Remersonia thermophila: 98128608
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Entry
98128608 CDS
T10833
Symbol
VTJ83DRAFT_7171
Name
(RefSeq) hypothetical protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
rthe Remersonia thermophila
Pathway
rthe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
98128608 (VTJ83DRAFT_7171)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98128608 (VTJ83DRAFT_7171)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
98128608 (VTJ83DRAFT_7171)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
HBS1_N
GTP_EFTU_D3
GTP-eEF1A_C
GTP_EFTU_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
98128608
NCBI-ProteinID:
XP_070863388
JGI:
Remth1_7171
LinkDB
All DBs
Position
7:join(727164..728472,728529..729916)
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AA seq
898 aa
AA seq
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MSRHQYIRNLDYQDVLDEYEGYSDEEDDELSPEDRELMTQGTAAVQAALGVEASKVTVAQ
IEEALWHYYYDVDKSVAYLISKFVNPAPKPAKTQPHQRTGKLATRAFSTVDHALLLDHDL
PTDWATKTSNLTDAAPPATLGFSSSVGSRCQASSRTGPSLAHLFHDMPWGNVPAHRSTTF
VPPLTPRGGLLGGSGTAPKMSKLQALAAARKKKAQEQSAASNAVAEAVVGLNELSVRDAA
GGNEGAAAANPPSKRFKTSAATSLGSLPSLLASKSQTAAARPSPGEAPERLPSAPPPTQP
APSPGLRGTPAESCEATATADDATTTAPSSFGDVLSGIRSSARPTTAAAESKPWDRVEID
FDGPLYGVDGRGKAPPEDDRSSLDWFEVRRRKRGDSDLYEDVVVLFPNLPQSARDAFAKP
SPDDIVLAAQAKSQTKAGQKTTPASKAKKTAPAAGTGDAKAEEPKAVEAPLPKSRNLDVL
SEFEKHKGKKSASFVVVGHVDAGKSTMMGRLLLDLSVVDQRTVEKLRKEAQTIGKSSFAL
AWVLDQRAEERTRGVTIDIATNRFETDKTIFTVLDAPGHQDFIPNMIAGASQADFAILVI
DAGVGAFEAGLKGQTREHSLLIRSMGVSRIIVAVNKLDMVSWSQERFEEIKNQMAGFLSM
ASFQAKNISFVPVSGLYGDNLVRRSANPAAAWYTGPTLVEELESSEPSARALTNPLRITA
SEVYRTMQSPVTVAGRVDAGSLQVGDALLVQPSGEKAYVKSLLADDAPAEWAVAGQSVVL
HLSHIDPIHVRVGDIICDPAKPVARSDRFTMKALAFDFLTPMQVDVHRGRLHAAGRIDAI
PALLDKVTGAVANKKPKIVKPGTVARIVVQLEAPVPLEAGQRVVLRSGGQTVAAGLLE
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgccaccagtacatccgcaacctggactaccaagatgttctggacgagtacgag
ggttactcggacgaggaagatgacgagctcagccccgaggaccgggagctcatgacccaa
ggcaccgctgccgtccaggccgccctgggcgtcgaggcgtccaaggtcaccgtcgcccag
atcgaggaagccctgtggcactactactacgacgtcgacaagtcggtcgcctacctcatc
tccaagtttgtcaacccggcgcccaagccggccaagacccaaccccatcagcgcaccggt
aagttggccacccgtgcattctccaccgtggaccatgccctcttgctcgaccacgatctt
ccgacggactgggcgacgaagacttcgaacctgacggacgcggcccctccagcgactttg
ggcttctcatcgagcgtaggatcgcggtgccaggcctcaagccggacgggcccatctctc
gcgcacctcttccacgacatgccgtggggcaacgttccagcgcaccgatccaccaccttc
gtcccgcccttgacacctcgaggcggcttgttgggcgggtctggcaccgccccgaaaatg
tccaagctgcaggccctcgcagccgcgcgcaaaaagaaggcgcaagaacagagcgccgct
agcaacgccgtggcggaagctgtcgtcggcttgaacgagctctcggtgcgggatgccgcc
ggcgggaacgagggcgcagcggcggccaacccgcccagcaaacgattcaaaacgtcggcc
gctacgtctttgggctccttaccttcgctgctggcctccaagtcacaaacggccgcggca
cggccgtctccgggcgaggcgccggaacgccttccgtcggctccaccacctacacaacct
gcgccctctccgggtcttcgcgggacgcctgcagagtcttgcgaggccaccgcgacagca
gatgatgccaccaccacagctccttcttcttttggcgacgttctcagcggcatccgatct
tctgcgcgaccaacgacagccgccgcggaatccaagccatgggaccgcgtcgagatcgac
tttgatggcccgctgtatggggttgacgggcgggggaaggcgccgccggaggatgatcga
tccagcctcgactggttcgaagtccgccgacgcaagcggggcgactcggacctgtacgag
gatgtggtggtgttgtttccgaacctccctcagtcggccagggacgccttcgcgaagccc
agtccggacgacatcgttctcgcagctcaggccaagtcgcagacaaaagccggacaaaag
acgacccccgcgtccaaggccaagaagacggcaccggccgcaggaaccggcgacgccaag
gccgaggagcccaaggccgtcgaagcgccgctgcccaagagtcgcaacctcgacgtcctc
tccgagtttgaaaagcacaaagggaaaaagagcgcgagcttcgtcgtggtcgggcacgtg
gacgccggaaagagcaccatgatgggccggctgctcctcgacctcagcgtggtggatcaa
cgcaccgtcgagaagctgcgcaaggaggcccagaccatcgggaagagctcgttcgccctc
gcctgggtcttggaccagcgcgccgaggagcggacccgcggcgtcaccatcgacatcgcc
accaaccggttcgagacggacaagacgatcttcaccgtcctggacgcgcccggccaccaa
gacttcatccccaacatgatcgccggcgccagccaggccgactttgccatcctcgtcatc
gacgccggcgtcggcgcgtttgaggccgggctcaagggccaaacgcgcgagcactcgctc
ctgatccgcagcatgggggtgtcgcgcatcattgtggccgtcaacaagctcgacatggtg
tcctggtcccaggagcggttcgaggagatcaagaaccagatggccgggttcctgtcgatg
gccagcttccaggccaaaaacatttcgttcgtccccgtgtcggggctttacggcgacaac
ctcgtccgacgatcggccaacccggccgcggcatggtacaccgggccgacgctggtggaa
gagctggagagctcggagcccagcgcccgggcgctgaccaacccgctgcgcatcacggcc
tcggaggtgtaccgcaccatgcagagccccgtcaccgtggccggacgcgtcgacgcggga
tccctgcaggtgggcgacgcgctgctcgtccagccgagcggcgagaaggcgtacgtcaag
tcgctcctcgccgacgacgcccccgccgagtgggccgtcgccggccagagcgtcgtcctc
cacctcagccacatcgacccgatccacgtccgcgtcggcgacatcatctgcgacccggcc
aagcccgtcgcccgctcggaccggttcaccatgaaggcgctggcctttgatttcctgacg
cccatgcaggtggacgttcaccggggcaggctgcacgcggccggcaggatcgacgccatc
ccggccctgctggacaaggtgacgggcgccgtggcgaacaagaagcccaagattgtcaag
ccgggcacggtggcgaggatcgtggtgcagctggaggcgccggtgccgctggaggcgggg
cagagggtggtgctgaggagcggaggccagacggtggccgctggcttgttggaatag
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