KEGG   Remersonia thermophila: 98127858
Entry
98127858          CDS       T10833                                 
Symbol
VTJ83DRAFT_6497
Name
(RefSeq) hypothetical protein
  KO
K14005  protein transport protein SEC31
Organism
rthe  Remersonia thermophila
Pathway
rthe04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    98127858 (VTJ83DRAFT_6497)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rthe04131]
    98127858 (VTJ83DRAFT_6497)
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rthe02044]
    98127858 (VTJ83DRAFT_6497)
Membrane trafficking [BR:rthe04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    98127858 (VTJ83DRAFT_6497)
Secretion system [BR:rthe02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   98127858 (VTJ83DRAFT_6497)
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_Prp19 WD40 Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR19_1st WDR55 EIF3I MIOS_WD40 TPR_Sec16 WD40_MABP1-WDR62_1st SRA1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_RIG_1st Beta-prop_WDR90_POC16_2nd TFIIIC_delta WDR90_beta-prop_4th DUF4987
Other DBs
NCBI-GeneID: 98127858
NCBI-ProteinID: XP_070864124
JGI: Remth1_6497
LinkDB
Position
6:complement(join(1111883..1111927,1112015..1112543,1112612..1112828,1112890..1113070,1113132..1113338,1113452..1114277,1114372..1115616,1115745..1115950))
AA seq 1151 aa
MVRLREIPRTAAFAWSPGPVPILVTGTRSGAVDADFSDETKLELWDLHLDAQDQSLELQP
IAGISTESRFYDIAWGAPSDDHPRGVIAGAMEDGALQLWDAAKLLAGEEALLSRDVKHTG
PIKALQFNPLRPQVLATAGAKGELFVWDVNDTSTAFRLGTAAAHDIDCVAWNRKVSNILA
TGSAGGFVTVWDLKTKKASLTLNNNRKPVSALAWDPNNSTTLLTGTSDDNTPVVLLWNLR
NSQAPERTLQGHDQGILALSWCQQDAGLLVSCGKDNRALVWNPQTGERYGEFPEATNWIF
SARFDPGHPNLVAVASFDGRISIHTLQNTNPAAVPAAQSALDDDDFFSKAPTQIQGASFS
LPRAPVWLERPVGVSFGYGGKIVLFRKNDAPAGQPRSSRILITGFTVDSDIGSATDRFEE
AFRAGDVASICDERAAEAKTDEDKEDWLVLKTLSESDGRTKILDHLGFSKAAGDGEASHE
DQDAAWPDGDGDDGEDDFLSDLAPAKGAKTDNPFRLLGEGDAAEDGITRAVILGDFAKAV
DVALKQDRVADAFLLANCGGKELVDKVQAAYLAQKKGSPSYLRLVGSILHKNLWDVVYNA
DLDHWKEAMVTLCTFAEPSEFPDLCEALGDRILESGSRQDASFCYLVGSKLDKLVDIWLA
ALAEAEQSGLQEATANDSSFSIHARALQHFIEKVTVFRHVTRFADGEKELREGWKLASLY
DKYVEYAEIVASQGHLAVAQRYLDLLPTHFPAAEVARNRPPAAASSNPYAPAGPSLIQSS
APVSHGAPPTAAPAGYQPPAAVSSNPYAPAGPNLIQPSGPGPAPARRTPYGQPTPPPPRN
AGPPPAATRKDVGNWNDVPMVVKAPVRKSTPSVAPVTAPFPGPAAGLQGRAASQHAVGGP
PPQAGQIPPRPSSVTSNASTNPYVPAAPPPAGLPSPMVPPPAPRTASPYNPPPAGPPPSN
RPYAAPRLRRSSSSSRRPRRRRPRALPSARRPRRALPRRPPARLGPPRRRRGRGLAKTRP
GAGGDPPPAPPPQAERRPPGDRSNIPPNAQRLVEVLSADMQRVAAKAPATFAPQVRDTQK
RLNILFDHLNNHELVKPDTIEQLTLVAEAIAAKNYDEASRIQTEVLKTKTEECGQWMTGL
KRLISMSKATP
NT seq 3456 nt   +upstreamnt  +downstreamnt
atggtccggctgagagagatcccgcggacggcggcctttgcatggtcgccggggcccgtc
cccatcctcgtcaccggcacccggtccggcgccgtcgatgccgacttctcggacgagacc
aagctcgagctgtgggacctccacctcgatgcccaagatcagagcctcgagctgcaaccc
atagccggcatcagcaccgagtcgcgcttctacgacatagcctggggcgccccgagcgac
gaccacccgcggggcgtcatcgccggcgccatggaggacggcgcgctccagctctgggac
gccgccaagcttctcgccggcgaggaggcgctcctgtctcgcgacgtcaagcacacgggc
cccatcaaggccctccagttcaaccccctccggccccaggtgctcgccaccgccggcgcc
aagggcgagctgttcgtctgggacgtcaacgacacgtcgaccgccttccgcctcggcacc
