KEGG   Remersonia thermophila: 98127855
Entry
98127855          CDS       T10833                                 
Symbol
VTJ83DRAFT_6494
Name
(RefSeq) hypothetical protein
  KO
K14290  exportin-1
Organism
rthe  Remersonia thermophila
Pathway
rthe03008  Ribosome biogenesis in eukaryotes
rthe03013  Nucleocytoplasmic transport
rthe03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    98127855 (VTJ83DRAFT_6494)
   03008 Ribosome biogenesis in eukaryotes
    98127855 (VTJ83DRAFT_6494)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    98127855 (VTJ83DRAFT_6494)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rthe03019]
    98127855 (VTJ83DRAFT_6494)
   03009 Ribosome biogenesis [BR:rthe03009]
    98127855 (VTJ83DRAFT_6494)
   03016 Transfer RNA biogenesis [BR:rthe03016]
    98127855 (VTJ83DRAFT_6494)
   03036 Chromosome and associated proteins [BR:rthe03036]
    98127855 (VTJ83DRAFT_6494)
Messenger RNA biogenesis [BR:rthe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     98127855 (VTJ83DRAFT_6494)
Ribosome biogenesis [BR:rthe03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    98127855 (VTJ83DRAFT_6494)
  Pre-60S particles
    98127855 (VTJ83DRAFT_6494)
Transfer RNA biogenesis [BR:rthe03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    98127855 (VTJ83DRAFT_6494)
Chromosome and associated proteins [BR:rthe03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     98127855 (VTJ83DRAFT_6494)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N mTOR_dom Vac14_Fab1_bd Pre-PUA BID
Other DBs
NCBI-GeneID: 98127855
NCBI-ProteinID: XP_070864121
JGI: Remth1_6494
LinkDB
Position
6:join(1099351..1099416,1099488..1099517,1099596..1099668,1099737..1099808,1099873..1100594,1100659..1101418,1101508..1101978,1102068..1102866,1102944..1103181)
AA seq 1076 aa
MPVSIEELDATVRAFYEGRGEQQKAAQAALNQFKEDPDAWLMVDEILSRATYEQTKFLGL
QVLDNVIMTRWKVLPREQCQGIRNFVVQYILQCSSSEESLRAHRTLLNKLNLVLVSVLKQ
EWPHNWPTFINEIISACHSSLSVCENNMIILRLLSEEVFDYSAEQMTSTKTRNLKSTMCA
EFSQIFQLCQEILNSATQPSLIKATLETLLRFCNWIPLGYIFETPLIDTLRSRFLEVPEF
RNVTLQCLTEIGGLQTGGPGQINSYDEQLVKMFTEVLTSISNIIPLEMDLKSTYPQSNSR
DQEFIQNLALFLCNFFTVHLPLIENLPNRDFLTHGHYYLIRISQIDDREIFKICLDYWLK
LVQELYEEMMNLPIAEMKPLALGSGGGGAPNPAILANYPLRKHKYNEVLSNLRVVMIEKM
VRPEEVLIVENDEGEIVREFVKETDTVQLYKTIRECLVYLTHLDVVDTEQIMTEKLARQV
DGSEWSWHNCNVLCWAIGSISLAMNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNI
MYIVGQYPRFLKAHWKFLKTVVNKLFEFMHESHEGVQDMACDTFIKIAKSCRRHFVALQP
SENEPFIEEIIKNLAKITCDLTPQQVHTFYEACGYMVAAQGDKNLRVRLLEQLMAIPNAA
WDEIIKQATINPAILQDAETIKIIGNIMKTNVSACSSIGTYFYPQIGRLYSDMLSMYAAT
SQLISEAVAREGEIATKMPKVRGLRTIKKEILKLVEIFVEKSEDPQAIRTDMVPQLLDSV
LVDYNRNVPGARDAEVLKAMTAIITKLQGHMEDQVPVIMENVFECTLDMINKDFSEFPEH
RVEFFNLLRAINLHCFPALLKMDNRQFKFVIDSCLWASKHDNRDVETAGLNMCLELINNI
AEKTDSQTCNAFFQQFFIPILQDVFFVLTDQDHKAGFKTQSLLLMRMFFFVSPADGSQPK
ITGPIFEASQVPPGTGNREFLGGFVSTLLQNAFANLTPVQVTQFVESLFSFNTQYDKFRL
ALRDFLISLREFAGDNAELYQVEKEQQERDARAADIERRSKVSGLLKPSELEDEEL
NT seq 3231 nt   +upstreamnt  +downstreamnt
atgcccgtctccatcgaggagctggacgcgaccgtccgagccttctatgaaggccgcggc
gagcagcaaaaagctgcgcaagccgctttgaaccagttcaaggaagaccccgatgcctgg
ctgatggtcgacgagatcctttcgagggcgacatacgagcagaccaaattcctgggtttg
