Remersonia thermophila: 98128055
Help
Entry
98128055 CDS
T10833
Symbol
VTJ83DRAFT_6674
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
rthe Remersonia thermophila
Pathway
rthe03022
Basal transcription factors
rthe03420
Nucleotide excision repair
Brite
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
98128055 (VTJ83DRAFT_6674)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
98128055 (VTJ83DRAFT_6674)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
98128055
NCBI-ProteinID:
XP_070864301
JGI:
Remth1_6674
LinkDB
All DBs
Position
6:complement(1754588..1756558)
Genome browser
AA seq
656 aa
AA seq
DB search
MALPRGRTLYKKKDGILTLTEDRNALIWTPMPATGPPTVCLALENIMNLQQTPDGSPKVV
LRVIEKPKPAAGEGAAPSQFLFQFTSPTDARAEANAIRDLLSQLLTANRENDPSVPRPVA
GGPADGAGPSAALSFASTANAKAAPPKWFDDALLKADAELQQSLMRKDEALAQTYADALA
LKPPSLSEAAFNAQFWSARLGLLRAHAIELNQKKGAYNVLSTIKPRTEDGQFRLNITSEQ
ISMILQQHPLVRRIYNENVPKLTESDFWSRFFLSKLSKKLRGERITENDNSDVIFDRYLE
ADNSFGYSKITAAQRVPHMIDLEANEENQGGLKTGNRKDVEMRPRGNVPIIKTLNSLSEK
IMANVAPSDLDPSAPASLIDDDRALDALTLRDLRGDKEAARIILNVREQSRFFSSNQDGL
SDETRAYEKQVPSEVLFEVQADLETLEDDGSGGLDLRKSIGVDDEEEDDEDEDENGAGAA
ARPTHVGSRAARKKAQDQILEGMRKKRSELHDVGGGSLADGNPSPMSIPPDIAERCVLTN
ATTTEFLRQFWTAFLSGDAAASAQEELAYYAESLRRSAARIDALAAEAEHARQLLIERRK
KEIKEYYERTRKKLRWQPPKGGKESVMALFEGTVTALNAALEMYAQAKAQGGKGRL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggccctcccccgcggccgcaccctctacaagaaaaaagacggcatcctcaccctcacc
gaggaccgcaatgccttgatctggaccccgatgccggccacgggcccgcccaccgtgtgc
ctggccctcgaaaacatcatgaacctgcagcagacccccgatggctcgcccaaggtcgtc
ctgcgcgtcatcgagaagcccaagcccgccgccggcgagggcgccgccccttcgcagttc
ctcttccagttcacgtcgccgaccgacgcccgagccgaggccaacgccatccgcgacctg
ctctcgcagctgctgacggccaaccgcgagaatgatccctccgtgccccggcccgtcgcc
ggcggacccgctgacggcgccggcccctcggccgccttgtcgttcgcgagcacggccaac
gccaaggccgcgcccccgaagtggttcgacgacgccctgctcaaggccgacgcggagctg
cagcaatcgctcatgcgtaaggacgaagccctggcccagacgtacgccgacgccctcgcc
ctcaagcccccgtcgctctcagaagccgccttcaacgcccagttctggtccgcacgcctc
ggcctgctccgcgcccacgccatcgagctcaaccagaaaaagggcgcctacaacgtgctc
tccaccatcaagccgcgaaccgaggacggccagttccgcctcaacatcacgtcggagcaa
atctccatgatcctgcagcagcaccccctggtgcgccggatatacaacgaaaacgtcccc
aagctcaccgagagcgacttctggtcgcgcttcttcctgagcaagctgtccaagaagctc
cgcggcgagcgcatcaccgaaaacgacaactcggatgtcatctttgaccgctacctcgaa
gccgacaactcgttcggctacagcaagatcacggccgcccagcgcgtgccccacatgatc
gacctcgaggccaacgaggagaaccagggcggcctcaagacgggcaaccgcaaggacgtc
gagatgaggccccgaggcaacgtccccatcatcaagaccctcaacagcctcagcgagaag
atcatggccaacgtcgcgccgtccgacctcgacccctcggccccggcgagcctcatcgac
gacgaccgcgccttggacgccctcaccctgcgcgacctgcgtggcgacaaggaggcggcc
cgcatcatcctcaacgtccgcgagcagagccgcttcttctcgagcaaccaggacggcctg
tcggacgagacccgcgcctacgagaagcaagtcccttccgaggtgctgttcgaggtccag
gccgacctcgagaccctcgaggacgacggctccggcggcctcgacctgcgcaagagcatc
ggggtcgacgacgaggaagaagacgacgaggacgaggacgagaacggagccggcgccgcc
gcccgtcccacccacgttggctcgcgcgccgcccgcaagaaggcccaggaccagatcctc
gagggcatgcgcaagaagcgctccgagctgcacgacgtcggcggcggctccctcgccgac
ggcaacccctcgcccatgagcatccccccggacattgccgagcggtgcgtcctcaccaac
gccaccacgaccgagttcctccgccagttctggaccgccttcctctcgggcgacgccgcc
gcctcggcccaggaggagctcgcctactatgccgagtcgctgcggcgctcggccgcgcgc
atcgacgccctcgccgccgaggctgagcacgcccgccagctgctcatcgagcgccgcaag
aaggagatcaaggagtactacgagcgcacgcgcaagaagctgcgctggcagccgcccaag
ggaggcaaagagtcggtcatggccctgtttgagggtaccgtgacggcgttgaacgcagcc
ttggaaatgtatgcccaggccaaggcccagggggggaagggtaggttgtaa
DBGET
integrated database retrieval system
