Remersonia thermophila: 98129020
Help
Entry
98129020 CDS
T10833
Symbol
VTJ83DRAFT_7542
Name
(RefSeq) hypothetical protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rthe Remersonia thermophila
Pathway
rthe00260
Glycine, serine and threonine metabolism
rthe00460
Cyanoamino acid metabolism
rthe00630
Glyoxylate and dicarboxylate metabolism
rthe00670
One carbon pool by folate
rthe00680
Methane metabolism
rthe01100
Metabolic pathways
rthe01110
Biosynthesis of secondary metabolites
rthe01200
Carbon metabolism
rthe01230
Biosynthesis of amino acids
rthe01240
Biosynthesis of cofactors
rthe04981
Folate transport and metabolism
Module
rthe_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
98129020 (VTJ83DRAFT_7542)
09102 Energy metabolism
00680 Methane metabolism
98129020 (VTJ83DRAFT_7542)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
98129020 (VTJ83DRAFT_7542)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
98129020 (VTJ83DRAFT_7542)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
98129020 (VTJ83DRAFT_7542)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
98129020 (VTJ83DRAFT_7542)
Enzymes [BR:
rthe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
98129020 (VTJ83DRAFT_7542)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Auxin_repressed
Med3
Mucin
Motif
Other DBs
NCBI-GeneID:
98129020
NCBI-ProteinID:
XP_070863759
JGI:
Remth1_7542
LinkDB
All DBs
Position
7:join(2124312..2124593,2124686..2124742,2124841..2124934,2125028..2125165,2125235..2126388)
Genome browser
AA seq
574 aa
AA seq
DB search
MSAFTCSVPASLRARSARAALRSLQHATTTTRTTAGSAASRLVRRSSSMATTTTTTTTTT
RPAAPTAATTTAKEPWTQRRGMASMTSQSDSQQKMLAAHLQQADPVMYDIIEKEKLRQKR
FINLIPSENFTSQAVLDALGSPMQNKYSEGYPGARYYGGNEFIDASERLCQQRALETFGL
DAREWGVNVQALSGAPANLYVYSALMETHDRLMGLDLPHGGHLSHGYQTATKKISFVSKY
FETLPYRLDESTGLIDYDKLEQTALLYRPKIIVAGTSAYSRLIDYARMRDICDKVNAYLL
ADMAHISGLVAAKVIPGPFGYADIVTTTSHKSLRGPRGALIFFRRGVRRTHSKSGVEELY
NLETPINQSVFPGHQGGPHNHTIAALSVALKQAQTPEFRTYQSQVLANAKALARRLGEPK
EKGGLGYRIVSGGTDNHLVLVDLKPQGIDGARVERVLELVGVAANKNTVPGDRSALTPGG
LRMGSPAMTTRGFAEEDFARVADIVDRAVTIAVRVDKAARKASQDRGEDPKAQGRLRTFN
DFLGTGEADPEIVQLRAEVADWVGTYPLPWEAHP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcattcacatgctccgttcccgcctcgctgcgggcgcgcagcgcccgtgccgcc
ctgcgctccctgcagcacgcgacgaccacgacgaggacaacggccgggtctgcggccagc
cggttggtgcggaggtcgtctagcatggcgacaacaacgacgacgacgacgacgaccaca
aggcctgctgctcccacggctgccaccaccacggccaaggagccatggacccagcgcagg
ggaatggcgtccatgacgtcgcaaagcgatagccagcaaaagatgctcgcggcgcatctt
cagcaggcggatccggtcatgtacgacattatcgaaaaggagaaactcaggcaaaagcgc
tttatcaacctgatcccctccgagaacttcacctcgcaggccgtgctggacgcgctaggg
agccccatgcagaataaatactcggaagggtatcctggcgcgcggtactacggcggcaac
gagttcatcgacgcctcggagcgcctgtgccagcagcgcgccctcgagacctttggcctg
gatgccagggagtggggtgtcaacgttcaagccctctcgggcgcccccgccaacctctac
gtctactcggccctgatggagacgcacgaccgcctgatgggcctcgacctccctcacggc
ggccacctctcccacggctaccagaccgccaccaagaagatctcgttcgtgtccaagtac
tttgagacgctgccctaccgcctcgacgagtcgacgggcctcatcgactacgacaagctc
gagcagacggccctcctctaccgccccaagatcatcgtcgccggcacctcggcctacagc
cgcctcatcgactacgcccgcatgcgcgacatttgcgacaaggtcaacgcctacctcctc
gccgacatggcccacatctcgggcctggtcgccgccaaggtgatccccggccccttcggc
tacgccgacatcgtcaccaccacgagccacaagtcgctgcgcgggccccgcggcgccctc
atcttcttccgccgcggcgtccgccgcacccactccaagtcgggcgtcgaggagctctac
aacctcgagacccccatcaaccagtccgtcttccccggccaccagggcgggccccacaac
cacaccatcgccgccctgtcggtcgccctcaagcaggcccagacccccgagttccgcacc
taccagtcccaggtcctggccaacgccaaggccctggcccgccgcctcggcgagcccaag
gagaagggcggcctcggctaccgcatcgtctcgggcggcaccgacaaccacctcgtcctc
gtcgacctcaagccccagggcatcgacggcgcccgcgtcgagcgcgtcctcgagctcgtc
ggcgtcgccgccaacaagaacacggtcccgggcgaccgctccgccctgaccccggggggg
ctgcgcatgggcagccccgccatgacgacgcgcggcttcgccgaggaggactttgcccgc
gtggccgacattgtggaccgcgccgtcaccatcgccgtccgggtggacaaggcggcgcgc
aaggcgagccaggaccgcggcgaggaccccaaggcccagggccggctcaggacgttcaac
gactttttgggcacgggcgaggccgacccggaaatcgtccagctccgggccgaggtggcg
gattgggtcgggacgtatcccctgccttgggaggcccacccttga
DBGET
integrated database retrieval system