gccgccgcccacgacatcgactgcgtcgcctggaaccgcaaggtgtccaacatcctggcc
accggcagcgccggcggcttcgtcaccgtctgggacctcaagaccaagaaggcgtcgctg
acgctcaacaacaaccgcaagcccgtcagcgccctcgcctgggaccccaacaactcgacc
accctcctcacgggcacctcggacgacaacacccccgtcgtcctgctgtggaacctccgc
aactcgcaggcccccgagcgcaccctgcagggccacgaccagggcatcctcgccctgtcg
tggtgccagcaggacgccggcctgctcgtctcgtgcggcaaggacaaccgcgccctcgtc
tggaacccccagacgggcgagcgctacggcgagttccccgaggccaccaactggatcttc
tcggcccgcttcgacccgggccaccccaacctggtcgccgtcgcctcctttgacggccgc
atctccatccacaccctgcaaaacaccaaccccgccgccgtccccgccgcccagtccgcc
ctcgacgacgacgacttcttctccaaggccccgacccagatccagggcgcctccttctcc
ctgccccgcgcccccgtctggctcgagcggcccgtcggcgtctcgttcggctacggcggc
aagatcgtcctgttccgcaagaacgacgcccccgccggccagccccgctcgtccaggatc
ctcatcacgggcttcaccgtcgactcggacatcggctccgccaccgacaggttcgaggag
gccttccgcgccggcgacgtcgcctccatctgcgacgagcgcgccgccgaggccaagacg
gacgaggacaaggaggactggctcgtcctcaagacgctgagcgagtcggacggccgcaca
aagatcctcgaccacctgggcttctccaaggccgccggcgacggcgaggcttcgcacgag
gaccaagacgccgcgtggcccgacggcgacggcgacgacggcgaggacgacttcttgtcg
gatctcgccccggccaagggcgccaagacggacaacccgttccggctcctcggcgagggc
gatgccgccgaggacggcatcacgcgggccgtcatcctcggcgactttgccaaggccgtc
gacgtcgccctgaagcaggaccgcgtcgccgacgccttcctcctggccaactgcggcggc
aaggagctcgtcgacaaggtgcaggcggcctacctcgcccaaaagaagggctccccgagc
tacctgcgcctcgtcggctccatcctccacaagaacctgtgggacgtggtgtacaacgcc
gacctggaccactggaaggaggccatggtgacgctgtgcacctttgccgagccgtccgag
ttccccgacctctgcgaggcgctcggcgaccgcatcctcgagtcgggctcgcgccaggac
gcgtccttttgctacctggtgggctccaagctcgacaagctggtcgacatctggctggcc
gccctcgccgaggccgagcagagcggcctgcaggaggccaccgccaacgactcgagcttc
tcgatccacgcccgcgccctgcagcacttcatcgagaaggtgaccgtcttccgccacgtc
acccggttcgccgacggcgagaaggagctccgcgagggctggaagctcgcctccctctac
gacaagtacgtcgagtacgccgagatcgtcgcgtcccagggccacctcgccgtcgcccag
cggtatctggacctgctccccacccacttccccgccgccgaggtggccaggaaccgcccg
cccgccgccgcctcgtccaacccgtacgccccggcgggcccgagcctgatccaatcctcg
gcccccgtctcccacggcgccccgcccacggccgcgccggcgggctaccagccgcccgcc
gccgtctcgtccaacccgtacgccccggcgggtccgaacctgatccagccctccggcccc
ggcccggctccggcgcgccgaaccccgtacggccagccgacccctccgcctcctaggaac
gccgggcctcctcccgccgcgaccaggaaggacgtgggcaactggaacgacgtgcccatg
gtggtgaaggcgcccgtgcgcaagagcaccccgagcgtggcgcccgtgacggcccccttc
cccggcccggccgccggcctgcaaggccgggccgcctcgcaacacgccgtcggtggaccg
ccgccccaggcgggccagatcccgccccggccgtcgtccgtcacctccaacgcgtcgacc
aacccctacgttcccgcggcgcctccgccggccggcctgccgtcgcccatggtccctccg
cctgccccgcgcaccgcgtcgccgtacaacccgcctcccgccggcccgccgccgtccaac
cgcccctacgccgcgccccgcctccgccgcagcagcagcagttcgcgacggccccgccgc
cgcaggcctcgcgccctcccctcggcccgccgcccaaggcgggctctcccgcggcggccg
ccggcccgcctagggccgccccgccgccgcaggggccgcggcctcgccaagacccgcccc
ggcgcaggcggcgaccctccccctgctccgccgccgcaggccgagaggcggccgcccggc
gaccggtccaacatcccgccgaacgcgcagcggctggtggaggtgctcagcgccgacatg
cagcgggtggcggccaaggcgccggcgacgttcgcgccgcaggtccgggacacgcagaag
cggctcaacatcttgtttgaccacctcaacaaccacgagctggtcaagccggacacgatc
gagcagctgacgctggtggccgaggccatcgcggccaagaattacgacgaggcgtcgaga
atccagaccgaggtgctcaagaccaagacggaagaatgcgggcagtggatgacggggctc
aagcggctgatcagcatgagcaaggcgacgccttga

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