KEGG   Remersonia thermophila: 98129342
Entry
98129342          CDS       T10833                                 
Symbol
VTJ83DRAFT_994
Name
(RefSeq) hypothetical protein
  KO
K14550  U3 small nucleolar RNA-associated protein 10
Organism
rthe  Remersonia thermophila
Pathway
rthe03008  Ribosome biogenesis in eukaryotes
Brite
Ribosome biogenesis [BR:rthe03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    98129342 (VTJ83DRAFT_994)
SSDB
Other DBs
NCBI-GeneID: 98129342
NCBI-ProteinID: XP_070870347
JGI: Remth1_994
LinkDB
Position
1:complement(join(3520630..3521538,3521593..3525700,3525757..3526133))
AA seq 1797 aa
MATSLAAQLAQIAANSRTSLNVKALKASHSKSLIWEPCVAAGQTFAEIYQACHEGFEELC
RLDARFAVFGATLFSEQSQETDRVQLNAKENAALDKRIVSFLHLVGSRLRLMPAIKAIEW
LIRRFRIHEFNTAELITTFLPYHTIPAFVTLLSILPAKIPLEYRFLDPYIRSLTNPPRAA
IVRQATDRPELLSIISQYTLESCRARQEYPGLVSFWGGIMAEAVNGMLDKMRSGRKNIQL
ENDHLLLQQVGPVLSEAMAMKEVPGLQIASYMVVAILAAKGSLNDVALAAFMEQLVHGWT
VDTYRPGLVCLCILAQHRSAKQVSGRVAKALIKVPDLVPALAEIGRQHRVDKLANGLALA
FIDRLSKKGDLRSLPAVNALLQSNLLQEKQIKVIYKALLLAAHKVDDAVDEDGRIRKEIG
SSLVALSQATGDTGDAIRAAIAEVDFDIEELELRLGAAIRPKLAIEQEDEDTETRTQPAA
VEQRRDMEAIFETIAKLNPSSTSCLSQDSRPLFDDLCSVFLSAAATQDDLQKFDATPVLS
RSKAPDNSFYFSFYLRVWCGPYPTLAKVAALERVKLRLKENDCADKDFQALLPYCVVALS
DPAKKVRRAAADLVAVLGSLLRKASAPSRQRWAAKDLYGKAGASSALDNSALKSLVSSIL
VPCLEESVLHEGHVIAALVSALQGSKGSSATESEKRHLSHSARLAILQFLCGHVTETPLL
VVKLRLLKVVNEIRSISGTSRTDLLLPFLRWWAGLGQEEAAEKAAAESLEEAAIDETAVD
VVVANHKDGLDALFQLINDPAVAARAHLVKAIFARIIKIWPSMKSDTKLTTARTMFALTQ
TPSSSGQNVVIEEAAELLRKVDLTTEVLFDFLDSLQEDVRLATEKPANKRRRVSTTEQNR
AAAIQGNSPELKAALGKTTFVLELVQESDPVNHPELLPSLFTTLSDLHHLSTLIGSELGY
LQSLVLSSLLAMMAAYKDNKDLKIDASVGHGDVLATCIQKSSSPSVINSALLLVASLART
APDVVLQSVMPIFTFMGSSVLKQGDDYSAHVVNQTIKEVIPPLIDTFRKRGRNVVSSSKD
LLASFVTAYEHVPSHRKHDVFLSLVQNLGPEDFLFAVLAMFVDRYAATDNMIAFTTRLMS
SFSVEIQLQTLVKLVNLIGDIFKPKPALSSVLLGGEGPGDEDSQKLATKQLNLLPALLAN
RRLKREITQLAERDDMETGKLRELYATLLEGILSLASTVKGKKALYNRCGDALSNLLNLL
SIAEFIKSVEALLDRPNIGLRQKVLRALELRVDSESTGDAESREALLAFLPQLTAVIRES
DDMNYKHTAVTCVDKISEKYGKKDLDAVAAAAATIAGDHCLGQSSQSLRVMALLCLASLV
DVLQDGIVPVLPIAIPKALGYLEESLAGEEPDAELHNASYALMAALAQHIPYMITGSYLD
RLLTLSNASAAAELDDESNSNRTHCLQFLAKLADPKILYNALNQNWASAANHGASAVGEY
LDILGLALDKHSKSVVSKNVSSLSAIFLNALDLRRSVAAGQIKTAISQSQLDELEPKVHE
DALKMIYKLNDATFRPVFSKLMEWATAGLPKSDAAGRTLRLYAVYGFLDAFFGNLKSIVT
SYASYIVESATKVLSSVDFAADGNQKELWKRVLRTLAKCFEHDQDNFWQAPAHFGAVAPV
LVAQFLRAGSVEATEELVPAVVELAAAADSQEHHKELNSTLLKHLRNGQAAVRLAVIKCQ
QALASRLGEEWLQALPEMLPYISELQDDDDEVVERENRRWIVGIEEKLGESLDSMLQ
NT seq 5394 nt   +upstreamnt  +downstreamnt
atggcgacttcgctggctgcgcagctggcgcagattgccgccaactcgcgcaccagcttg
aacgtcaaggccctcaaggccagccactccaagtccctgatttgggagccctgcgtggcc
gccggccagaccttcgccgagatctaccaagcatgccacgagggcttcgaggagctctgc
