcaaacacccacccaccacacccagcctcagccgcaaccccagccgcaacagcag
cagcagcagcagcagcagcagcaaccccattctcaaccccagcctgggcaacagacgccc
ccaactttctcgccaatccccgtccagctgctcgccacgctcatcgccgccctcgccaac
cccgctgcgggtggcgtctttggtgacgctgtctatacacaagaggcgtttgagcgcatt
cttacacagctccgcgagcaatccccgcaaggcggcgcgccgccggcgtctcagaaagcg
ctcgaccggctgcgggcgcgcgaggtggtgttagacgaggcaaccctgaagacggcacgc
ttccatgacccgcgctgcgtggtgtgcgtcgaggatatggctgtgggcgatcgcgcggtc
gtgttgccgtgcgagcatctctttcatggggactgcgtgaggccgtggttggagttgcat
gggacgtgcccggtgtgtcggaagtcggtggaggtggatgatgaggcggaggggaaggag
gtggtcaaggatgtgcaggagggctcacaggggcaggggccggggccggcgccgcagcag
cagcaacacgaggcggcggcgggcggggaagcgatggattgtgcgtga
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