KEGG   Remersonia thermophila: 98128147
Entry
98128147          CDS       T10833                                 
Symbol
VTJ83DRAFT_6757
Name
(RefSeq) hypothetical protein
  KO
K14400  pre-mRNA cleavage complex 2 protein Pcf11
Organism
rthe  Remersonia thermophila
Pathway
rthe03015  mRNA surveillance pathway
Brite
Transcription machinery [BR:rthe03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     98128147 (VTJ83DRAFT_6757)
Messenger RNA biogenesis [BR:rthe03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     98128147 (VTJ83DRAFT_6757)
SSDB
Other DBs
NCBI-GeneID: 98128147
NCBI-ProteinID: XP_070864384
JGI: Remth1_6757
LinkDB
Position
6:join(2110829..2110990,2111110..2111574,2111650..2112728,2112818..2113013,2113101..2113523,2113590..2113643)
AA seq 792 aa
MADNAADVAEDYRQALEDLQGNSRIEIATLTNIARENANHGFAIAEALANHIKKVPPTRT
LPALYVLDSIVKNVPTPYALYFGPKLYSIFMGAYTKVDNATRRKMDEMLKTWKEPVPGSI
STKPVFPPELVRPIEHALMAARNAAMAATQNSYQGQQQLMRGRQPAPNRDTPTPPGGRPY
PPPQQQQQQPPYAGRPDAGPQPYPAPHSNGPNALPHRATPQPAPPAGYPPYQQPAGPAYG
APQPAISVEQLKDDIQQLIIAEKAEFAQNPHDTSKQTKLKALLDLQTVIQSQTMPQDQLK
IIKDRLAELAVKLRPPPPQQPQPAASARAPVPVTGPPAPAYPVGVPPYTAGTPTPPIVAS
QPPNAVPPASTAAAVVAAALGRPPSAVAAAATTPATHTPPPSSLPHHPPPPAAAAPPPGG
GGVTLDSLFGQGAFATLLSAARKSATPPVIPPPPQQQQPPPQQQPPLPSTTPPVLGPAAA
AAIAAALRSSQPQQQPLPMPQPSHQQQQQPLSAAVPPSSDPSSLLAILRQSGLLKPAGSS
STTATPPLAIPTMPGDAGVPNLDPASLKIFRPHLIPQLYEELGPPCTQCGRRFKTDEDGR
RRKTAHMDWHFRVHQRMAEAERRGQHRSWYVDETDWIRSREAIDTDYTAPEPSAYADPLS
QPLPGDLSSKLGIALPSAGASAAATPSAAGGAPNASSRTTTPYIPVPEDSSRVNSSCPIC
LERFEMKWLDDAQEWVWMDAVRVEGRVFHASCHREAYGGSTESRPGSVLGKRKAEGQDEA
GGLKGRIKTEGY
NT seq 2379 nt   +upstreamnt  +downstreamnt
atggcagacaacgcggccgacgtggccgaggactaccggcaggccttggaagacctccag
ggcaattcgcgcattgagatcgcgacgcttaccaacatcgcccgagagaacgccaaccat
ggatttgcgatcgccgaggcgttggcgaaccacatcaagaaggtacctccaacgcggacg
ctcccagcgttgtacgttctcgattccatcgtcaagaacgtgccgacgccgtatgccctc
tactttggccctaagctctactccatcttcatgggcgcctataccaaggtcgacaatgcc
acccggcggaagatggacgagatgctcaagacgtggaaagagcccgtcccgggctccatt
tcaacaaaacccgtcttccctcccgagctcgtgcggcccatcgaacacgccctgatggcc
gcccgcaacgctgccatggccgccacccaaaatagctaccagggccagcagcagcttatg
cgcggccggcagcctgccccgaaccgagatacccccacgcccccggggggaaggccgtac
ccccctccgcagcaacaacaacaacagccgccttacgctggacggccggatgccgggcct
cagccatatccggctcctcacagcaacggcccgaacgcgctcccgcaccgtgctacgccc
caacctgctccgccggcaggatatcctccctatcaacagccggcggggccggcctacggc
gctccgcagccggcaatcagcgtagaacagttgaaagatgatatccagcaactgatcatt
gcggagaaggcggagtttgcccagaatccacatgatactagtaaacaaaccaagctgaag
gcattgctggacttgcaaaccgtaatccagagccaaaccatgcctcaggatcagttgaag
atcataaaagatcgacttgctgaacttgctgtaaaactccggccgccgccaccgcagcag
ccgcagccggcagcttcggcgcgggctcctgttcccgtcaccgggccgcccgcgcccgcc
tatcctgtcggcgtgcccccctacaccgccggcactccgacgcctccgatcgtggcgtct
cagccgccgaatgctgtcccgccggcgtcgacagcagccgctgtggtggccgctgccctg
gggcgtccgccgtccgccgttgctgctgctgccactacccctgctacacacacaccaccg
ccatcatcactacctcatcatcctccccctccagcggcggcggcgccgccgcctggcgga
ggcggcgtcacgcttgactcgctttttggacaaggcgcgttcgcgaccctcctgtcggcc
gcgcggaagtcagccacaccccctgttatcccgccgccgccgcagcagcaacaaccacca
ccacaacaacagcctccgcttccgtctaccactcctccagtcctcggcccggcggccgct
gccgccattgctgccgccctgaggtcttctcagccgcagcagcagcctctgccgatgccg
caaccatcacaccaacaacaacaacagcccctttccgcggccgtgccgccttcgtcggac
ccgtcctccttgctagccattctgagacagtcaggcctgctcaagcccgctgggagctcc
tcgacaacagccacccccccgcttgctatccctaccatgccgggtgatgcaggcgttccg
aaccttgatccggcgtcgttgaagatcttccgtcctcacctcatcccgcagctctacgag
gaactcggcccgccgtgcacgcagtgtggacggcggttcaagacggacgaagacggccgc
cgccgcaagacggcgcacatggactggcattttagggtgcaccagcgcatggcagaggcg
gagaggcgagggcagcacaggagttggtatgtcgacgagacggactggatccgctcccgc
gaagccatcgacacggactacacagcccccgaaccctctgcctacgccgacccgctcagc
cagccactccctggcgacctgagcagcaagctcggcatcgccctcccctcggccggcgca
tccgcggccgccacgccatccgcggccggcggcgcacccaacgcgtcctcacgaaccacg
accccctacatccccgtccccgaggactcctcccgcgtcaactccagctgtcccatctgc
ctcgagaggttcgaaatgaagtggctcgacgacgcccaagagtgggtgtggatggacgcg
gtgcgcgtggaggggcgcgttttccacgcgagctgccaccgcgaggcgtatggcggcagc
accgaaagccgaccagggtcggtgttggggaagaggaaggccgagggacaggacgaagcc
ggagggttgaaagggaggatcaaaaccgaagggtactga

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