cgtctggatgcgcgctttgcggtctttggcgccactctctttagcgagcagagccaggaa
accgaccgcgtccaattgaatgccaaagaaaacgcggccctcgacaagcgcattgtatcc
ttcctccacctggtcggcagtcggctgcggctcatgcccgccattaaggccatcgagtgg
cttatccgcaggttcaggatacacgagtttaacaccgccgagctcatcacaaccttcctg
ccgtaccacaccatcccggccttcgtcacccttctctccatcctcccggccaagattcct
ctcgagtacaggttcctggacccctacatccggtccttgacaaaccctcccagggccgcc
atcgtgcggcaggccaccgaccggccagagctgctttcgatcatctcgcagtacactctc
gagtcgtgccgcgccaggcaggagtacccgggcctggtgtcgttttggggcggcatcatg
gctgaggcggtcaatggcatgctcgacaagatgcggtcgggccggaagaacattcagctg
gagaacgaccatctgctccttcagcaggtcgggcccgtgttgagcgaggccatggccatg
aaggaggttcccggtctccaaattgccagctacatggtggtggcgattctcgccgccaag
ggcagcctgaacgacgttgccctcgccgccttcatggagcagctggtgcacggctggacc
gtcgacacctatcgcccgggtctcgtttgcctctgcatccttgcccagcatcgatccgcg
aagcaggtttctggccgcgtcgcaaaggccctcatcaaggttccggatctcgtcccagcc
ctggccgagatcggccggcaacacagggtggacaagcttgcgaacgggctggcccttgct
ttcatcgacaggctctccaagaagggcgacctccgcagcttgccggctgtcaacgcgctt
ctccagtccaacttgctgcaggagaagcagatcaaggttatctacaaggccttgctgctg
gcggcccacaaggtcgatgacgccgtcgacgaagatggacgcatccgcaaagagataggc
tcgtcgcttgttgccttgtcgcaagccacgggggacacgggcgatgccatcagggccgca
atcgcggaggttgatttcgacattgaagagctcgagcttcggcttggggcggcgatccgt
ccaaagctcgccatcgagcaggaggacgaggacacagagacaaggacacagccggcggcg
gttgagcagcggcgcgacatggaagcgattttcgagaccatcgcgaaactgaatccgtca
tccacgtcctgcctgtcgcaggattcccggcccttgttcgacgacctctgctcggttttc
ctctcggcggccgccacccaggatgatctgcaaaagttcgacgccacgccggttctgagc
cggtccaaggctccggacaactccttttatttcagcttctacctacgcgtttggtgcggg
ccgtatccgacgctcgccaaggtggctgccctcgagcgcgtgaagcttcggctcaaggag
aacgactgcgcagacaaggatttccaggccctgcttccctactgcgtggtggcactaagc
gatcccgcgaagaaagtgcgccgggccgccgccgacctcgttgccgtgctgggatctctg
ctcaggaaggcttcggcgccgtctcggcaacgctgggctgccaaggacctgtacggaaag
gccggggcatcgagcgcgctcgacaacagcgctctgaaatccctggttagctcgatcctg
gtcccgtgcctcgaagagtctgtcctccacgagggccatgtcattgcggccctggtcagc
gcgctgcagggctcgaagggctcctctgccaccgagagcgagaagcgccacctttcgcac
tccgcgaggctcgccatcttacagttcctttgcggccatgtcacagaaaccccactgctc
gtcgtcaagctccgcttgctcaaggtcgtcaacgagatccgaagcatctcggggacttcg
cggaccgatctgctcctccccttcctccgatggtgggctgggttgggccaggaggaagcg
gccgagaaggcggcagcggaatccctggaggaggccgccattgacgaaacggctgtcgat
gtggtcgttgcgaaccacaaggatggtctcgacgccttgttccagctcattaacgacccg
gccgtcgctgctcgggcccatctggtcaaggcaatcttcgctcgcatcatcaagatttgg
ccgtccatgaagtcggacaccaagcttacgaccgctcgcaccatgtttgctctcacccag
accccgtcctcgtcgggacagaacgtcgtcatcgaggaggccgcagagctcttgcgaaag
gtggacttgacgaccgaggttctgttcgatttcctcgactctctccaggaagatgtcagg
ctcgccacggaaaagcccgccaacaagcgcaggcgcgtcagcacgacggagcagaaccgc
gccgcggccatccaaggcaacagccccgagctcaaggcggccctgggcaagacgacgttt
gtgttggagctcgtccaggaatccgaccccgtgaaccaccccgagctcctgccgagtctc
