Remersonia thermophila: 98127855
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Entry
98127855 CDS
T10833
Symbol
VTJ83DRAFT_6494
Name
(RefSeq) hypothetical protein
KO
K14290
exportin-1
Organism
rthe Remersonia thermophila
Pathway
rthe03008
Ribosome biogenesis in eukaryotes
rthe03013
Nucleocytoplasmic transport
rthe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
98127855 (VTJ83DRAFT_6494)
03008 Ribosome biogenesis in eukaryotes
98127855 (VTJ83DRAFT_6494)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
98127855 (VTJ83DRAFT_6494)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98127855 (VTJ83DRAFT_6494)
03009 Ribosome biogenesis [BR:
rthe03009
]
98127855 (VTJ83DRAFT_6494)
03016 Transfer RNA biogenesis [BR:
rthe03016
]
98127855 (VTJ83DRAFT_6494)
03036 Chromosome and associated proteins [BR:
rthe03036
]
98127855 (VTJ83DRAFT_6494)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
98127855 (VTJ83DRAFT_6494)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
98127855 (VTJ83DRAFT_6494)
Pre-60S particles
98127855 (VTJ83DRAFT_6494)
Transfer RNA biogenesis [BR:
rthe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
98127855 (VTJ83DRAFT_6494)
Chromosome and associated proteins [BR:
rthe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
98127855 (VTJ83DRAFT_6494)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Vac14_Fab1_bd
Pre-PUA
BID
Motif
Other DBs
NCBI-GeneID:
98127855
NCBI-ProteinID:
XP_070864121
JGI:
Remth1_6494
LinkDB
All DBs
Position
6:join(1099351..1099416,1099488..1099517,1099596..1099668,1099737..1099808,1099873..1100594,1100659..1101418,1101508..1101978,1102068..1102866,1102944..1103181)
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AA seq
1076 aa
AA seq
DB search
MPVSIEELDATVRAFYEGRGEQQKAAQAALNQFKEDPDAWLMVDEILSRATYEQTKFLGL
QVLDNVIMTRWKVLPREQCQGIRNFVVQYILQCSSSEESLRAHRTLLNKLNLVLVSVLKQ
EWPHNWPTFINEIISACHSSLSVCENNMIILRLLSEEVFDYSAEQMTSTKTRNLKSTMCA
EFSQIFQLCQEILNSATQPSLIKATLETLLRFCNWIPLGYIFETPLIDTLRSRFLEVPEF
RNVTLQCLTEIGGLQTGGPGQINSYDEQLVKMFTEVLTSISNIIPLEMDLKSTYPQSNSR
DQEFIQNLALFLCNFFTVHLPLIENLPNRDFLTHGHYYLIRISQIDDREIFKICLDYWLK
LVQELYEEMMNLPIAEMKPLALGSGGGGAPNPAILANYPLRKHKYNEVLSNLRVVMIEKM
VRPEEVLIVENDEGEIVREFVKETDTVQLYKTIRECLVYLTHLDVVDTEQIMTEKLARQV
DGSEWSWHNCNVLCWAIGSISLAMNEETEKRFLVTVIKDLLGLTEMKRGKDNKAVVASNI
MYIVGQYPRFLKAHWKFLKTVVNKLFEFMHESHEGVQDMACDTFIKIAKSCRRHFVALQP
SENEPFIEEIIKNLAKITCDLTPQQVHTFYEACGYMVAAQGDKNLRVRLLEQLMAIPNAA
WDEIIKQATINPAILQDAETIKIIGNIMKTNVSACSSIGTYFYPQIGRLYSDMLSMYAAT
SQLISEAVAREGEIATKMPKVRGLRTIKKEILKLVEIFVEKSEDPQAIRTDMVPQLLDSV
LVDYNRNVPGARDAEVLKAMTAIITKLQGHMEDQVPVIMENVFECTLDMINKDFSEFPEH
RVEFFNLLRAINLHCFPALLKMDNRQFKFVIDSCLWASKHDNRDVETAGLNMCLELINNI
AEKTDSQTCNAFFQQFFIPILQDVFFVLTDQDHKAGFKTQSLLLMRMFFFVSPADGSQPK
ITGPIFEASQVPPGTGNREFLGGFVSTLLQNAFANLTPVQVTQFVESLFSFNTQYDKFRL
ALRDFLISLREFAGDNAELYQVEKEQQERDARAADIERRSKVSGLLKPSELEDEEL
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtctccatcgaggagctggacgcgaccgtccgagccttctatgaaggccgcggc
gagcagcaaaaagctgcgcaagccgctttgaaccagttcaaggaagaccccgatgcctgg
ctgatggtcgacgagatcctttcgagggcgacatacgagcagaccaaattcctgggtttg
caggttctcgacaacgttatcatgacgaggtggaaggtgttgccacgggagcaatgtcaa
