Rufibacter tibetensis: DC20_00260
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Entry
DC20_00260 CDS
T04099
Name
(GenBank) hypothetical protein
Organism
rti
Rufibacter tibetensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_3_5
Por_Secre_tail
Glyco_hydro2_C5
Motif
Other DBs
NCBI-ProteinID:
ALI97708
UniProt:
A0A0P0C3T5
LinkDB
All DBs
Position
56084..61195
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AA seq
1703 aa
AA seq
DB search
MDVQLLPPSRIQVRRYGFLLILFFSLFLSGEAFAQNDAYTAAGLPKPTVKSDKDDYVPGE
VAIITGTGWTKDQQVDVHFEETPAYHTEHQHDYHGVTVDANGNWTIKYPIEVRHLGVAFE
VHAVGKSTGYEALAYFTDGAVTITASTGGGAISADKANGAWTELGNIVMAESKFGDISYT
SGSGTIVLEAPEGFMFDNTSGGPAPEVILSGSSIAGDNINMIAHNGSIAITVGTGGKTLT
ITILHKSKSSPKNNNTNGSNNPNTLIWQNLRVRPTAGTPLATGNIKYIGTATFETFQNGA
TTSTPNYGTLTMIPGAAAKLAFVQQPTNANAGATISPVTVQVQDKFGNFVSTTRSISLSI
NNSGTLAGTTTVTSNSNGLANFNDFRVTTAGKYRLTAGSAEPTPGLTSPPSSEFTINSVN
ANTATALASSVNPSVYAQNVTFTATVSTEPTGGTPTGTVTFYNGATAISNAIALTSGVAT
FTTSMLGVNTIGHTIKAIYTPTGNFNASPSDPTVTQVVKKADQAITFAEVTGKTFGDAAF
AIAPSASSGLVVSISTTGGISYDEATGKVSITAAGPASITASQAGDANYNAATAVKHSFT
VAKAGNAITFTNPGEQTYAPGKTVALNASATSGGAVTFAVTAGNATVSGSTLTLTGAGSV
TVKASSATTTNYLAAADESVTFSVKKADQTITFAEVTGKTFGDAAFAIAPSASSGLVVSI
STTGGISYDEATGKVSITAAGPASITASQAGDANYNAATAVKHSFTVAKAGNAITFTNPG
EQTYAPGKTVALNASATSGGAVTFAVTAGNATVSGSTLTLTGAGSVTVKASSATTTNYLA
AADESVTFSVKKADQTITFAEVTGKTFGDAAFAIAPSASSGLVVSISTTGGISYDEATGK
VSITAAGPASITASQAGDANYNAATAVKHSFTVAKAGNAITFTNPGEQTYAPGKTVALNA
SATSGGAVTFAVTAGNATVSGSTLTLTGAGSVTVKASSATTTNYLAAADESVTFSVKKAD
QTITFAEVTGKTFGDAAFAIAPSASSGLVVSISTTGGISYDEATGKVSITAAGPASITAS
QAGDANYNAATAVKHSFTVAKAATTTLVTVSNTTYNGSPQGGTAKVTGAGGLDQALTVTY
SGTDLTNYPASVTAPTDPGTYSATASYAATANYQASVDTKPYTISKATTTTNLIISAGTV
RFMDKLTMTAQITPLNTANALTGSVEFKIGTVSYGTVAVVPVPGATDGTVQATLIKQVSE
LPGNYTVNATFSSTNSNYAGSVDSKSLVVRERPANPMSATAGFYTGDVFAWTTSSTSSKA
TMTLIASLKDNEVPNGDLRAAKVTFYYVNGTTYTPIPSAKDIPVGLLDVNDGSVGYATAT
VQFDIGSNNAQDYLVAVGVSGAYTNNHKSPDAQTIITVSKPVPGGFIVGGSQITNAKSNG
QIKGHTGMNTDYQFDISYTKTGSNPKGKAKVMVRSFYKADGTLDNKLHTYVISTNAISTL
SITKSTSEVSATGIFTAKANLDEHFDDGRLPVAIEGGSTFQMEAYQKGCTMEVAITLFRK
AGGIWFSSNWNGSKTERQAVATKSVVYVEGGGNCTSSTQTISKTTAVVAIPANGEAKAEA
KLASYPNPLIDETTVEFSVAQNEEYSLDVYDMKGALVKHLQKGKAANDETITAKWDARTS
NVGVYIIRLSTNNKVKTLRVVRQ
NT seq
5112 nt
NT seq
+upstream
nt +downstream
nt
atggatgtacaattactgccaccctcaaggattcaagtcaggcgctacggcttcctgctg
atccttttctttagcctcttcctctcaggtgaagcatttgcccaaaatgatgcctacaca
gctgcggggctgcccaaacctacagtgaagtcagacaaggatgattatgtacctggtgaa
gtggcaatcataaccggtacaggttggacgaaagaccagcaggtagatgtgcactttgag
