KEGG   Remersonia thermophila: 98128141
Entry
98128141          CDS       T10833                                 
Symbol
VTJ83DRAFT_6751
Name
(RefSeq) hypothetical protein
  KO
K14309  nuclear pore complex protein Nup93
Organism
rthe  Remersonia thermophila
Pathway
rthe03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    98128141 (VTJ83DRAFT_6751)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rthe03019]
    98128141 (VTJ83DRAFT_6751)
Messenger RNA biogenesis [BR:rthe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     98128141 (VTJ83DRAFT_6751)
SSDB
Motif
Pfam: Nic96 Nucleoporin_FG
Other DBs
NCBI-GeneID: 98128141
NCBI-ProteinID: XP_070864378
JGI: Remth1_6751
LinkDB
Position
6:complement(join(2092274..2092597,2092661..2095912))
AA seq 1191 aa
MSLFMGRGTPATAQSTGSLGGGSTTPAASGAGNSIFGQTTTGSSLFGNKPAATTTPAQSQ
PSATFGTSLFGTSTTSSTTPKTSLFGGTPAATTAQPGASLFGTSTATTTQPASGTSLFGA
STATTQPAAGASLFGASTATAKPAGTSLFGNTTTTQPPAGTSLFGTSTAATTQPPAGASL
FGSTLGGGLSLNPTNQQQQQQQQQGQQNPPSALPRGALFDSLLAKNKKQAEGETALGELP
SLQLGLGDLRQRLKKLGPSQDKPVQHGKAHYFLAASGVDPGAAVRDLGAFGLQARERAAP
AAQGPGFGAGLGEVDVETYLSNLQNKTTLSMIADGLERSVRDFDAFLEENVTMEWEAQRR
RIYQHFGIKPREETASAQAAARVATPSKDGQGTFGRSRRKASQPPPGERPSQRQSVLGRS
TMQRSVIGTPSRIGSHAPGFSDVEPRKDGAGTLGVGGVGGGTTSADERFLREKQSKLADK
MRDFNDARQRGDPIYLCRDLAELESKSGDRHGPHIVDAYRAMMEIVGEFPESGQTPGPRR
FARQYLDPNPQSASAINLRKQILSGATAFLEKQFWDEANALIAKHPQEANLGGLPDAVSK
IKAYIRLRIARKTLVPDGVELQQANGEYIWAIVFYLLRAGFVEEAATYVNRNQNHFRSID
RTFSGYINSYASSEERRLKRQMQDRCASEYNQRIRNAPEGSIDPFRMACYKIIGRCDLAN
RSLDGLQTDVKDWIWLQFNLARETDRSLELAGESYGLAELQASIREIGLKHFPKTPADDT
NGSFGMFFYLQVLSGMFEQAIAYLYPFSYVDAVHFAIALTYYGLLRPTDALASANELLSH
NTRSQPQINFARMLGYYTRDFRAANPAAAVDYLALICLNADDAGGPQQQQQQAALCHEAL
RELVLESREYSRLIGDIRPDGTRIRGVIEERGPLIALGHEDDFMRAITLQAAGFAEDNGR
TTDAVLLYHLAEDYDAVVSIVSRALSEAVSLEIGEDPMRLVPVKPRVDAAKEQAAADAQS
GSSLSLAAIDDPVELARTMMAMYDRDRMFWQKIREPNRQACAVLLQMSEIKSLVEQGKWP
ECLDRIRALDILPLGANGDPALIRHYAARFPSLAQPVAINVPNLLLWTVACCARQRERLA
TSGMYTGNQATARQMADELKQISLDLTAYTSQLRYRLPPHLHEALARASAD
NT seq 3576 nt   +upstreamnt  +downstreamnt
atgtcgctgtttatgggccggggaacgcccgcgacggcgcagtcgacgggctccttgggc
ggcggcagcaccactccagctgcctcgggtgctggcaacagcatttttggccagaccacc
acggggtcttcgctctttggtaacaagcccgccgccaccacgacgccggcccagtcccag
ccgtccgcaaccttcggcacctccctctttggcacctcgaccacctcgtcgaccacccca
aagacctccctcttcggtggcaccccggccgccaccaccgcccagcccggcgcgagtctc
tttggcacctcgaccgccacgacgacccaaccagcctctggcacgagcctctttggtgcc
tcgacagctaccacccagccggccgccggtgccagcctctttggcgcctcgaccgccacg
gccaagcccgctggcacaagcctctttggcaacaccacgacaacccagccgcccgcggga
acaagcctgtttggcacctcgaccgccgcaacaacccaaccgcccgctggtgcgagcttg
ttcgggtctaccctcggcggcggcctgagcctgaacccaacgaaccagcagcagcagcaa
caacaacaacaaggccagcagaacccgccatcggccctcccgaggggtgccttgttcgat
agcctgctggccaagaacaagaagcaggccgagggcgagacggccctgggggagctgcca
tcgctccagctcggcctcggagacctccgccaacgccttaagaagcttggcccctcccag
gacaagcctgtccagcatggaaaggcccactactttctcgccgcctcgggcgtcgatccc
