Remersonia thermophila: 98127925
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Entry
98127925 CDS
T10833
Symbol
VTJ83DRAFT_6557
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
rthe Remersonia thermophila
Pathway
rthe03013
Nucleocytoplasmic transport
rthe03015
mRNA surveillance pathway
rthe03040
Spliceosome
Brite
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
98127925 (VTJ83DRAFT_6557)
TREX complex
98127925 (VTJ83DRAFT_6557)
Spliceosome [BR:
rthe03041
]
Complex C
Other components
EJC/TREX
98127925 (VTJ83DRAFT_6557)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
98127925 (VTJ83DRAFT_6557)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_PARP14_3
RRM_occluded
FoP_duplication
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
98127925
NCBI-ProteinID:
XP_070864184
JGI:
Remth1_6557
LinkDB
All DBs
Position
6:join(1325169..1325396,1325466..1325495,1326421..1326585,1326652..1326993)
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AA seq
254 aa
AA seq
DB search
MSGKLDKSLDEILSSQRKTQGRRRSTRRSSGAARPANTAPAGGIQKSTKPARGATKPSPA
KSAGLTGESKIMVSNLPKDVSEAQIKEYFQQSVGQVKKVEISYGPGGVSRGIAHVTFQHA
DGASKAFQTLNGLLIDNRPVKVEVVIASADLIPQPKPLAQRIVQPKAQPKSAATVKQNGA
TAKAGAAGAAAKGAKKPRRGRSHRPVKKTAEELDSEMADYFDNANAADNNANAAAPAAAA
AAAGGDAPMEEDVL
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaagcttgacaagtctctcgacgagatcctctcgagccagaggaagactcag
ggtcgccgccgttctacccgtcgctcgtccggcgccgctcggcccgccaacacggccccg
gctggtggcatccagaagagcaccaagcccgcccgcggcgcaaccaagccgtcccctgcc
aagagcgctggcctgaccggcgaaagcaagatcatggtcagcaacctgcccaaggatgtg
tccgaggcgcagatcaaggaatacttccagcaatccgttggccaggtcaagaaggttgag
atttcgtacggccccggcggcgtcagccgcggcattgcgcacgtcaccttccaacacgcc
gacggcgccagcaaggccttccagaccctcaacggccttctgatcgacaacaggcccgtc
aaggtcgaggttgttattgcctccgccgatctcattccccagccgaagccgctcgcccag
cgcatcgtccagcccaaggcccagcccaagtcggctgccacggtcaagcagaacggcgcc
acggccaaggccggcgccgccggcgccgccgccaagggcgccaagaagcctcgccgcggc
cgcagccaccgccccgtcaagaagacggccgaggagctggactccgagatggccgactac
ttcgacaacgccaacgcggccgacaacaatgccaacgctgccgctcccgccgccgctgcc
gctgctgcgggcggcgacgcgcccatggaggaggatgttctttga
DBGET
integrated database retrieval system
