Remersonia thermophila: 98128103
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Entry
98128103 CDS
T10833
Symbol
VTJ83DRAFT_6717
Name
(RefSeq) hypothetical protein
KO
K24155
rabconnectin-3a
Organism
rthe Remersonia thermophila
Pathway
rthe04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
98128103 (VTJ83DRAFT_6717)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98128103 (VTJ83DRAFT_6717)
Membrane trafficking [BR:
rthe04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
98128103 (VTJ83DRAFT_6717)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
98128103 (VTJ83DRAFT_6717)
RAVE complex
98128103 (VTJ83DRAFT_6717)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
TPR_GEMI5
Motif
Other DBs
NCBI-GeneID:
98128103
NCBI-ProteinID:
XP_070864344
JGI:
Remth1_6717
LinkDB
All DBs
Position
6:complement(join(1968878..1969701,1969900..1971631,1971679..1973298,1973393..1973473))
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AA seq
1418 aa
AA seq
DB search
MRVVLPGKPESRLQAVATGWWAGNRITAYGTGSALAILGSQHALLQTIYDDSDPDPLHAV
ALDEASGKIAVGTRRAVRIYRPVGAGQDVGDWQWALQATFPVAAGDKEARDRDAEGAAKK
EEDDDDALPAVSLSWGASEELLVAHRSLELYQTAGSAGANPELSWSKRLANPARLAGLSY
DSAYIASAGAYDRLVKVWRRLSYGAGEARFDFVYLRHPRPVTGMRWRRPRHVDQTIENAL
YTFCADKVLRVWAGSDGRAPQPLQLWGSLRLDEAIPAAPSTPPEELRRWAFILQGGDFAA
AAEKAVQEGARTDEEATALDHLVTVANCGPEICVVLDGRGRMSAWAIANVGCKTKRGNIF
NVAYVTSPELDFLRGSGGGSGGGSGGSAPHVEIYGYCQTGDHLHLLLHFFDGRIEVYRTN
VAALFDRNPARPRLTPTAVWTGHSAPIRKIVRNPSGRAIVSRTEHGQGVIWKHQLEASRT
GLSRQAVIPEQGHIHRMCLLRRGRFAVFLRHETVALWDCRQPAPRTLAEIPYDVPGKPLC
LLVLPRINVDDYTTAHLATITSEKQGIQQQQQQQQQRRRRRRRRHPAAPNGAAHDRDHGD
DKDDKDDRRRSQQPPSIRELVRFTLEDAGDLAYVLPVDPAGTTPHVSGFLDVFARDVAIS
YTRSGRVEFWTARVGHGGGDRVEWLSTCAMETAVASPALVSGSTSKKAALVDAGRTGLTI
WDIRGARLEYSQEFDNGHTIRDLDWTSTPDRQSILAVGFPHRVLLLSQMRFDYLNHGPAW
APIREVSIRDFTPHPIGDSVWLGDGHLVIGAGHQLFVLDRQFDAASSLVASLRLPPKRPG
ERHWDLFDVVQRLNGPLPVFHPQFLSQCILAGKTRLVHAILMALHKALRFWAEGDRLDDY
LGLPIEDFYEVDHSAKTSAFKDPGQYLEQRELYDERGEAGAFGEEVAADIAERLTRVDVE
QLSGHEQMQLVDIVECVGLVEKQRRALDENGARFVLFLRQHALRKGRAGGVQLGWREINW
AYHSTSQDVLVDLVTRQCHGRLRWDNARESGVFMWLADGAAVRAQFEAVARNEYARAEQR
NPVDCSLYYLALRKKTVLQGLWRMATWHREQAATQKLLANNFEDPRWRTAALKNAYALMS
KRRFEYAAAFFLLADHLQDAVNVCLNQLQDLQLAIAIARVYEGDNGPVLRRLLEEEVLAI
AAQQGNRWLASWAFWMLRRRDMAVRALIAPVYTLLETPGSPDPRSRLFLTDDPALAVLYC