ggaatccgcaactttgtcgtgcagtacatactgcagtgctccagctccgaggagtccctc
cgcgcgcatcgtaccctcctcaacaagctgaacctggtgctcgtctcggtgctcaagcag
gaatggccgcacaactggccgaccttcatcaacgaaatcatctcggcctgccactcgagc
ttgtcggtctgcgagaacaacatgatcatccttcgcctcctctcggaggaggtgtttgac
tactcggccgagcagatgacgtcgaccaagacgcgcaacctcaagtccaccatgtgcgcc
gagttctcgcagatcttccagctctgccaggagatcctcaacagcgccacgcagccgagc
ctcatcaaggccaccctcgagaccctcctgcgcttctgcaactggatccccctcggctac
atcttcgagacgcccctcatcgacaccctgcggtcacggttcctcgaggtgcccgagttc
cgcaacgtcaccctccagtgcctgaccgagatcggcggcctgcagacgggcggccccggc
cagatcaactcgtacgacgagcagctcgtcaagatgttcaccgaggtcctgacctccatc
tcgaacatcattcccctcgagatggacctcaagtcgacgtacccgcaaagcaactcgcgg
gaccaagagttcatccagaacctggccttgtttctgtgcaacttcttcacggtgcacctg
ccgctcatcgagaacctgccgaaccgtgacttcttgacccacggccactactacctgatc
cgcatctcccagatcgacgaccgcgagatcttcaagatctgcctcgactactggctcaag
ctcgtccaggagctctacgaagagatgatgaacctgcccatcgccgagatgaagccgctg
gcgctcggcagcggcggcggcggcgccccgaaccccgcgatcctggccaactacccgctt
cgcaagcacaagtacaacgaggtgctgtccaacctgcgcgtcgtcatgatcgagaagatg
gtgcgccccgaggaggtgctgatcgtcgagaacgacgagggcgagatcgtccgcgagttc
gtcaaggagacggacacggtccagctctacaagacgatccgcgaatgcctcgtctacctg
acccacctcgacgtcgtcgacacggagcagatcatgaccgagaagctggcccgccaggtg
gacggctccgagtggtcctggcacaactgcaacgtgctctgctgggccatcggctccatc
tcgctggccatgaacgaggagacggagaagcgcttcctcgtcaccgtcatcaaggacctg
ctgggcctcaccgagatgaagcgcggcaaggacaacaaggccgtcgtggccagcaacatc
atgtacatcgtcggccagtacccgcgcttcctcaaggcccactggaagttcctcaagacg
gtcgtcaacaagctgtttgagttcatgcacgagtcgcatgaaggcgttcaggatatggcg
tgcgacaccttcatcaagattgccaagtcgtgcaggcgccattttgtggccctccagccg
agcgagaacgagccttttatcgaggagatcatcaagaacctcgccaagatcacatgcgac
ctgaccccccagcaggttcacaccttttacgaggcgtgcggctacatggtggccgcccag
ggggataagaacctgagggtgcgcctgctcgagcagctcatggcgatccccaacgccgcc
tgggacgagatcatcaagcaggccaccatcaaccccgccatcctgcaggacgccgagacg
atcaagatcatcggcaacatcatgaagaccaacgtgtccgcctgctcgtccatcggcacc
tacttttacccccagatcggccgcctttacagcgacatgctgtccatgtatgccgccacg
agccagctcatctcggaggcggtggcgcgcgaaggcgagattgcgaccaagatgcccaag
gtccgcggcctccggaccatcaagaaggagatcctcaagctggtcgagatctttgtcgaa
aagtcggaggacccgcaggcgatccggaccgacatggttccgcagcttctcgactctgtc
ttggtcgactacaaccgcaacgtccctggcgcccgcgacgccgaggtgctcaaggccatg
acggccatcatcaccaagctccagggccacatggaggaccaggtgcccgtcatcatggag
aacgtgttcgagtgcacgctggacatgatcaacaaggacttttccgagttccccgagcac
cgcgtcgagttcttcaacctgctgcgcgccatcaacctgcactgcttccccgcgctcctc
aagatggacaaccggcagttcaagtttgtcatcgactcgtgcctgtgggccagcaagcac
gacaaccgggatgtggagacggccggccttaacatgtgcctggagctgatcaacaacatc
gccgagaagacggactcgcagacgtgcaacgcctttttccagcagttcttcatcccgatc
ctgcaagacgtcttcttcgtcctcacggaccaggaccacaaggccgggttcaagacgcag
tcgctgctgctcatgcgcatgttctttttcgtgtcgccggccgacgggtcgcagcccaag
atcacgggccccatcttcgaggcgagccaggtgccgccgggcacgggcaaccgcgagttc
ttgggcggctttgttagcaccctgctgcagaacgcgtttgccaacctgaccccggtccaa
gtcacccagttcgtcgagagcctcttcagcttcaacacgcagtacgacaagttccggctg
gcgctgcgcgacttcctcatttcgctccgcgagttcgcgggcgacaatgccgagctgtac
caggtggagaaggagcagcaggagcgcgacgcgcgggcggccgacatcgagcgccgctcc
aaggtgagcgggttgctcaagccgtcggagctggaggacgaggagttgtga
DBGET
integrated database retrieval system