ggtgccgccgtgcgcgacctgggcgcgttcgggctccaggcccgagagcgtgccgccccc
gccgcccaaggccccggctttggcgccggccttggtgaggtcgacgtcgagacgtacctg
tccaacctgcaaaacaagacaactctcagcatgatcgccgacggtctcgagcgctccgtg
cgcgacttcgacgccttcctcgaggaaaacgtgaccatggagtgggaggcgcagcgccgc
cgcatctaccagcacttcggcatcaagccccgggaggagaccgcctccgcccaggctgca
gcccgtgtcgcgaccccctccaaggacggccagggcaccttcggccggtctcgccgcaag
gcgagccagccgccccccggcgagcggcccagccaacgccagagcgtcctgggccgttcc
accatgcagcgctccgtcatcggcacgccgagccgcattggctcgcacgcccctggcttt
tccgacgtcgagccgcgcaaggacggcgccggcaccctgggcgtcggcggcgtcggcggc
ggcacgacctcggccgacgaacggttcctgcgcgagaagcagagcaagctggccgacaag
atgcgcgacttcaacgacgcccgccagcgcggcgaccccatctatctgtgccgcgaccta
gccgagctcgagtccaagtcgggcgaccgccacgggcctcacatcgtcgacgcctaccgc
gccatgatggagatcgttggcgagttccccgagtcgggtcagacccccggcccgcgccgc
ttcgctcggcagtacctcgaccccaacccgcagtcggccagcgccatcaacctgcgcaag
cagatcctcagcggcgccaccgccttccttgagaagcagttttgggacgaggccaacgcg
ctcattgccaagcacccgcaggaggccaacctgggcggcctgcccgacgccgtcagcaag
atcaaggcgtacatccggctgcgcatcgcccgcaagacgctggtgcccgacggcgtcgag
ctgcagcaggccaacggcgagtacatctgggccatcgtcttctacctgctgcgcgccggc
ttcgtcgaggaggcggccacctacgtcaaccgcaaccagaaccacttccgcagcatcgac
cgcaccttttcgggctacatcaacagctacgcctcgagcgaggagcgccgcctcaagcgc
cagatgcaggaccgctgcgccagcgagtacaaccagcgcatccgcaacgcccccgagggc
tccatcgaccccttccgcatggcctgctacaagatcatcggtcgctgcgacctggccaac
cgcagccttgacggcctgcagaccgacgtcaaggactggatctggctgcagttcaacctg
gcccgcgagacggaccgctcgctcgagctggccggcgagtcgtacggcctcgccgagctg
caggccagcatccgcgagatcggcctcaagcacttccccaagacgcccgccgacgacacc
aacggcagcttcggcatgttcttttacctgcaggtgctgtcgggcatgttcgagcaggcc
atcgcgtacctgtacccgttctcgtacgtcgacgccgtgcacttcgccatcgccctgacc
tactacggcctgctgcgcccaaccgacgccctcgccagcgccaacgagctgctctcgcac
aacacgcgcagccagccccagatcaactttgcccgcatgctcggctactacacgcgcgac
ttccgcgccgccaacccggccgccgccgtcgactacctggcgctcatctgcctcaacgcc
gacgacgccggcgggccccagcagcagcagcaacaggccgccctgtgccacgaggcgctc
cgcgagctggtgctcgagtcgcgcgagtacagccgcctcattggcgacatccgcccggat
ggcacgcgcatccgcggcgtcatcgaggagcgcggcccgctgatcgccctgggccacgag
gacgacttcatgcgtgccatcaccctgcaggccgccggcttcgctgaggacaacggtcgc
accaccgacgccgtgctgctgtaccacctggcggaggattacgatgcggtcgtgtctatc
gtcagccgcgccctgagcgaggccgtgtcgctcgagatcggcgaggatccgatgcgcctg
gtgcccgtgaagcccagggtggatgcggccaaggaacaggccgccgccgacgcccagtcg
ggcagcagcctgagcttggcggccatcgacgatcccgtcgagcttgctcgcaccatgatg
gccatgtacgaccgcgatcgcatgttctggcagaagatccgcgagccgaaccgccaggct
tgcgccgtcctgctccagatgagcgagatcaagagcctggtcgagcagggcaagtggccc
gagtgtcttgaccgcatccgcgccctggacatcctccccctcggcgccaacggcgacccg
gccctcatccggcactacgccgcccgcttcccgtcgcttgcgcagcccgtcgccatcaac
gtgccgaacctgctgctgtggacggtggcgtgctgcgcgcgccagcgcgagcggctggcg
acgagcggcatgtacacgggcaaccaggccacggccaggcagatggcggacgagctgaag
cagatcagcctggatctgacggcgtacacgagccagctgcggtatcggttgccgccgcac
ttgcatgaggcgttggcgagggcttcggcggattag

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