gaaaccccagcttatcatactgaacaccaacacgattaccatggtgtaactgttgatgct
aatggtaattggacaatcaaatatcccattgaagtaaggcacttaggagtagcctttgaa
gtccatgcagttggaaaatcaactggctatgaggctttagcttacttcacagatggtgca
gtaactatcaccgcttcaactggaggaggtgccatttctgctgataaagctaatggtgca
tggacggaattaggaaatattgtgatggctgaatctaaatttggagatattagctacaca
tcaggttccgggacaattgtgttagaagcaccagaaggttttatgtttgataatacatca
ggtggacctgctccagaagtaatattatcaggtagctcaatagcaggagataatattaat
atgattgcccataatggtagcatagcaataaccgtaggtacaggtggaaaaacacttacc
ataactattctacataagagtaagtctagtcctaagaataataatacaaatggttcaaat
aaccccaacactttaatatggcaaaatttaagagttaggccaacagcaggaacaccatta
gccactggtaatatcaaatatataggtacagcgacatttgaaacatttcaaaatggagca
acaacctctacaccaaattatggtacgcttactatgattcctggtgctgctgcgaaattg
gcttttgtacagcaaccaacaaatgctaatgcgggtgctactatttcgcctgtaacagtg
caagttcaggataaatttggaaattttgtttctacaaccagatcaatttcgctaagcata
aataattctggaaccctagctggtacaactacagttacttcaaactctaacggcttagct
aatttcaatgatttccgtgtaactactgccgggaaatatcgcttgacggctggctcagca
gagccaacccctgggctaacttctcccccaagcagtgagtttactatcaatagtgtaaat
gctaatactgcaactgctttagcttcttcggttaatccttctgtatacgcgcaaaacgta
acctttaccgctactgttagcacggaaccaacaggtgggacacctacaggtactgttacg
ttctataatggagctacagctattagtaatgcaattgccttaacatcaggagtagctacg
tttaccacgtctatgcttggagtaaatacaatcggtcatactataaaagctatttacact
ccaactggaaactttaatgcttcaccatctgatcccaccgtaactcaggtggtgaagaag
gccgaccaggccatcaccttcgcggaagtcactggcaagaccttcggtgatgctgctttt
gccatcgccccgagcgcctcttctggcctggtggttagcatctccacgacaggcggtatc
agctacgatgaggccactggaaaggtgagcatcaccgcggccggcccggccagcatcacg
gcctcccaggccggtgacgccaactacaacgccgctactgcggtcaagcacagcttcacg
gtagccaaagcagggaacgcaatcaccttcaccaacccaggtgagcagacctacgcccct
ggcaaaacagtggccctgaatgcctcggccacttctggcggtgcggtaacgtttgcagtg
actgcaggcaacgccactgtaagcggttccaccttgaccttgaccggtgctggttctgta
accgtgaaagcctcctcggccaccacaactaattacctggcggccgctgatgagagcgta
accttcagtgtgaagaaagccgaccagaccatcaccttcgcggaagtcactggcaagacc
ttcggtgatgctgcttttgccatcgccccgagcgcctcttctggcctggtggttagcatc
tccacgacaggcggtatcagctacgatgaggccactggaaaggtgagcatcaccgcggcc
ggcccggccagcatcacggcctcccaggccggtgacgccaactacaacgccgctactgcg
gtcaagcacagcttcacggtagccaaagcagggaacgcaatcaccttcaccaacccaggt
gagcagacctacgcccctggcaaaacagtggccctgaatgcctcggccacttctggcggt
gcggtaacgtttgcagtgactgcaggcaacgccactgtaagcggttccaccttgaccttg
accggtgctggttctgtaaccgtgaaagcctcctcggccaccacaactaattacctggcg
gccgctgatgagagcgtaaccttcagtgtgaagaaagccgaccagaccatcaccttcgcg
gaagtcactggcaagaccttcggtgatgctgcttttgccatcgccccgagcgcctcttct
ggcctggtggttagcatctccacgacaggcggtatcagctacgatgaggccactggaaag
