Remersonia thermophila: 98128243
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Entry
98128243 CDS
T10833
Symbol
VTJ83DRAFT_6843
Name
(RefSeq) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
rthe Remersonia thermophila
Pathway
rthe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
98128243 (VTJ83DRAFT_6843)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98128243 (VTJ83DRAFT_6843)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
98128243 (VTJ83DRAFT_6843)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
98128243
NCBI-ProteinID:
XP_070864470
JGI:
Remth1_6843
LinkDB
All DBs
Position
6:join(2400215..2400353,2400474..2401309,2401376..2402302)
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AA seq
633 aa
AA seq
DB search
MAAATVRRSPYKDFLQPALQRRFATASLVVLAIAYVQALFFASWHSYFWSWFPIGPTGFR
TFILFFGGILIVILRISQYHPGLRTSNSGFQTFVTFALKWNTLETLFAYTASATLFGFVY
LWSLDEDAGFELVTYYAGDRARLNERPLYLLSHLALLGVYEAISHLVQDTDRLRLGIARP
QNGGPPGKDDGDPSVQLRRFRERLPKVLVYSIHHSILGILFNTFVYPIFVRRCVWRTTLA
FLRPVYNLPRSSNLPSSMPFVSASTVFRAFVSGFLITFAWAAANAAFSLFLAKQPIKNGK
PLTSDSKDPNGSLLNGLKNKKPPIKCFAVWELALIARDFPDRRRAIYEDIDRKDGPMWSQ
VYKICTDILQTLEANVDAYTAPPPQPEPAPAADPAAEEKHRTLHPPRDDDIFQPVPQSKG
LRGQAEKAATQTVLAPGQGSPLRPAAQRAVETARQRLVDFQREATGTGDQPGLLRDKALG
LLQSPLGWPFRQHYRRRVARAVLGAPYGEPNLYANAAYALGGLAAHSLHEDKYGHVQRDV
AALVRTLTALARRLDAFRAELPAHWTDVDAVRECPEADQVRVALRDALRTLVEAFGPYAR
DLRLTLADMRLAREAAGLVETEKETVEVKGRGR
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagctacagtgaggagatcgccgtacaaggactttctgcagcccgccctgcag
cggcgcttcgccacggcgagtctggtggtgctcgccatcgcctacgtccaggccctgttc
tttgcgagctggcattcttacttctggtcctggttccccatcggcccgaccggcttccgc
accttcatcctcttctttggcggcatcctcatcgtcatcctgcgcatctcgcagtaccat
cccggactgcgcacctccaactcgggcttccagacctttgtgaccttcgcgctcaagtgg
aacacgctcgagaccctcttcgcctacaccgcgtcggccaccctcttcggcttcgtctac
ctctggtcgctggacgaggatgccggctttgagctcgtcacctactacgcgggggatcgc
gcccgcctgaacgagaggccactctatctgctcagccacctggccctcctcggcgtttac
gaggccatctcccacctggtccaggataccgaccgactgcggttgggcatcgcccggccg
cagaacggcggcccccccggcaaggacgacggcgacccgtcggttcagctgcgccggttc
cgcgagcgcctgcccaaggttctggtctactccatccatcactccatcctcggcatcctg
ttcaacacgttcgtctaccccatcttcgttcgtcgctgcgtctggagaacgaccctggcc
ttcctgcggcccgtctacaaccttccccgcagcagcaaccttccgtccagcatgcccttc
gtgtccgcctcgaccgtgttccgcgccttcgtctcgggcttcctcatcacgttcgcctgg
gccgcggccaacgcggccttctcgctgttcctggccaagcagcccatcaagaacgggaag
ccgctgacgtcggattccaaggatcccaacgggagcctcctgaacgggctgaagaataag
aagccgcccatcaagtgcttcgccgtgtgggagctcgccttgatcgcccgcgacttcccc
gaccgacgcagggccatctacgaagacatcgaccgcaaggacgggcccatgtggtcccag
gtctacaagatctgcaccgacatcctccagacgctcgaggccaacgtggacgcgtacacg
gcgccgcctccccagcccgagcccgccccggcggcggacccggcggccgaagagaagcac
cggaccctccaccccccgcgcgacgacgacatcttccagcccgtgccgcagagcaagggg
ctccgcggacaggccgagaaggccgccacccaaacggtcctggcccccggccagggctcg
cccctccgccccgccgcgcagcgcgccgtcgagacggctcggcagcgcctcgtcgacttc
cagcgggaagccaccggcaccggcgaccagcccggcctcctccgcgacaaggcgctcggc
ctgctgcagtcgcccctcggctggcccttccggcagcactaccggcgccgcgtcgcccgc
gccgtgctgggcgcgccctacggcgagccgaacctgtacgccaacgcggcgtacgcgctg
ggcgggctggccgcgcactcgctccacgaggacaagtacgggcacgtgcagcgcgacgtg
gcggcgctcgtgcgcaccctgacggcgctggcgaggcggctggacgcgttccgcgccgag
ctgccggcgcactggacggacgtggacgcggtcagggagtgccccgaggcggaccaggtg
cgggtggcgctaagggacgcgctcaggacgctggtggaggcgtttgggccgtacgccagg
gatctgcggctgaccctggcggacatgaggctggccagggaggcggccgggctggtggag
acggagaaggagacggtggaggtcaaggggagggggaggtaa
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