QLRQKTLQTLRGASRVTPQVEWEFVLHNARLYDRMGCDLLGLDLVRNWEFFRPQASAAVP
GAGLGGEIDPTRLLKRRASLVVADLPVGMGPLEQRQLLLQEGQKLQQQQQQQQETEKQQQ
TVPAGMKSGGLMPKPPATPAPPVFEEPDANSLLDSFGF
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtagtcctgcccggcaagcccgagtcgcgcctccaggccgtggctacgggttgg
tgggcggggaacaggatcactgcctacggaaccggcagtgccctcgccatcctcggcagc
caacacgccctcttgcaaaccatctacgacgacagcgacccggaccccctgcacgccgtt
gccctggacgaagcctcgggcaagatcgccgtaggcacccgccgcgccgtcaggatatac
cgccccgtgggcgcgggacaggacgtcggggattggcagtgggcgctgcaggccaccttc
ccggtcgccgccggggacaaggaggccagggacagggacgccgagggggcggcgaaaaaa
gaagaggatgacgacgacgctctgccggcggtgtcgctctcgtggggcgcctccgaggag
ctgctcgtcgcccaccggagcctcgagctgtaccagacggccgggagcgccggcgccaac
ccggagctctcgtggagcaagcgcctggccaaccccgcgcggctggcgggcctgtcgtac
gactcggcctacatcgcgtcggccggcgcctacgaccgcctcgtcaaggtctggcgccgg
ctgagctacggcgccggcgaggcgcggttcgactttgtctacctccgccacccgcggccc
gtcacgggcatgcgctggcgccggccgcggcacgtcgaccagaccatcgagaacgcgctg
tacacgttctgcgccgacaaggtgctgcgcgtctgggcgggatcggacggccgggcgccg
cagcccctgcagctttggggcagcctgcgcctcgacgaggccatccccgccgcgccgtcg
acgccccccgaggagctccgccgctgggccttcatcctgcagggcggcgacttcgcggcc
gccgccgagaaggcggtccaggaaggcgcccggaccgacgaggaggcgaccgccctggac
cacctcgtcaccgtggccaactgcgggcccgagatctgcgtcgtcctggacggccgcggc
cgcatgtcggcgtgggccatcgccaacgtcgggtgcaagaccaaaaggggcaacatcttc
aacgtggcgtacgtgacgtcgccggagctcgactttctccgagggagcggcggcggcagc
ggcggcggcagcggcggctccgcgccgcacgtcgagatctacggctactgccagaccggc
gaccacctgcacctgctgcttcacttcttcgacggccggatcgaggtgtaccgcaccaac
gtcgccgcgctcttcgaccgcaacccggcccggccgaggctgacgcccacggccgtctgg
acgggccactcggcgcccatccgcaagatcgtccgcaaccccagcgggcgcgccatcgtg
tcgcgcaccgagcacggccagggcgtcatctggaagcaccagctcgaggcgagccggacg
ggcctctcgcgccaggccgtgatcccggagcagggccacatccaccgcatgtgcctcctg
cgccgcggccgcttcgccgtcttcctgcgccacgagacggtcgccctctgggactgccgg
cagcccgcgccgaggaccctcgccgagatcccctacgacgtgcccggaaagccgctctgc
ctgctggtcctgccgcgcatcaacgtcgacgattacacgaccgcccacctcgccaccatc
acgtcggaaaagcagggcatccagcagcagcagcagcagcagcaacagcggcggcggcgg
cggcggcggcggcaccccgcggcccccaacggcgcggcccacgatcgcgatcacggcgac
gacaaggacgacaaggacgaccgccgccgaagccagcagccgccctcgatccgcgagctc
gtgcgcttcacgctcgaggacgcgggcgacctggcctacgtgctccccgtcgacccggcg
ggcacgacgccgcacgtgtcggggttcctggacgtgttcgcgcgcgacgtggccatctcg
tacacgcgctccgggcgggtcgagttctggacggcgcgcgtcgggcacggcggcggggac
