KEGG   Remersonia thermophila: 98128215
Entry
98128215          CDS       T10833                                 
Symbol
VTJ83DRAFT_6818
Name
(RefSeq) hypothetical protein
  KO
K10756  replication factor C subunit 3/5
Organism
rthe  Remersonia thermophila
Pathway
rthe03030  DNA replication
rthe03410  Base excision repair
rthe03420  Nucleotide excision repair
rthe03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rthe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    98128215 (VTJ83DRAFT_6818)
   03410 Base excision repair
    98128215 (VTJ83DRAFT_6818)
   03420 Nucleotide excision repair
    98128215 (VTJ83DRAFT_6818)
   03430 Mismatch repair
    98128215 (VTJ83DRAFT_6818)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rthe03032]
    98128215 (VTJ83DRAFT_6818)
   03036 Chromosome and associated proteins [BR:rthe03036]
    98128215 (VTJ83DRAFT_6818)
   03400 DNA repair and recombination proteins [BR:rthe03400]
    98128215 (VTJ83DRAFT_6818)
DNA replication proteins [BR:rthe03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    98128215 (VTJ83DRAFT_6818)
  DNA Replication Termination Factors
   ELG1-RFC complex
    98128215 (VTJ83DRAFT_6818)
Chromosome and associated proteins [BR:rthe03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    98128215 (VTJ83DRAFT_6818)
DNA repair and recombination proteins [BR:rthe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     98128215 (VTJ83DRAFT_6818)
  Check point factors
   HRAD17(Rad24)-RFC complex
    98128215 (VTJ83DRAFT_6818)
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA_22 AAA AAA_16 Rep_fac_C AAA_24 ATPase_2 T4SS-DNA_transf Rad17 DUF7804
Other DBs
NCBI-GeneID: 98128215
NCBI-ProteinID: XP_070864445
JGI: Remth1_6818
LinkDB
Position
6:complement(join(2337954..2338302,2338358..2338980,2339043..2339129))
AA seq 352 aa
MALIVDKHRPRSLDALTYHGELSERLRSLAQSGDFPHLLVYGPSGAGKKTRIVATLKELF
GPGVEKIKIDARVFQTSSNRKLEFNIVASIYHLEITPSDVGNYDRVVVQDLLKEVAQTQQ
VDQSARQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTL
LVRVAAPTHQEICDVLATSAKKEGWPVVAGLHQRIAEESGRNLRKALLMLEAVHAQNEKV
TDATPIPPPDWEALIGQIAKEIMEEHTPARILQVRSKLYDLLTHCIPATTILRTLAFKLI
PMIDDALKADVIRWAAFYEHRIRTGTKVIFHLEAFVAKFMRIYEMYLMSIDI
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcgctcatcgtcgacaaacaccggcctaggtctctggatgctctcacataccatggg
gagctttcggagcgtctccggtccttggcgcagagcggggattttccccatctcctcgtg
tacggaccgtcgggcgcagggaaaaagacacgaattgtagccacgctcaaggagcttttt
ggccccggcgtcgagaagatcaagatcgatgcacgagtcttccagaccagcagcaaccgc
aagctcgagtttaacattgtggcgtccatctaccacctcgagatcacgccgtccgatgtc
ggcaactacgacagggtagtggtgcaggacctgctcaaggaggtggcgcaaacgcagcag
gtggaccagtcggcgcggcagcggttcaaggtggtggtgatcaacgaggccgaccacctc
acgcgcgacgcccaggccgctctgcgccgcaccatggagaagtactcgcccaatctgcga
ttgatcctgctggccaactcgaccgcaaacatcatcgcccccatccgctcccgcacgttg
ctcgtgcgcgttgccgcccctacccaccaggagatctgcgacgtcctggccacgtcggcg
aagaaggaggggtggcccgttgtggcgggcctgcaccagcgcattgccgaggagagcgga
cgcaaccttcgcaaggccttgttgatgctggaagcggtgcacgctcagaacgagaaagtc
accgacgcaacgccaataccgccccccgactgggaagccctcattgggcagatcgccaag
gagatcatggaggagcacacgccggcacgcatcctccaggtgcggtccaagctctacgac
ttgctgacgcactgcatcccggccaccaccatcctgcgcacgctcgccttcaagctgatc
cccatgatcgacgacgcgctcaaggccgacgtcatccggtgggcggccttttacgagcac
cgcatccggacgggaaccaaggtcatcttccacctggaggcgtttgtggccaagttcatg
cgcatctatgagatgtatctcatgagcatcgacatatga

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