Rufibacter tibetensis: DC20_01930
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Entry
DC20_01930 CDS
T04099
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rti
Rufibacter tibetensis
Pathway
rti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DC20_01930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rti03400
]
DC20_01930
Enzymes [BR:
rti01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DC20_01930
DNA repair and recombination proteins [BR:
rti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DC20_01930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
Helicase_C
WHD_PriA_bact
ResIII
Zn_ribbon_PriA
PriA_C
HTH_65
nSTAND3
Cas3-like_C_2
AAA_30
YgaB
nSTAND6
Zn_ribbon_6
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ALI97956
UniProt:
A0A0P0CG05
LinkDB
All DBs
Position
512296..514830
Genome browser
AA seq
844 aa
AA seq
DB search
MTPELEFHIPADDVPDRVTLFADVILPLPLPKLYTYRVPYQMSDEVLVGARVLVQFGSKK
VLSCVVARVHEEPPKEYQAKYLLEVIDEKPVVTGPQLRLFLWMAEYYLCTLGEVINAALP
SALKLSSESQIQLHPQFNIETNEWPLTSHEEKIVFALRQKQHLTFTEVGQLLQLTSFHKI
IKSLLLKDIIIIYEEIAEKYAPKVVKKVRLASSFTTDEETLEELFNQLAPKPKQLDVLLK
YVQLTPILQNLRMNEEGLEKNVLTSNPHLSLSAINSLLKKGVMEQFDVVVSRFPMAEGRG
PYLASDLSTAQAAARDQVLETFEEKSTVLLHGITGSGKTEIYIDLINKAVEAGGQVLYLL
PEIALTAQIVTRLKRVFGDRLGVYHSKFSDNERVEVWNGILSGRFQVVVGVRSSVFLPFH
SLSLIIVDEEHEPSYKQHEPAPRYNAREVAFMMAQFQGAKTLLGSATPSIESYYHCKTGK
WGLVNLHERYGEATLPEVELVDTRQESLRKNMLSHFSQRLVHDIEDTLHRQEQVILFQNR
RGYAPFIDCNDCAWIPKCRNCAVSLSYHKFSNELRCHYCGYTERKPNDCPACGSTMLKTV
GFGTEKIEDELKLIMPEARIQRMDLDTTKKKNSHQQIIEDFEQQRTNVLVGTQMVTKGLD
FEHVSLVGILSADSIIHFPDFRAHERAYQLFVQVSGRAGRKGNKGKVLIQTANPNQPIFQ
RVIQNDYMGLYEQEIAERQKFRYPPFVRMIRLTVKHPEARPCEGAAILLAKELVDRLGRT
GVLGPEAPHIFKIRNQFLQEIHVKLDREGGNLRESKAQVLEAVQALLKNKDLKQVRVVID
VDPS
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
ttgacaccagaattagaatttcatattcctgctgatgacgtccctgaccgggttaccctg
tttgcggacgtcattttacctttacccttacccaagctttacacgtaccgggtaccctac
cagatgagcgatgaagtgctggtaggtgcgcgcgtgttggtacagtttggctccaagaaa
gtattgagctgcgtggtggcgcgcgtgcacgaagagccgcccaaagaataccaggccaag
tacctgctggaggtcattgatgaaaagcccgtggttaccggtccgcagctccggcttttc
ctctggatggccgagtattatctctgcaccctgggcgaggtcatcaacgccgcccttccc
tctgccctgaaacttagcagcgaatcccagattcagctgcaccctcagttcaatattgaa
accaatgaatggccccttaccagccacgaggaaaaaattgtctttgcgctgcgccagaaa
cagcacctcacctttactgaggtaggccaactgctgcaactcaccagcttccataaaatc
attaaatcgctcctgctcaaagatatcatcatcatctatgaggaaatagccgagaagtat
gcccctaaagtggtaaagaaggtacgtcttgcttcttcctttactaccgatgaggaaacc
ctggaagagcttttcaaccaattagcaccaaagccaaaacagttggacgttttgctcaag
tatgtgcaactcacgcctattctgcaaaacctcagaatgaacgaggaaggactagagaaa
aatgtgcttacctccaacccgcacctgtccttgtcggccatcaattcgttgttgaagaaa
ggcgtaatggagcaatttgatgtggtggtgagccgcttccccatggccgagggccggggc
ccttacctggcgtctgatctttccacagcgcaagctgcggcgcgtgaccaggttctggaa
acctttgaagagaaaagcacagtacttctgcacggcatcacaggtagtggcaaaaccgag
atttacattgacctgatcaacaaagccgtagaggcaggcggtcaggtgctgtacctcctc
ccagagattgcccttaccgctcagattgtaacccgcctgaaacgtgtgttcggggaccgc
ttgggtgtgtaccactcaaagttttcagacaatgaacgcgtggaagtctggaacggaatc
ttgtccggccgcttccaggtggtggtgggcgtacgttcctcggtgtttttgccgttccat
tcgctttcgctcatcattgtggatgaagagcacgagccttcttacaaacagcatgaaccg
gcaccgcgctacaatgcccgggaagtggccttcatgatggcgcagttccagggagccaag
acgctcctgggctcagctactccttccatagagtcttattatcactgcaaaaccggcaaa
tggggcttggtgaacctgcacgaacggtatggcgaggctaccttgcccgaggtagaacta
gtggacacccggcaggaaagcctccggaagaacatgctcagccatttctcccagcggctg
gtgcatgacattgaagataccctccaccgccaggagcaagtcattttgttccagaaccgc
cgtggctacgctcctttcattgattgcaatgactgcgcttggattcctaagtgccgcaat
tgcgccgtaagtttgtcttaccacaagttctccaatgaactgcggtgtcattactgcggc
tacaccgaacgcaaacccaatgactgccctgcctgtggttccaccatgttgaaaacggta
ggtttcgggaccgagaagattgaggacgaactgaagctgattatgcctgaggcccgcatc
cagcgcatggatttagacactactaagaagaagaacagccaccagcagattatagaggat
tttgagcagcaacgcaccaatgttctggtaggtacccaaatggtgactaaaggcctggac
ttcgagcacgtgagtttagttggtatcctgagcgccgacagcatcatccacttcccggat
ttcagagcccatgaacgtgcttaccagttatttgtgcaggtaagtggcagggccggccga
aaggggaacaaggggaaagtgctaatccagacggccaaccctaaccagcctatcttccag
cgggtcatccaaaacgactacatgggactgtatgagcaggaaattgccgagcgccagaag
ttccgttatccacccttcgtgcggatgatacgcttgacggtaaagcatccggaggcgagg
ccatgtgaaggtgcagctatcttactggcgaaagagttggtagaccggttaggtaggact
ggcgtgctggggcccgaagcaccccatatctttaaaatcagaaaccagtttctacaggaa
attcacgtgaaactagaccgcgaaggtggaaaccttcgtgaatcaaaagcgcaggtgctt
gaagcagtacaagcattacttaaaaacaaagatctcaagcaagtacgggtggtcattgac
gtagatccttcatag
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