Remersonia thermophila: 98128766
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Entry
98128766 CDS
T10833
Symbol
VTJ83DRAFT_7313
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
rthe Remersonia thermophila
Pathway
rthe03013
Nucleocytoplasmic transport
rthe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
98128766 (VTJ83DRAFT_7313)
03015 mRNA surveillance pathway
98128766 (VTJ83DRAFT_7313)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98128766 (VTJ83DRAFT_7313)
Enzymes [BR:
rthe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
98128766 (VTJ83DRAFT_7313)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
98128766 (VTJ83DRAFT_7313)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
CMS1
PG_binding_5
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
98128766
NCBI-ProteinID:
XP_070863530
JGI:
Remth1_7313
UniProt:
A0ABR4D342
LinkDB
All DBs
Position
7:complement(join(1240608..1241096,1241200..1241437,1241502..1242229))
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AA seq
484 aa
AA seq
DB search
MADLASRITKPADETPVNDAPAAAGEASTGNNGAEDNVEDDGVQRGLIETSYEVEVKLAD
LQADKDSPLHSGISSFDELGLSRQILDGLLAVNFKKPSKIQARALPLMLSDPPTNMIAQS
QSGTGKTAAFVLTVLSRVDFSKPTQPQALLLAPSRELARQIQGVIQTIGRFVDNLIVEAA
IPGGISRETGVQSAVVVGTPGTVMDLIRRRQFNVSQLKVLVIDEADNMLDQQGLGDQCLR
VKNLLPRTIQILLFSATFPDKVLNYARKFAPNANEIKLRHQELTVKGISQMYMDCPDEAQ
KYDILCKLYGLMTIGSSVIFVKTRESANEIQRRMEADGHKVSVLHGAHEGQNRDALLDDF
RMGRSKVLITTNVLARGIDVSSVSMVINYDIPMKMMRGREEPDMETYLHRIGRTGRFGRV
GVSISFVYDRKSFEALSQIADFYGIDLVQLSPDDWDATEQKVQDVIKSSRARPDYAPNVM
DKKD
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttggcgagtcgcatcacgaagcccgccgacgagacgcccgtcaacgacgcg
cccgccgccgcgggcgaggcttcgaccgggaacaacggcgccgaggacaatgtcgaggat
gacggggttcagcgcggtcttatcgagacgtcgtacgaagtcgaggtgaagctggccgac
ttgcaggccgataaggacagccctctgcactcgggcatttcgtccttcgatgagctcggg
ctctcgcggcagatcctcgacggccttctcgccgtcaacttcaagaagccctccaagatc
caggcgagggccctgccgctcatgcttagcgaccccccgaccaacatgatcgcccaatcg
cagtcgggcaccggcaagacggccgccttcgtcctcaccgttctgtcgcgcgtcgacttc
tccaaaccgacacagccgcaagccctgctcctcgcgcccagcagagagcttgcccgccag
atccagggcgtcatccagaccatcggacgcttcgtcgataacctcatcgtcgaggcggcg
atccccggcggcatctcgcgcgagactggcgtccaatcggccgtcgtggtcggcactccg
ggcaccgtcatggatctgatccggcgcaggcagttcaacgtgtcgcagctcaaggttctc
gtcatcgacgaggcggacaacatgctggaccagcagggtctgggagatcagtgtctccgg
gttaagaacctcctccctcggaccattcagatcctgttgttctcggccacgttccccgac
aaggtcctgaactacgctcggaagttcgctcccaacgccaacgagatcaagctccgccac
caagagctcaccgtcaagggcatttcgcagatgtacatggattgcccggacgaggctcag
aagtacgacatcctgtgcaagctgtatggcctgatgaccattggttcttcggttatcttt
gtcaagacccgcgagagcgccaacgagattcagcggcggatggaagccgacgggcacaag
gtgtctgtgctgcacggcgcccacgaagggcagaaccgcgatgcgctgcttgacgacttc
aggatgggccggtccaaggtgctcatcacgaccaacgtgcttgcgcgcggtatcgacgtc
tcgagcgtgtccatggtgatcaactacgacatccccatgaagatgatgcgcggccgcgag
gagcccgacatggagacgtacctgcaccgtatcgggcgcacgggccgcttcggccgcgtc
ggcgtcagcatcagcttcgtctacgaccgtaagagcttcgaggcgctgtcgcagatcgcc
gacttctacggcatcgatttggtgcagctgtcgcccgacgattgggacgcgaccgagcag
aaggttcaggacgtcatcaagtcgagccgcgcacgccccgactatgcccccaacgtgatg
gacaagaaggactag
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