caggttctcgacaacgttatcatgacgaggtggaaggtgttgccacgggagcaatgtcaa
ggaatccgcaactttgtcgtgcagtacatactgcagtgctccagctccgaggagtccctc
cgcgcgcatcgtaccctcctcaacaagctgaacctggtgctcgtctcggtgctcaagcag
gaatggccgcacaactggccgaccttcatcaacgaaatcatctcggcctgccactcgagc
ttgtcggtctgcgagaacaacatgatcatccttcgcctcctctcggaggaggtgtttgac
tactcggccgagcagatgacgtcgaccaagacgcgcaacctcaagtccaccatgtgcgcc
gagttctcgcagatcttccagctctgccaggagatcctcaacagcgccacgcagccgagc
ctcatcaaggccaccctcgagaccctcctgcgcttctgcaactggatccccctcggctac
atcttcgagacgcccctcatcgacaccctgcggtcacggttcctcgaggtgcccgagttc
cgcaacgtcaccctccagtgcctgaccgagatcggcggcctgcagacgggcggccccggc
cagatcaactcgtacgacgagcagctcgtcaagatgttcaccgaggtcctgacctccatc
tcgaacatcattcccctcgagatggacctcaagtcgacgtacccgcaaagcaactcgcgg
gaccaagagttcatccagaacctggccttgtttctgtgcaacttcttcacggtgcacctg
ccgctcatcgagaacctgccgaaccgtgacttcttgacccacggccactactacctgatc
cgcatctcccagatcgacgaccgcgagatcttcaagatctgcctcgactactggctcaag
ctcgtccaggagctctacgaagagatgatgaacctgcccatcgccgagatgaagccgctg
gcgctcggcagcggcggcggcggcgccccgaaccccgcgatcctggccaactacccgctt
cgcaagcacaagtacaacgaggtgctgtccaacctgcgcgtcgtcatgatcgagaagatg
gtgcgccccgaggaggtgctgatcgtcgagaacgacgagggcgagatcgtccgcgagttc
gtcaaggagacggacacggtccagctctacaagacgatccgcgaatgcctcgtctacctg
acccacctcgacgtcgtcgacacggagcagatcatgaccgagaagctggcccgccaggtg
gacggctccgagtggtcctggcacaactgcaacgtgctctgctgggccatcggctccatc
tcgctggccatgaacgaggagacggagaagcgcttcctcgtcaccgtcatcaaggacctg
ctgggcctcaccgagatgaagcgcggcaaggacaacaaggccgtcgtggccagcaacatc
atgtacatcgtcggccagtacccgcgcttcctcaaggcccactggaagttcctcaagacg
gtcgtcaacaagctgtttgagttcatgcacgagtcgcatgaaggcgttcaggatatggcg
tgcgacaccttcatcaagattgccaagtcgtgcaggcgccattttgtggccctccagccg
agcgagaacgagccttttatcgaggagatcatcaagaacctcgccaagatcacatgcgac
ctgaccccccagcaggttcacaccttttacgaggcgtgcggctacatggtggccgcccag
ggggataagaacctgagggtgcgcctgctcgagcagctcatggcgatccccaacgccgcc
tgggacgagatcatcaagcaggccaccatcaaccccgccatcctgcaggacgccgagacg
atcaagatcatcggcaacatcatgaagaccaacgtgtccgcctgctcgtccatcggcacc
tacttttacccccagatcggccgcctttacagcgacatgctgtccatgtatgccgccacg
agccagctcatctcggaggcggtggcgcgcgaaggcgagattgcgaccaagatgcccaag
gtccgcggcctccggaccatcaagaaggagatcctcaagctggtcgagatctttgtcgaa
aagtcggaggacccgcaggcgatccggaccgacatggttccgcagcttctcgactctgtc
ttggtcgactacaaccgcaacgtccctggcgcccgcgacgccgaggtgctcaaggccatg
acggccatcatcaccaagctccagggccacatggaggaccaggtgcccgtcatcatggag
aacgtgttcgagtgcacgctggacatgatcaacaaggacttttccgagttccccgagcac
cgcgtcgagttcttcaacctgctgcgcgccatcaacctgcactgcttccccgcgctcctc
aagatggacaaccggcagttcaagtttgtcatcgactcgtgcctgtgggccagcaagcac
gacaaccgggatgtggagacggccggccttaacatgtgcctggagctgatcaacaacatc
gccgagaagacggactcgcagacgtgcaacgcctttttccagcagttcttcatcccgatc
ctgcaagacgtcttcttcgtcctcacggaccaggaccacaaggccgggttcaagacgcag
tcgctgctgctcatgcgcatgttctttttcgtgtcgccggccgacgggtcgcagcccaag
atcacgggccccatcttcgaggcgagccaggtgccgccgggcacgggcaaccgcgagttc
ttgggcggctttgttagcaccctgctgcagaacgcgtttgccaacctgaccccggtccaa
gtcacccagttcgtcgagagcctcttcagcttcaacacgcagtacgacaagttccggctg
gcgctgcgcgacttcctcatttcgctccgcgagttcgcgggcgacaatgccgagctgtac
caggtggagaaggagcagcaggagcgcgacgcgcgggcggccgacatcgagcgccgctcc
aaggtgagcgggttgctcaagccgtcggagctggaggacgaggagttgtga

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