Remersonia thermophila: 98129044
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Entry
98129044 CDS
T10833
Symbol
VTJ83DRAFT_7564
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
rthe Remersonia thermophila
Pathway
rthe03020
RNA polymerase
rthe03420
Nucleotide excision repair
Brite
Enzymes [BR:
rthe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
98129044 (VTJ83DRAFT_7564)
Transcription machinery [BR:
rthe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
98129044 (VTJ83DRAFT_7564)
DNA repair and recombination proteins [BR:
rthe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
98129044 (VTJ83DRAFT_7564)
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
98129044
NCBI-ProteinID:
XP_070863781
JGI:
Remth1_7564
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Position
7:join(2198377..2202053,2202119..2202281)
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AA seq
1279 aa
AA seq
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MTDYANQSHYSSYGEPRDLDDGFGPEAGLDDPAGLGGEDTITPEDCWEVISSYFEAKGLV
SQQIDSFNEFTSTTIQSLVDEYADLTLDHPNPGDDSGRDIAMRRYDIHFDNVLISKPTLT
EATGETTSLLPYECRDRNLTYSAPMYCRVMKRARVAINEEIPLKDMDDEQREYMARTGEV
PKRIVWVEEDTGPSEGGGKDGEKGDLIFLGKLPVMVKSQVCHLHGEDDESLFLLNECPYD
QGGYFIINGSEKVLIAQERSAANIVQVFKKPPGGSVSYQAEIRSALEKGSRLISSLQMKL
HTKGSTEKGRYPNTVSVTLPYVREDVSLVIVFRALGIVSDEDILNHICYDRTDTQMLEAL
RPCIEEAFCIQDREIALDFIGKRGNGNAGQNRVNRVRAAKDLLQKEMLPHISQTEGCETR
KAFFLGYMVHKLLQCALGRRDPDDRDHFGKKRLDLAGPLLAKLFRGVIRRMTQDLMSYMK
RCIDTNKNFSLALGIKHATLTNGLKYSLATGNWGDQKKAMSSVAGVSQVLNRYTFASTLS
HLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMCFVSVGTPADP
IVEFMIARGMEVLEEYEPLRHPNATKVFVNGTWVGVHHDPKHLVTLVQGLRRKNVISFEV
SLVRDIRDREFKIFSDAGRVMRPLFTVEQEANGDSGVDVGQLVLTKEHIARLEADKELGK
FHPDYWGWYGLLRSGAIEYLDAEEEETAMIAMTPDDLDRFRLSKMGIEVEDNSGVGNNRI
RTKPNPSTHMYTHCEIHPSMLLGICASIIPFPDHNQSPRNTYQSAMGKQAMGTFLTNYSR
RMDTMANVLYYPQKPLATTRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSID
RGLFRSLFFRSYTDCEKRVGINIVEKFEKPNRSDTLRLKHSTYDKLDADGIVSPGVRVSG
DDIIIGKTCPISPDNAEMGQRATQHVKRDASTPLRSTENGIVDQVVVTTNQDGMRYVKVR
VRTTKIPQIGDKFASRHGQKGTIGVTYRQEDMPFTCEGITPDIIINPHAIPSRMTIAHLI
ECLLSKVSTLKGMEGDATPFTDVTVDSVSDLLREHGYQSRGFEVMYHGHTGKKLRAQVFF
GPTYYQRLRHMVDDKIHARARGPLQIMTRQPVEGRARDGGLRFGEMERDCMIAHGAASFL
KERLFEVSDAFRVHICEICGLMTPIANLTKQSFECRPCKNKTKIAQVHLPYAAKLLFQEL
MAMNIAARMFTTRSGISVR
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactacgcgaaccagagccactacagcagttacggcgagccccgcgacttggac
gatggattcgggccggaggcaggccttgacgacccggcgggcttgggcggcgaggacacc
atcacgcccgaggactgctgggaggtgatttcgtcgtactttgaggccaagggtctcgtc
tcgcaacagatagattcattcaacgagttcacctctaccacgatccagtccctcgtcgac
gaatatgccgacctcaccctcgaccacccgaacccgggcgacgacagcggccgcgacatc
gccatgcggcgatacgatatccacttcgataacgtcctcatctccaagccgaccctcacc
gaagccaccggcgagaccacgagtttgctcccgtacgagtgccgcgaccgcaaccttacc
tactctgcgcccatgtactgccgcgtgatgaagcgcgcacgcgtcgccatcaacgaggag
attccgctcaaggatatggacgacgagcagcgcgagtacatggcgcgtacaggcgaggtg
cccaagcgcatcgtttgggtcgaggaggacacgggcccgtccgagggcggtggcaaggac
ggcgagaagggcgatctcatctttctcggcaagctgcccgtcatggtcaagtcgcaggtt
tgccacctgcacggcgaggacgatgagtcgctgttcctgctcaacgagtgcccttacgac
cagggcggttatttcatcatcaacggcagcgagaaggtgctcatcgcccaggagcgctct
