Remersonia thermophila: 98127823
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Entry
98127823 CDS
T10833
Symbol
VTJ83DRAFT_6465
Name
(RefSeq) hypothetical protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
rthe01009
]
98127823 (VTJ83DRAFT_6465)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98127823 (VTJ83DRAFT_6465)
04131 Membrane trafficking [BR:
rthe04131
]
98127823 (VTJ83DRAFT_6465)
03036 Chromosome and associated proteins [BR:
rthe03036
]
98127823 (VTJ83DRAFT_6465)
Enzymes [BR:
rthe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
98127823 (VTJ83DRAFT_6465)
Protein phosphatases and associated proteins [BR:
rthe01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
98127823 (VTJ83DRAFT_6465)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
98127823 (VTJ83DRAFT_6465)
Membrane trafficking [BR:
rthe04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
98127823 (VTJ83DRAFT_6465)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
98127823 (VTJ83DRAFT_6465)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arb2-like
Hist_deacetyl
New_glue
Motif
Other DBs
NCBI-GeneID:
98127823
NCBI-ProteinID:
XP_070864092
JGI:
Remth1_6465
LinkDB
All DBs
Position
6:complement(join(1009671..1010053,1010112..1010379,1010460..1010523,1010623..1012165,1012223..1012256))
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AA seq
763 aa
AA seq
DB search
MDDIDNDVVMDDPTTAEDTSFPSASTTTTTATTTTTNGRSGAGTSGQPDDEEQDPTEYPE
HLRRRGILPTGCCYDDRMKLHANADFGPNPHHPEDPSRIEYIMKTFKKAGLVFTGSDAEL
LRIIQTNPTKYMWRIPAREATKEEICTVHHPGHYMWVEALSRKSTQELRELSMRMDQGRD
SLYVGSMTYEASLISAGGAIETCKSVVSGVVKNAFAVIRPPGHHAEFDAPMGFCLFNNVP
IAAKICQADYPDLCRKILILDWDVHHGNGIQNLFYDDPNILYISLHVYRNGEFYPGKPDN
PMTPDGGLEHCGAGPGLGKNVNIGWHDQGMGDGEYMAAFQKIVMPIAHEFNPDLVIISAG
FDAAAGDELGACFVSPACYAHMTHMLMSLAGGKVAVCLEGGYDLEAISKSALAVAQTLMG
EPPPKMEIPRISREAAKVLAKVQAYQAPYWECMRAGVVDVQEMQAQGSSRLHDVVRRAQR
QVLSEKHGMLPLYIQRDVLFKSFENQVLVTRGIQGARKILMIVHDPPELHAQPDPIDNSL
EPHNAWVTDGVTRYVDWAVEKGFGVIDVNVPHYITHPEDTDSFTPRADERTIQAQVQELM
CYLWDNYLQLYDQVEDIILVGVGNAYLGVKVLLINRLDVKSRVAGVVNFVNGSLRPVKSD
VDSDLSAWYKEHSQVYVANDHACWADPDLTRKVMKRRFGNVIRSQANGLSAMMAEHFSDV
QQFILERVSFEEPGEEEMAEENHGGGGGGGGSGGAAASGRRTG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggacgacatcgacaacgatgttgtcatggatgatccgacgacggcggaggacacgtcg
ttccccagcgccagcacaaccaccaccaccgccaccaccaccacgaccaacggccggagc
ggggccggcacctccgggcagccggacgatgaggagcaggaccccaccgagtatccggag
catctgcgccggcgcggcatcttgccgacggggtgctgctacgacgaccggatgaagctc
cacgccaacgccgacttcgggcccaacccgcaccacccggaggacccgtcgcgcatcgag
tacatcatgaagacgttcaagaaggcgggcctcgtctttacggggtccgacgccgagctc
ctccgcatcatccagaccaacccgaccaagtacatgtggaggatcccggcccgcgaggcc
accaaggaggagatctgcaccgtccaccacccgggccactacatgtgggtggaggccctg
tcgcgcaagtcgacgcaggagctgcgcgagctgtcgatgcgcatggaccaagggcgcgac
tcgctgtacgtcggcagcatgacgtacgaggcgtcgctcatctcggccggcggcgccatc
gagacgtgcaagagcgtcgtgtcgggcgtcgtcaagaacgccttcgccgtcatccggccc
cccggccaccacgccgagttcgacgcgcccatgggcttctgcctgttcaacaacgtgccc
atcgccgccaagatctgccaggccgactacccggacctgtgccgcaagatcctgatcctc
gactgggacgtgcaccacggcaacggcatccagaacctgttttacgacgaccccaacatc
ctctacatttcgctgcacgtgtaccgcaacggcgagttttacccgggcaagcccgacaac
cccatgacgcccgacggcggcctcgagcactgcggcgccgggcccgggctgggcaagaac
gtcaacattggctggcacgaccagggcatgggcgacggcgagtacatggcggcgttccaa
aagatcgtcatgcccatcgcgcacgagttcaacccggacctggtcatcatctcggccggc
ttcgacgccgccgcgggcgacgagctgggcgcctgcttcgtgtccccggcctgctacgcc
cacatgacgcacatgctcatgtccctcgccggcggcaaggtggccgtctgcctcgagggc
ggctacgatctcgaggccatctccaagtcggccctggccgtggcccagaccctcatgggc
gagccgcccccgaagatggagatcccgcgcatcagccgcgaggccgccaaggtcctggcc
aaggtccaggcgtaccaggcgccctactgggagtgcatgcgcgccggcgtcgtcgacgtc
caggagatgcaggcccagggctcgtcgcgcctgcacgacgtcgtccgccgcgcccagcgc
caggtgctctcggagaagcacggcatgctgccgctctacatccagcgtgacgttttgttc
aagtcgtttgagaaccaggtgctggtgacgcgcggcatccagggcgccaggaagatcttg
atgatcgtccacgatccccccgagcttcacgcgcagcccgacccgatcgacaattcgctc
gagccgcacaacgcatgggtgacggacggcgtgactcgctacgtcgactgggccgtcgaa
aagggctttggcgtcatcgacgtcaacgtgccgcactacatcacgcatcccgaggacacc
gactcgttcacgccgcgggccgacgagcgcacgatccaggcgcaggtccaggagctcatg
tgctacctctgggacaactacctgcagctgtacgaccaggtcgaggatatcatcctggtc
ggcgtgggcaacgcctacctgggcgtcaaggtgctcctgatcaaccgactcgatgtcaaa
tcccgcgtcgccggcgtcgtcaactttgtcaacggctccctgcggcccgtcaaatccgac
gtggattcggacctgtcggcctggtacaaggagcattcgcaagtctacgtggccaacgac
cacgcgtgctgggccgacccggacctgacgcgcaaggtcatgaagcgccgcttcggcaac
gtcatccggtcgcaggccaacgggctcagcgccatgatggccgagcacttttcggacgtg
cagcagttcatcctggagagggtgagctttgaggagccgggcgaggaggagatggccgag
gagaatcatggtggtggcggcggtggtggtggtagcggcggggcggctgcgtcgggaagg
aggaccgggtag
DBGET
integrated database retrieval system
