Remersonia thermophila: 98129002
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Entry
98129002 CDS
T10833
Symbol
VTJ83DRAFT_7526
Name
(RefSeq) hypothetical protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
rthe Remersonia thermophila
Pathway
rthe03250
Viral life cycle - HIV-1
rthe03272
Virion - Hepatitis viruses
rthe04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
98129002 (VTJ83DRAFT_7526)
03272 Virion - Hepatitis viruses
98129002 (VTJ83DRAFT_7526)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
98129002 (VTJ83DRAFT_7526)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rthe04131
]
98129002 (VTJ83DRAFT_7526)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rthe04147
]
98129002 (VTJ83DRAFT_7526)
Membrane trafficking [BR:
rthe04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
98129002 (VTJ83DRAFT_7526)
Exosome [BR:
rthe04147
]
Exosomal proteins
Proteins found in most exosomes
98129002 (VTJ83DRAFT_7526)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
Motif
Other DBs
NCBI-GeneID:
98129002
NCBI-ProteinID:
XP_070863743
JGI:
Remth1_7526
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All DBs
Position
7:complement(join(2064195..2065508,2065569..2065807,2065891..2065978,2066099..2066149))
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AA seq
563 aa
AA seq
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MGVPQHVLNWLYSVLTSEYHDVNRTYNDVAQALAQYPSLSPRTDVHTFPDGTSALLLHLS
GTLPVVFRGVTYRFPISLWVPHAYPRQPPLVYVTPTETMLVRPGQHVDPQGQVYHPYLVG
WATFWDKSTVLDFLAILQDVFAKEPPVVARQPGLLQPRPTPTPPPPPPVPPLPPDLAPRP
ASQARPAPAETPTPPPPPKPVPHGAPQQQPSPAPVQSPPAGSHAPPPPPKIGGPAGQPAP
PGTRSPPPTQHPQQPEHHAPPRQPPASRYETAPPLPPHAAQASHPAQPPWSLAPQHLPPP
HNPPQPPPPHHGVSPPAGVPPRPVPAPPVDPRMSSLPAQPPLPYGTPPPPTWQQPPAPVA
APQPAPKPPPPPNLLDDDLTLPIPSASAAPPPPIPPNPEKDQLLHQLAQTLHAHRQTARA
QNEASLQGLGAQRAAMAQAAAQLQAESAQLTQLSALLTSNTAILQDSLRQADQLIQDSAS
LPAPDIDELLVAPTVVGNQLYELVAEERALADAIFVLGRAVERGRVAPQTFAKMTRQLAR
EWYLKKALVKKIGRGMGLVEYRV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgggggttcctcagcatgtcctcaactggctgtacagcgtcctgacaagcgaataccac
gatgtcaaccgcacctacaacgacgtagcccaagcgctggcccagtacccctcgctgtcg
ccccggaccgatgtgcacaccttccccgatggcacctcggccctcttgctacacctctca
ggcacgctccccgtcgtcttccgcggcgtcacgtaccgcttccccatctcgctatgggtt
cctcacgcctaccctcgccagccgcccctcgtctacgtgaccccgacggaaaccatgttg
gtgcgtcccggccagcatgtcgaccctcaaggccaggtctatcatccctaccttgtcggc
tgggccaccttctgggataaatccaccgtcttggacttcctcgccatcctgcaggacgtg
ttcgccaaggagccgcccgtcgtcgcccgccagccggggctgctgcagccacgcccgaca
cctacaccccctccgccgcctccagtcccccccttaccgccggacctcgctccgagacct
gccagccaagcacggcccgcacctgcagagaccccgactccgccgccgcccccgaaaccg
gttccgcatggcgcaccgcaacaacagccctcacccgccccggttcagagtccgcctgct
ggcagtcatgcccctcctccgccgcccaagatcggcggccctgcaggtcagccggcaccc
cctgggacgcggtcgccgccacccacacagcaccctcagcaacccgaacaccatgcacca
cctcggcagccacccgcgtcgcgctacgagaccgcacctccgcttcctccgcatgccgcc
caagcctctcacccggcgcagcctccgtggtctctggccccgcaacatcttcctcctccg
cacaacccgccgcaacctcctccgccacaccacggagtttctcccccggccggtgtccca
cctcgtccggtccctgcgccgcccgtcgaccctcgcatgtcgtcgctgccggcgcagccg
ccgctgccctacggcacccctcctccgccgacctggcagcagcctcctgcccccgtcgct
gccccccagcccgctccgaaacctcccccgccgcccaacctgctcgacgacgacctcacc
ctccccatcccctccgcctccgccgccccgccgccgcccatcccgccgaaccccgagaaa
gaccagctcctccaccagctcgcccagaccctgcacgcccaccgccaaacggcgcgcgct
caaaacgaggcgtccctgcagggcctcggggcccagcgcgccgccatggcccaggccgcg
gcccagctccaggccgagtcggcccagctcacccagctgtccgccctgctcacctccaac
acggccatcctgcaggactcgctgcgccaggccgaccagctgatccaggactcggcgagc
ctgcccgcgcccgacattgacgagctgctcgtcgcccccaccgtcgtcggcaaccagctg
tacgagctcgtcgccgaggagcgggcgctcgccgacgccatctttgtcctcggaagggcc
gtcgagcgcggacgggtcgcgccccagacctttgccaagatgacgaggcagctggcgcgc
gagtggtacctcaagaaggcgctcgtcaagaagattggcaggggcatggggctggtggag
taccgcgtttga
DBGET
integrated database retrieval system
