Rufibacter tibetensis: DC20_01115
Help
Entry
DC20_01115 CDS
T04099
Name
(GenBank) biopolymer transporter Tol
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
rti
Rufibacter tibetensis
Pathway
rti00040
Pentose and glucuronate interconversions
rti01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DC20_01115
Enzymes [BR:
rti01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
DC20_01115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PD40
Pectate_lyase22
DUF1513
Motif
Other DBs
NCBI-ProteinID:
ALJ01104
UniProt:
A0A0P0D034
LinkDB
All DBs
Position
complement(294519..295832)
Genome browser
AA seq
437 aa
AA seq
DB search
MHAPAKLSVSFLLAALCTTGLSVSSHAQTIGGVDYSDRAHVDKTFDMAGTDIFGQRFPSE
SATIVDPVTGVKITALTTSRHSSSKIYQDHPNWTADGKYIVFTSNRNTAAGGNVTFADKN
APPRKERQYYALSMDTHEIVQVTTGTGAGDMLLGHHRNIAYRIKDNQVIEVNLEQLLKDS
EAGKVKAPANYEKLVATIPSDLKPGGTCLDINDKRIFFSTRVGADGSAIHSIDLDTKKTT
KLVEVPFRTGHFQANPYVSGEMMYCWETGGDSPQRMWVLSVDKNGKVNNRAVYKEKADEW
VTHEVFAGPDHILFNVMGHLDRLRKNPTGIVLHNIRTNESKMLGQAKELGGYWHAAGTKD
LKWAIGDSFDGNIYRLNIDKGDATLLTTGHRPNTKSPFSPQAHAHQSISPDGKWVLFNSS
MLTDSDIMMVPMHPQGL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
ctgcatgcaccggcaaaactaagtgtaagttttctgttggcagctctgtgtaccacaggg
ctctctgtttcttcgcatgcccaaaccattggaggcgtagattattcagacagagcccac
gtggacaaaacctttgatatggcaggcactgatatttttgggcaacgctttccttcagaa
agtgcgaccattgtggaccctgtcaccggcgtgaagatcacagctcttactacttcccgc
cacagcagttccaaaatttaccaggatcaccctaactggacggcagacgggaagtacatt
gtttttacctcaaatcggaatacggcagctggcggcaatgtcacatttgcagacaagaat
gctccgccaagaaaagaaaggcagtactacgctctctccatggatacccacgagattgtt
caggtaactaccggaactggagcaggagatatgcttcttgggcatcatagaaacattgcc
taccgcatcaaagacaatcaggtgatagaggtaaacctggaacaactgctcaaggacagc
gaagctggaaaagtgaaagcacccgccaattatgagaagctggtggccactattcccagt
gacctgaaaccgggcggaacgtgtttggacatcaatgacaaacgaatcttcttctctacc
cgggttggggcagatggttcggccatccacagcattgacctggacaccaaaaaaacaact
aaactggtagaggtgcctttcaggaccggccacttccaagcgaatccctatgtatctggc
gagatgatgtactgctgggaaaccggcggtgattctccgcagcgcatgtgggtactgagt
gttgataagaacggcaaggtgaacaacagggcggtttacaaagaaaaggcagatgagtgg
gtgacgcatgaagtgtttgccggacccgatcacattcttttcaacgtgatgggtcatctt
gacaggttaagaaagaatcctactggtattgtgctgcacaacatccgcaccaatgaatct
aaaatgctggggcaagccaaagaattaggagggtactggcacgctgcaggaacaaaagac
ctgaaatgggcaattggtgattcttttgacggcaacatctaccggttgaacattgacaag
ggtgacgccaccttactgaccactggtcacaggcccaacaccaaaagcccgttctcaccc
caggcgcatgcgcaccaatccattagccctgatgggaaatgggttctatttaattccagc
atgctcacagacagtgacatcatgatggtgcccatgcatccacaagggctataa
DBGET
integrated database retrieval system