tttaccacgctctcggacctccaccatctcagcacgctcatcgggtccgagcttggctac
ctccagagcctcgtgctcagcagcctgctcgccatgatggcggcgtacaaggacaacaag
gacctcaagatcgacgcgtcggttgggcacggagacgtcttggcaacgtgcatccaaaag
tcctccagcccctccgtcatcaactcggcgttgcttctggtggccagcctggctcggaca
gcgccggatgtggtgctgcagagcgtcatgcccatcttcaccttcatgggcagctcggtg
ctcaagcagggcgatgactactcggctcatgtcgtcaaccagacgatcaaggaggtcatc
ccgccgctcatcgacacgttccgcaagcggggacggaacgtggtgtcgagctccaaggac
ctcctcgcgagcttcgttacggcctacgagcacgtgccttcgcaccggaagcacgatgtc
ttcctctccctggtgcagaacctcgggcccgaggacttcctgttcgcggtcctggccatg
tttgtcgatcggtacgcggccaccgacaacatgatcgccttcacgacgcgcctgatgagc
tcgttctcggtggagattcagctccagaccctcgtcaagctcgtgaacctgatcggcgac
atcttcaagcccaagcccgcgctgtctagcgtcctgctcggcggagagggccctggggac
gaggacagccaaaagctggccaccaagcagctgaatctgctcccggcgctcctcgccaac
cgtcgcctgaagcgcgaaatcacgcagctggcggagagggacgacatggagacgggcaag
cttcgcgagctgtatgccacgctcctcgagggcatcctgtccttggcctccaccgtcaag
gggaagaaggcgctctacaatcgctgcggcgacgcgctctccaaccttctcaacctgctt
tcgatcgccgagttcatcaagagcgtcgaggcgctgttggatcgtcccaacattggcctg
cggcagaaggtgctgcgcgcgctcgagctgcgcgtggacagcgagagcaccggcgacgcc
gagtcccgcgaggcgctgctcgctttcctgccgcagctgaccgccgtcatccgcgagtcg
gacgacatgaactacaagcacacggcggtgacgtgcgtcgacaagatctcggagaagtac
ggcaagaaggacctcgacgccgttgcggcggcggccgccacgatcgcaggcgaccactgc
ctcgggcagtcgtcgcagagcctccgggtcatggccctgctctgcctggcgtcgctcgtg
gacgtcctgcaggatggcatcgttccggtgcttcccatcgccatccccaaggccctcggc
tacctggaggagagcttggctggcgaagagcccgatgccgagctgcacaacgcttcgtac
gctctcatggcggcgctggcccagcacattccgtacatgatcacgggctcctacctcgac
cgcctgctcaccctatccaatgcctcggcggctgctgagctggatgacgagtccaacagc
aaccggacgcactgcctccagttcctggccaagctggccgatccgaagattctgtacaac
gccctcaaccagaactgggcctccgccgcgaaccacggcgcatcggccgttggtgagtat
ctggacattctcggcctggcccttgacaagcactccaagtcggtcgtgtccaagaacgtg
tcgtcgctttcggcgatcttcctcaatgctctggaccttcggaggtcggtcgccgcgggc
cagattaagacggccatcagccagtcgcagctcgacgagctggagcccaaggtccacgaa
gacgcgctcaagatgatctacaagctgaacgacgcgaccttccggcccgtcttctccaag
ctcatggagtgggccaccgccggcctccccaagagcgacgccgcgggccggacgctccgc
ctgtacgccgtctacggtttcctcgacgccttcttcggcaacctcaagtccatcgtcacc
agctacgcctcgtacattgtcgagagcgcgaccaaggtgctctcgtcggtcgactttgcc
gcggacggcaaccagaaggagctgtggaagcgggtgctgcggaccctcgccaagtgcttc
gagcacgaccaagacaacttctggcaggcgcccgcgcactttggcgccgtggcgcccgtg
ctcgtggcgcagttcctccgcgccggcagcgtggaggccaccgaggagctggtgcctgcg
gtggtggagctcgcggccgcggcggattcgcaggagcaccacaaggagctcaacagcacg
ctgctcaagcatctgcgcaacgggcaggcggcggtgcggctggcggtgatcaagtgccag
caggcgctggcgagccggctgggagaggagtggctgcaggcgctgcccgagatgctgccg
tacattagcgagctgcaggatgacgacgacgaggtggtggagagggagaacaggaggtgg
atcgtcgggatcgaggagaagttgggagagagtttggactcgatgctgcagtag

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