Remersonia thermophila: 98128634
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Entry
98128634 CDS
T10833
Symbol
VTJ83DRAFT_7195
Name
(RefSeq) hypothetical protein
KO
K02325
DNA polymerase epsilon subunit 2 [EC:
2.7.7.7
]
Organism
rthe Remersonia thermophila
Pathway
rthe03030
DNA replication
rthe03410
Base excision repair
rthe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
98128634 (VTJ83DRAFT_7195)
03410 Base excision repair
98128634 (VTJ83DRAFT_7195)
03420 Nucleotide excision repair
98128634 (VTJ83DRAFT_7195)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rthe03032
]
98128634 (VTJ83DRAFT_7195)
03400 DNA repair and recombination proteins [BR:
rthe03400
]
98128634 (VTJ83DRAFT_7195)
Enzymes [BR:
rthe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
98128634 (VTJ83DRAFT_7195)
DNA replication proteins [BR:
rthe03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
98128634 (VTJ83DRAFT_7195)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
98128634 (VTJ83DRAFT_7195)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Motif
Other DBs
NCBI-GeneID:
98128634
NCBI-ProteinID:
XP_070863412
JGI:
Remth1_7195
LinkDB
All DBs
Position
7:complement(join(825198..826869,826920..827698))
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AA seq
816 aa
AA seq
DB search
MMSIQSPEKSPRKKQPKSPEKGAKRAKPPPPPFFAARPKVTAPPSSDIPSSSPAFATPAH
PLRPFQAPAPAKAAVLPIILPPPTLRPLAFRTFTKKHSLTLTSSALQELATFIGRHCGSG
WKEEGLAEKVLEEVARTWKNRNGGVIVDGASSELKDILKTLEGNMSGGKIINGPRGLSRQ
NSLLLEQTEDADLSKTRLGLRPSSSLTPDDNQASFGMSGIGLDEEPDDAALQDARRWLKV
INAFDQPRYTYNVGKKHFEKINSPPSLLPPAARKTEVFRHRYNVIHQRLLRNEAFQTSAM
TSARVRTTTSSAMQSHKITPIANLLGRHGTTHMLLGMLIVLPTGNLAISDLTGAIALDLS
QAVSIPEDSAWFTPGMIVLVDGVYEEEEESVGMGLSGNAGVGGTIGGRFQGFFIGQPPCE
KRRATLGVSGLEGGADHTIGGGFGWIDFLGVGSERACGSRMRRIEQRLLRQPALADPDKP
SRGRVVIVGELNLDQPRTLQALKKILSLYATDPEGSTPMTFVLTGNFTTHAVMARGGSGG
SIEYKEFFDALASTLADFPMLLTTATFVFVPGDNDGWVSAFAGGASVPLPRKPVPDLFTS
RIRRVFAAANAEAGLSAAEGTGGEAVWTSNPGRISVFGPNHEIVLFRDDISARLRRSSVR
LKSKSAPADAAAAEDVSMSGANPAPSSPPAAASEAMDIDPSPQQPPPQQQQQEQLSHDIL
AARKLVKTVLDQGYLAPFRPAIKPVHWDYAPALHLYPLPTALVLVDTTAPPFAVTYEGCH
VMNPGSVLVPGRRGVARWVEYTVGVGKNGRVRECIF
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgatacaaagccccgaaaagagccctcggaaaaagcaacccaagagccctgaa
aagggcgcgaaacgggccaaacctccccccccgcccttttttgcagccaggccaaaagtc
accgctcccccctcgagcgatatcccctcctcgtcgcccgctttcgctacgccagcccat
cctctgcggccgtttcaggcccccgccccagccaaagctgccgttctccccatcatcctc
cctccgccgacgctgcgccccctggccttccgcacgttcaccaagaaacacagcctgacc
ctgacatcctcagcgctgcaagaactagccaccttcatcgggagacactgcggctcagga
tggaaggaggaaggcctggccgagaaggtcctggaggaggttgcgcggacctggaagaac
cgcaatgggggtgtcattgtcgacggcgccagctcggagctgaaggacatcctgaagacg
ctggaggggaacatgagcggcggaaaaatcatcaacgggccgcgcggcctgagtcggcag
aacagcttgctgctcgagcaaaccgaggatgcggacctctccaagacccgcctcggcctg
agaccctccagctcgctcaccccagacgacaaccaggccagcttcggcatgtcgggcatc
ggcttggacgaggagcccgacgatgcagcgctgcaggatgccaggcggtggctgaaggtc
atcaacgcttttgaccagccccgatacacctacaatgttgggaaaaagcactttgaaaaa
atcaactcgccaccatccctgctgccgccggctgctcgcaagaccgaggtcttccgccac
cggtacaacgtcatccaccaacggctgcttcgtaacgaggcgtttcagacgtcagccatg
acaagcgcgagggttcggaccaccacatcctctgccatgcagtctcacaagatcacgcct
atcgcgaacctgcttggccgacacggcaccacgcacatgcttctcggcatgcttatcgtt
ctccccacgggcaacctcgccatcagcgacctcacgggcgccatcgcgctggacctgtca
caagccgtgtccatccccgaggactcggcctggttcacccccggcatgatcgttctggtc
gacggcgtctacgaggaggaagaggagtccgtcgggatggggttgagcgggaatgccggc
gtgggcggcacgatcggcggccggtttcagggcttcttcatcggccagccgccgtgcgag
aagcgacgtgccacgctcggggtgagcggcttggagggcggcgcggaccacaccatcggc
ggcgggttcgggtggatcgacttcctcggcgtcggcagcgagcgggcatgcgggtcccgg
atgcgcaggatagagcagaggctgctccgccagccggcgctggccgatccggacaagccc
agccgcggtcgcgttgtcatcgtcggcgagctgaacctcgatcagccacgcaccctgcaa
gcgctcaagaagatcctgtcgctttacgccacggatccggagggctccacgcccatgact
ttcgtcctgaccggcaacttcaccacgcacgccgtcatggcccgcggaggcagcggcggc
agcatagagtacaaggagttctttgacgccttggcctccacgctcgcagatttccccatg
ctcctgaccacggccacctttgtctttgtcccgggagacaacgatggctgggtctcggca
tttgcgggtggtgcttcggtcccgctgcctcggaagccggttccggacctcttcacatcc
cgcatccggcgcgtctttgctgctgccaacgccgaggcgggtttgtccgccgccgaaggg
accggcggagaggccgtctggacctcgaaccccggccgcatctccgtctttggtcccaac
catgaaatcgtcctcttccgcgacgacatctcggcccgcctccgccgctcttcggttcgt
ctcaagtccaagtccgccccggccgacgccgctgcggccgaggacgtgagcatgtcgggc
gccaaccccgcgccgtcctccccgcccgcggcggcttcagaagccatggacatcgacccg
tccccgcaacagcccccgccgcaacaacagcaacaagagcaactctcccacgacatcctt
gctgcccgcaaactcgtcaagacggttctcgaccagggctatctggctcccttccgcccc
gccatcaagcctgtgcactgggattatgctcccgcgttgcacctgtacccgctgccgacg
gcattggtgctcgtcgatacgacggccccgccgttcgctgtgacgtatgaggggtgccat
gtgatgaacccggggagtgtgcttgttcctggacggaggggcgtggcgaggtgggtggag
tatacggtgggcgtggggaagaatgggagggtgagggagtgtattttctag
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