Remersonia thermophila: 98128373
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Entry
98128373 CDS
T10833
Symbol
VTJ83DRAFT_6960
Name
(RefSeq) hypothetical protein
KO
K13210
far upstream element-binding protein
Organism
rthe Remersonia thermophila
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98128373 (VTJ83DRAFT_6960)
03041 Spliceosome [BR:
rthe03041
]
98128373 (VTJ83DRAFT_6960)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
98128373 (VTJ83DRAFT_6960)
Spliceosome [BR:
rthe03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
98128373 (VTJ83DRAFT_6960)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_NusA_2nd
KH_KhpA-B
KH_PNO1_2nd
MOEP19
Motif
Other DBs
NCBI-GeneID:
98128373
NCBI-ProteinID:
XP_070864587
JGI:
Remth1_6960
UniProt:
A0ABR4D700
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All DBs
Position
6:complement(join(2881108..2881217,2881288..2881453,2881508..2882868,2882945..2882993))
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AA seq
561 aa
AA seq
DB search
MANSTPDINSILKMLGDVSQRPPSTSTPAQGVPSVPAPAAAPHMPPAYPPAAPGAYPPQP
PAYQPPPSYPYPQPAASGSIDLNAIRPVNSGTVQLADAIAKAKAYAAEKGVTPYERQGPG
YGDSRQPDSRHYQRSRSKSPRGREAFRDNFNPYRDERRAEHSGQDRGYGRDRSYSPGRGR
QPFSPRGAHGGRDRSPIRGKDDNSETIEVEASLVGLIIGRQGENLRRVEGESRCRVQFIP
PTGQNDKYRQCRITGPRAQREIAKDMIYRIMHDSGVRGGGPQGDRGGRDRGPVGPPAPKE
GEDSLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVSENKSVNGLRPVNLIGTPAAA
RHAKELILEIVDSDSRNGHNPGARPGRPENFGGGGNEKVNDSIFVPSDAVGMIIGKRGET
IREMQDMTGCKINVSQSSGPGEVEREIGLVGTREAIAQAKRAIEDKVDAARQKSAGGGRG
RGPPRDYDNPNYGQVSNQSSAPNVPASGAAPPAAGAAGQADPYAIYGGYENYIALWWQSQ
LAAQGQAQGQGGAAAPAPGTS
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgactcctgatatcaattccatccttaagatgcttggagatgtatctcag
cgacctccatcgacttcaacaccggcgcaaggcgtgccctcggttcctgcgccagctgct
gcaccgcatatgcctccggcctaccctcctgctgctccaggcgcttatcctccccagccg
cccgcctatcagccgcctccctcgtacccgtaccctcaaccggccgctagcggcagcatc
gatctgaatgcgatccggcccgtcaactcgggcaccgttcagctcgccgatgcgattgcc
aaggcaaaggcatacgctgccgagaagggcgtcaccccttacgagagacaaggccccggc
tatggcgactcgcgtcagcctgattctcgccattatcaacgctcgcgatccaagagcccg
cgtgggcgcgaagccttccgcgacaacttcaacccgtaccgcgacgagaggcgcgccgag
cacagcgggcaagatcgcggctacggccgcgaccgctcgtactcaccaggccgtggtcgc
caacccttctcgcctcgtggtgcccacggcgggcgggatcggtcgccgatccgcggcaag
gacgacaactccgagaccatcgaagtcgaggcaagcctggtcggtttgatcattggccgc
cagggagagaatttgcgccgcgtggagggtgagagccgttgcagggtgcagtttatcccg
ccgaccggccagaacgacaagtaccgtcagtgcagaatcacaggccctcgcgcccagcgc
gagatagccaaggatatgatctaccgcatcatgcatgacagcggcgttcgaggcggtggt
cctcaaggtgaccgtggcgggcgcgaccgtggcccggttggccctccggcgcccaaggag
ggagaggacagccttcagatcatggtccccgatagaaccgtgggcctcatcatcggccgt
ggtggagagaccattcgcgaccttcaggagcggagcggatgccacatcaacatcgtcagc
gaaaacaagagcgtgaacgggttgcgcccggtcaaccttatcggcactcccgccgctgca
cggcatgccaaggaactgattctcgagattgtggatagcgacagcaggaacgggcacaac
ccgggagcccgacccggccgccccgagaactttggcggtggtggaaacgaaaaggtcaac
gactcgatctttgtgccctcggacgcggtcggcatgatcatcggcaagcgtggcgaaacc
atccgcgagatgcaggacatgactggatgcaagatcaacgtctcgcaatcgtcgggtccg
ggcgaggtggagcgcgagatcggccttgtcggcacccgcgaggccattgcccaggcgaag
cgagctatcgaggacaaggttgatgcagcgaggcagaagtctgccggtggcggtcgcggt
cgcggcccgccccgtgattatgacaatcccaactatggccaggtttctaaccaaagcagc
gccccgaacgtgcccgccagcggcgcggcccccccggcggccggcgccgctgggcaggct
gacccgtatgccatttatggtggttacgaaaactacattgcgctttggtggcaatcccag
cttgccgcgcagggccaggcccagggccagggaggcgctgctgccccagctcctggaacc
tcttag
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integrated database retrieval system
