Remersonia thermophila: 98129266
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Entry
98129266 CDS
T10833
Symbol
VTJ83DRAFT_925
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
rthe Remersonia thermophila
Pathway
rthe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rthe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
98129266 (VTJ83DRAFT_925)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rthe03019
]
98129266 (VTJ83DRAFT_925)
03009 Ribosome biogenesis [BR:
rthe03009
]
98129266 (VTJ83DRAFT_925)
04131 Membrane trafficking [BR:
rthe04131
]
98129266 (VTJ83DRAFT_925)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rthe04147
]
98129266 (VTJ83DRAFT_925)
Messenger RNA biogenesis [BR:
rthe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
98129266 (VTJ83DRAFT_925)
Ribosome biogenesis [BR:
rthe03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
98129266 (VTJ83DRAFT_925)
Membrane trafficking [BR:
rthe04131
]
SNARE
SNARE associated proteins
Others
98129266 (VTJ83DRAFT_925)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
98129266 (VTJ83DRAFT_925)
Exosome [BR:
rthe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
98129266 (VTJ83DRAFT_925)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_5
AAA_2
AAA_33
TIP49
AAA_22
AAA_14
CDC48_2
nSTAND3
RNA_helicase
Mg_chelatase
NPHP3_N
AAA_7
Parvo_NS1
AAA_28
AAA_25
ATPase
AAA_18
IstB_IS21
DUF815
AAA_17
AAA_24
Vps4_C
AAA_lid_PRS2_C
ResIII
Sigma54_activat
ABC_tran
TsaE
AAA_30
NACHT
NB-ARC
Sigma54_activ_2
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
98129266
NCBI-ProteinID:
XP_070870278
JGI:
Remth1_925
LinkDB
All DBs
Position
1:complement(join(3293092..3293684,3293753..3295244,3295319..3295568,3295640..3295723,3295797..3295852))
Genome browser
AA seq
824 aa
AA seq
DB search
MAPDPTPDHHEHKKKVNLTDASGAERKNEDDTATAILKKKKKPNQLMVTDAVNDDNSIIA
LSNNTMEALQLFRGDTVLVRGKKRKDTVLIVLADDDLDDGSARINRVVRHNLRVKHGDII
TIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDLFIVRGGMRQ
VEFKVVEVDPPEYGIVAQDTVIHCEGEPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMV
ELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAG
ESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGMKARSN
VVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADDVDLEQIA
AETHGYVGSDIAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMDNFRFALGVSN
PSALREVAVVEVPNVRWEDIGGLETVKQELRESVQYPVDHPEKFLKFGMSPSRGVLFYGP
PGTGKTMLAKAVANECSANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDEL
DSIAKARGGSLGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRL
DSLIYVPLPDEPGRLGILKAQLRKTPVAPDVDLAYIASKTHGFSGADLGFITQRAVKLAI
KESITLDIQRQKEREAAGEDVEMEDDEDPVPELTKRHFEEAMKMARRSVSDVEIRRYEAF
AQQMKNAGPGAYFKFPEGGVEGTSGSGSGGNAFGDAGNDDGLYD
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggctccggacccaactcccgatcatcatgagcacaagaagaaggtcaacctgaccgat
gcctccggcgccgagcggaagaacgaagatgacacggccaccgccattctcaagaagaag
aagaagcccaaccagctgatggtcaccgacgccgtcaacgatgacaactccatcatcgct
ctctcaaacaacaccatggaggctctccagctcttccgtggcgacaccgtgctggtccgc
ggcaagaagaggaaggacacggtcttgatcgtcctcgccgacgacgatctcgatgacggc
agcgcccgcatcaacagggtcgtccgccacaacctgcgcgtcaagcacggcgacatcatc
accatccacccctgcccggacatcaaatatgccaagcggatcgccgtcctccccatcgcc
gacaccgtcgaaggtctcaccggctcgctgttcgacgtcttcctggcgccttacttccgg
gaagcctaccggcctgtccgccagggcgacctcttcatcgtgcgcggtggcatgaggcaa
gtggagttcaaggtggtcgaggtcgacccgcccgagtacggcatcgtggcccaggacacg
gtcatccactgcgagggcgagcccatccagcgcgacgaggaggagaacaacctcaacgag
gtcggctacgacgatatcggcggctgccgcaagcagatggcccagatccgtgagatggtg
gagctgccgcttcgtcacccccagctcttcaagtccatcggtatcaagccgccccgcggc
gtgctcctctacgggccgcccggtaccggtaagacgctgatggcccgcgccgtcgccaac
gagacgggcgccttcttcttcctcatcaacggccccgagatcatgtccaagatggctggc
gaatccgagtccaacctgcgcaaggccttcgaggaggccgagaagaactcccccgccatc
atcttcattgacgagatcgactcgatcgctcccaagcgtgagaagaccaacggcgaggtg
gagcgccgcgtcgtgtcccagctgctcaccctgatggacggcatgaaggcccgctccaac
gtcgtcgtcatggccgccaccaaccggcccaactcgatcgaccccgccctgcgccgcttc
ggccgcttcgatcgcgaggtggacattggcatccccgaccctaccggccgcctcgagatc
ctgcagatccacaccaagaacatgaagctggccgacgatgtcgacctggagcagatcgcc
gccgagacccacggctacgtcggctcggatatcgccgccctctgctccgaggccgccatg
cagcagattcgtgagaagatggatctcatcgacctcgacgaggacaccatcgacgctgag
gttctcgactcgctcggcgtgaccatggacaacttccgctttgctcttggcgtctcgaac
ccctcggccctgcgcgaggttgccgtcgtcgaggttcccaacgttcgctgggaggatatt
ggcggtctcgagacggtcaagcaggagctccgggagagcgtgcagtaccctgtcgaccat
cccgagaagttcctcaagttcggcatgtcgccgtctcgcggtgtgcttttctatggccct
cccggtacgggtaagacgatgttggccaaggccgttgccaacgagtgctcggccaacttc
atctcggtcaagggtcccgagctgctctccatgtggttcggcgagtctgagagcaacatt
cgcgacatcttcgacaaggcccgcgccgctgctccttgcgtcgtgttcctggacgagctg
gattccatcgccaaggcccgcggtggctctcttggagatgccggtggcgcctcggatcgt
gtcgtcaaccagctcctgacggaaatggacggcatgacctccaagaagaacgtcttcgtt
atcggcgccacgaaccgtcccgagcagctcgaccccgccctgtgccgtccgggccgtctc
gactcgctcatttacgtgcccctgcctgacgagccgggccgcctcggcatccttaaggcc
cagctgcgcaagacgcccgtcgcgcccgacgtcgacctggcctacatcgcatccaagacg
cacggcttctcgggtgccgacctgggcttcatcacgcagcgcgccgtcaagctggccatc
aaggagtccatcaccctggacatccagcgccagaaggagcgcgaggcggccggcgaggac
gttgagatggaggacgacgaggaccccgtccccgagctgaccaagcgccacttcgaggag
gccatgaagatggcccgccgctcggttagcgacgttgagattcgtcgttacgaggctttc
gcccagcagatgaagaacgccggtccgggtgcttacttcaagttccccgagggtggcgtg
gagggtacttctggcagcggttcgggtggtaatgcctttggcgatgcgggcaatgacgat
ggtctctacgattaa
DBGET
integrated database retrieval system
