KEGG   Rufibacter tibetensis: DC20_06080
Entry
DC20_06080        CDS       T04099                                 
Name
(GenBank) hypothetical protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
rti  Rufibacter tibetensis
Pathway
rti03030  DNA replication
rti03430  Mismatch repair
rti03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DC20_06080
   03430 Mismatch repair
    DC20_06080
   03440 Homologous recombination
    DC20_06080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rti03032]
    DC20_06080
   03400 DNA repair and recombination proteins [BR:rti03400]
    DC20_06080
Enzymes [BR:rti01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DC20_06080
DNA replication proteins [BR:rti03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DC20_06080
DNA repair and recombination proteins [BR:rti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DC20_06080
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 Avidin DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: ALI98615
UniProt: A0A0P0C1V3
LinkDB
Position
1574281..1574931
AA seq 216 aa
MSDAPFLPLFPQLTPILSNATALDFETTGVSGSKGRVIEIGAVKSAHGKVVGRFHTLVKL
KGELPKKITEITGITHEDLVNAMEERTAFSILKEFIGDSTVVAHNAPFDLGFLYSTYRRL
KLGPVQHPFLDTLSVCRLRQPSPRNLPDMCKAYGIPLTRWHRALPDATATWHLLHRLHEE
SPLDGMRNKLVLNPKYPAPFWLPPLAEVLSPPASLR
NT seq 651 nt   +upstreamnt  +downstreamnt
atgtctgacgcgccttttctaccgcttttcccgcaactcacccccatcctcagcaatgca
accgccctggattttgaaaccaccggggtaagcggaagcaaaggacgggtgattgaaata
ggagctgttaagagtgcgcacggcaaagttgtcggccggtttcacaccttggtaaaactg
aaaggggaactacccaaaaagataactgagatcaccggcatcacgcatgaggacctggta
aatgccatggaagagcgtactgccttctctattctgaaggagtttataggcgatagcacc
gtagtagcccacaacgctccttttgaccttggctttctgtacagcacctaccgcagacta
aagctgggaccggtgcagcatccgttcctggataccctgtcggtgtgccgcttgcgccag
ccgtcgccgcgtaatttgccagacatgtgcaaagcctatggcattccgcttacccgatgg
caccgtgccctgccagacgccaccgctacctggcacctgctccaccgcctccatgaagaa
agccccttagatggcatgcgcaacaagcttgttctaaatcccaagtacccggccccgttc
tggctgcctccgctagccgaggtcctttctccgcccgcttcccttcgatag

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