gccgccaacatcgtccaggtgttcaagaaacccccaggtggcagcgtgtcgtaccaggct
gagatccggtctgccctcgagaagggctcgcgcctgatctcgtccttgcagatgaagctg
cacacgaagggctcgacggagaagggccgttatcccaacacggtcagcgtcacgctgccg
tacgtccgcgaagacgtctctctcgtcatcgtgttccgtgccctcggcatcgtgtcggac
gaggatattctcaaccacatctgctatgacaggaccgacacccagatgctcgaggcgctg
cggccctgcattgaggaggccttctgcatccaagaccgcgagatcgctctcgacttcatc
ggcaagcgcggcaacggcaacgccggtcaaaaccgcgtcaaccgcgtccgcgccgccaag
gacctgctccagaaggagatgctcccccacatctcccagaccgagggttgcgagacgcgc
aaggccttcttcctcggctacatggtgcacaagctgctgcagtgcgccctgggccgccgc
gacccggacgatcgtgaccatttcggaaagaagcgtcttgatcttgccggtccgctgctg
gccaagctgttccgcggcgtcattcggcgcatgacacaggatctcatgtcgtacatgaag
cgctgcatcgacaccaacaagaacttctccctggccctcggcatcaagcatgcaaccctc
accaacggcctcaagtactcgctggccacgggtaactggggcgaccagaagaaggccatg
agctcggtggcaggtgtgtcgcaggtgctgaaccgctacacgttcgcctcgacgctgtct
cacttgcggcgcaccaacacgcccatcggtcgcgacggcaagctcgccaagccgcgccag
ctgcacaacacacactggggtctcgtgtgcccggccgaaactcccgagggacaggcctgc
ggtctcgtcaagaacctgtcgctcatgtgcttcgtcagcgtgggcacgcccgcagatccg
atcgtcgagttcatgatcgcccgtggcatggaggtgctcgaagagtacgagccgctgcgc
caccccaacgccaccaaggtgttcgtcaacggcacctgggtgggtgtgcaccatgacccc
aagcatttggtgaccttggtgcagggcttgcgccgcaagaatgtcatctcgttcgaggtg
tcgctggtgcgcgacatccgtgaccgcgagttcaagatcttctcagacgcgggccgcgtc
atgcgcccgctctttaccgtcgagcaggaggcgaatggcgacagcggtgtcgatgttggc
cagctggtgctgacaaaggagcacatcgccaggctcgaggcagacaaggagctgggcaag
ttccacccagactactggggctggtatggcctgcttcggtctggcgccatcgagtacttg
gatgccgaggaggaggagacggccatgattgccatgacgcctgatgacctggacaggttc
cgcctgagcaagatgggcatcgaggtcgaggacaactcgggcgttggcaacaaccgcatc
aggacgaagccgaatccgtcgacgcacatgtacacgcactgcgagatccaccccagcatg
ctcctcggtatctgcgccagcatcatcccgttccctgaccacaaccagtctccccgtaat
acctaccagtcggccatgggcaaacaagccatgggaaccttcctcaccaactactcgcgg
cgcatggacacgatggccaacgtgctctactacccgcagaagccgctggcgacgacgcgg
tcgatggagttcctcaagttccgcgagcttcccgctggccagaacgccatcgtcgccatc
gcttgctattccggctacaaccaagaagactcggtcatcatgaaccagagcagcatcgac
cgtggcttgttccgcagtctgttcttccggtcgtacacggactgcgagaagcgcgtcggc
atcaacatcgtcgagaagtttgagaagcccaaccgcagcgacacgctgcgcctcaagcac
agcacttacgacaagctcgacgccgacggcatcgtgtcgcccggcgtgcgcgtctcgggc
gacgacatcatcatcggcaagacgtgccccatcagccccgacaatgccgagatgggccag
cgggcgacgcagcacgtcaagcgggacgcctcgacgccgctgcgcagcaccgaaaacggc
atcgtcgaccaggtggtcgtcaccaccaaccaggacggcatgcgctacgtaaaagtgcgc
gtccgcacgaccaagatcccgcagatcggcgacaagttcgcctcgcgtcacggtcagaaa
ggcaccatcggtgtcacgtaccgccaggaggatatgccgtttacgtgcgagggcatcacc
cccgacatcatcatcaacccgcacgccattccgtcgcgtatgaccatcgcccacttgatc
gagtgtttgctgtcgaaggtctcgaccctcaagggcatggagggcgacgccacccccttc
accgacgtcaccgtggacagcgtctcggacctcctgcgcgagcatggctaccaatcgcgt
ggcttcgaggtcatgtaccacggtcacaccggcaagaagctgcgcgcgcaggtcttcttt
ggtcctacctactaccagcgcctcaggcacatggtggatgacaagattcatgcccgtgcg
cgcggcccgctgcagatcatgacccgacagcccgtggaaggtcgtgcccgcgacggcggt
ctgcgtttcggtgaaatggagcgcgattgcatgattgcacacggcgcagcgagcttcctc
aaggaaaggctgtttgaggtttcggatgcgttcagggtgcacatttgcgagatttgcggg
ttgatgacacccattgcgaacctgaccaagcaatccttcgagtgccggccatgcaagaac
aagaccaagatcgcccaggtccacctgccgtacgccgccaagctgttgttccaagagctg
atggccatgaacattgccgcgcgcatgtttacgacgaggtcgggcatctcggtgcgctaa
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