cgggtcgagtggctttcgacgtgcgccatggagacggcggtggcgagcccggcgctggtc
agcggcagcacgagcaagaaggcggcgctggtggacgcggggcgcacgggcctgaccatc
tgggacatacgcggggcgcggctcgagtactcgcaggagtttgacaacgggcacacgatc
cgggacctggactggacgagcacgccggaccggcagagcatcctggccgtggggttcccg
caccgcgtgctgctgctgagccagatgcgcttcgactacctcaaccacggccccgcgtgg
gcgccgatccgcgaggtgtcgatccgcgacttcacgccgcaccccatcggcgactcggtc
tggctcggcgacggccacctggtgatcggggcgggccaccagctcttcgtcctggaccgc
cagttcgacgcggccagctcgctcgtggcgagcctgcggctgccgcccaagcggcccggc
gagcggcactgggacctgttcgacgtggtgcagcgcctcaacggcccgctgcccgtgttc
cacccgcagttcctgagccagtgcatcctggccggcaagacgcgcctcgtgcacgccatc
ctcatggcgctgcacaaggcgctgcggttctgggccgagggcgaccgcctcgacgactac
ctgggcctgccgatcgaggacttttacgaggtggaccactcggccaagacgagcgccttc
aaggacccgggccagtacctcgagcagcgcgagctgtacgacgagcggggggaggcgggc
gcgttcggggaggaggtggcggccgacatcgcggagcggctcacgcgcgtcgacgtcgag
cagctgtccgggcacgagcagatgcagctcgtcgacattgtcgagtgcgtcgggctcgtc
gagaagcagcggcgggcgctcgacgagaacggcgcgcggttcgtgctcttcctccggcag
cacgcgctgcgcaagggccgcgccggcggcgtccagctcggctggcgcgagatcaactgg
gcgtaccactcgacgagccaggacgtgctcgtggacctggtgacgcgccagtgccacggc
cgcctgcgctgggacaacgcccgcgagagcggcgtctttatgtggctggccgacggcgcc
gccgtgcgggcccagttcgaggccgtcgcgcgcaacgagtacgccagggcggagcagagg
aaccccgtcgactgcagcctgtactacctggcgctccggaagaagacggtcctgcagggc
ctgtggcgcatggcgacgtggcaccgcgagcaggcggcgacccagaagctgttggccaac
aactttgaggatccgcggtggaggacggcggcgttgaagaatgcgtacgcgttgatgagc
aagcggcggttcgaatacgccgccgccttcttcctcctggccgaccacctccaagacgcc
gtcaacgtctgcctcaaccagctccaggacctgcagctcgccatcgccatcgcgcgcgtc
tacgagggcgacaacggccccgtcctgcgccgcttgctcgaggaggaggtgctggccatc
gcggctcagcaaggcaaccgctggctggcgtcgtgggcgttttggatgctgcgccggcgg
gacatggcggtgcgggcgctcatcgcgcccgtctacacgctcctcgagacgcccgggtcg
ccggacccccggtcgcggctgttcctgacggacgacccggcgctggcggtgctgtactgc
cagctccggcaaaagacgctgcagacgctgcgcggcgccagccgcgtcacgccccaggtc
gagtgggagtttgtgctgcacaacgcgcgcctctacgaccgcatgggctgcgacctgctg
gggctcgacctcgtccggaactgggagttcttccggccccaggcctcggcggccgtcccc
ggcgcgggcctgggcggcgagatcgacccgacgaggctgctcaagaggcgggcgtcgctc
gtggtggcggacctgcccgtcggcatggggccgctcgagcagaggcagctgctgctgcag
gaagggcagaagctgcagcagcagcagcaacaacaacaggagacagaaaagcagcagcag
acggtgccggcagggatgaaatcgggagggctgatgccgaagccgccggccacgcccgcg
ccgcccgtgtttgaggagccggatgcgaactcgctgctggatagctttgggttttga
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