gtgagcatcaccgcggccggcccggccagcatcacggcctcccaggccggtgacgccaac
tacaacgccgctactgcggtcaagcacagcttcacggtagccaaagcagggaacgcaatc
accttcaccaacccaggtgagcagacctacgcccctggcaaaacagtggccctgaatgcc
tcggccacttctggcggtgcggtaacgtttgcagtgactgcaggcaacgccactgtaagc
ggttccaccttgaccttgaccggtgctggttctgtaaccgtgaaagcctcctcggccacc
acaactaattacctggcggccgctgatgagagcgtaaccttcagtgtgaagaaagccgac
cagaccatcaccttcgcggaagtcactggcaagaccttcggtgatgctgcttttgccatc
gccccgagcgcctcttctggcctggtggttagcatctccacgacaggcggtatcagctac
gatgaggccactggaaaggtgagcatcaccgcggccggcccggccagcatcacggcctcc
caggccggtgacgccaactacaacgccgctactgcggtcaagcacagcttcacggtagcc
aaagcagccactacaaccctagtgactgtaagtaatactacttacaatggttcacctcag
ggcggtacagctaaagtaactggtgctggtggtttagatcaagcactgactgttacctat
tcaggtactgacttaactaattatccagcttctgttactgctcctaccgatccaggtact
tacagtgcaacggcttcatatgctgcaacggctaactatcaagcttctgttgataccaag
ccctacaccattagtaaagctactaccactacaaatctgatcataagtgctggaactgtt
aggtttatggataagttaaccatgacagctcaaatcacacctttgaatactgctaatgcc
ttaactggttcggttgaattcaaaattggtactgtgagctatggtacagtagccgtagtt
cctgttcctggagctacagatggaacagtgcaagcgactcttataaagcaagtttctgaa
ctaccaggtaactatactgtgaatgctactttctcaagcacgaacagcaattatgcagga
agtgttgatagcaagagcctcgttgtgcgcgaaagacctgctaatccaatgagcgctact
gccggcttctataccggagacgtgtttgcctggacaacaagcagtacttctagcaaagct
actatgaccttgatagcctcgcttaaagacaatgaagttcctaacggtgatttgagagct
gcaaaggttactttctactatgtaaatggaactacatatacgccaattcctagtgcgaaa
gacataccagtaggtttattagatgtgaatgatggttcggtaggatatgcaactgcaact
gttcagtttgatataggttcaaacaacgctcaggattacttagtagccgtgggtgtgtct
ggtgcatacacaaataatcacaaaagtccagatgctcaaactatcattacagtgtctaaa
cctgtaccgggtggattcattgtgggaggtagccagattacgaatgccaaatctaatggg
cagatcaaaggacatacaggaatgaatactgattaccagtttgatatttcatataccaag
accggttctaatccaaaagggaaagcgaaagttatggtacgaagcttttataaagctgat
ggaaccttagataacaagcttcatacttatgtgatctctactaatgccatatccacttta
agtataactaaatccacatccgaagtttcagcaaccggtatttttacagccaaagcaaac
ttagatgagcactttgatgatggcagattaccagtggccatagaaggtggatctactttt
caaatggaagcttaccaaaaaggttgtactatggaagtagcgataaccttattcagaaaa
gctggcggtatttggttttccagtaactggaacggaagtaaaactgaaagacaagcagtg
gccacaaaaagtgtagtgtatgttgaaggtggaggaaattgcacctcatctactcagact
atcagcaaaactacagctgtagttgcaattccagcaaatggagaagcaaaagcagaagct
aaacttgcctcataccctaacccactcattgacgagactactgttgaattcagcgttgct
cagaatgaagagtacagcttagatgtgtatgacatgaaaggcgctttggtgaaacacctg
caaaaagggaaagcagcgaatgatgagacaatcactgcgaaatgggatgccagaacctct
aacgtaggagtatacatcatcaggttgtcaaccaacaacaaggtgaaaaccctgcgggta
gtaagacaataa
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