Rufibacter tibetensis: DC20_06180
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Entry
DC20_06180 CDS
T04099
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rti03009
]
DC20_06180
Enzymes [BR:
rti01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DC20_06180
Ribosome biogenesis [BR:
rti03009
]
Prokaryotic type
ribosomal protein modification factors
DC20_06180
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ALI98630
UniProt:
A0A0P0CHC5
LinkDB
All DBs
Position
complement(1601455..1602813)
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AA seq
452 aa
AA seq
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MKVRSLKQDKYNVITLGCSKNLVDSEVLMGQLKANDRQVVHDSEKDDANIIIVNTCGFID
NAKQESIDTILRYADAKEAGAIDKLYVTGCLSQRYKDSLEAEIPQVDAYFGTLELPQLLK
TLEADYKHELIGERLITTPKHYAYFKIAEGCNRPCSFCAIPLMRGKHVDRPIDSLVKEAT
RLANMGTKELILIAQDLTYYGLQHYGERKLAELLQRLSDVNGIEWIRMQYAYPSQFPMDA
LDVMVERENICKYLDMPLQHISDNMLKTMRRGISKRRTLELVDTIRQRVPNIALRTTLIA
GHPGETQQDFEEMYCWVEETRFDRLGIFTYSHEENTHSHTLEDNVPDEVKQERADAIMEL
QQGISMEMNEEKVGNTYKVLFDRKESGYFVGRTQYDSPEVDNEVLVPADSTYVRLGDFAN
VKITDSSDFDLYGEVVTNNYAPAEKESSSLHL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagtaagatcccttaaacaagacaaatacaacgttatcacactgggttgctccaaa
aacctggtagactctgaggtgctcatgggccaattgaaagccaatgatcgccaggtggtg
cacgactcagagaaagacgacgctaacattattattgtgaatacctgcggcttcattgac
aatgccaagcaggaatccattgataccattctgcgctacgccgatgccaaagaagcgggc
gctattgataaactttacgtaaccggttgcctttctcagcgctacaaagactctttggag
gcggagatcccgcaggtagatgcctacttcggaaccctggagttgcctcagttgctgaaa
accctggaggctgattacaagcacgaactcattggcgagcgtctgatcaccacgccaaag
cattacgcttacttcaagattgctgagggctgtaaccgtccttgttcattttgcgctatt
cctttaatgcgtggcaagcacgtagatcgtcctatagacagtttggtgaaggaagccacc
cgtctggccaatatgggcaccaaagaacttattttaattgcccaagacttgacgtattac
ggtttgcagcactacggtgagcgcaaactagccgagctgttacagcgtctctcagacgtg
aatggcattgagtggatcagaatgcagtacgcctacccaagccagttcccgatggatgcc
ctggacgtgatggtagagcgcgagaacatctgcaagtacctagacatgccattgcagcac
atctcagacaacatgctcaaaaccatgcgccgcggtatctccaagcgccgtacgctggag
ctggtggacaccatccgtcagcgcgtaccgaacatcgctttacgcactaccttaattgct
ggtcaccctggtgaaacacagcaggactttgaggaaatgtactgctgggtggaggaaacc
cgttttgaccgtttgggcatcttcacgtactcacacgaagaaaacacacactcgcacact
ttggaagacaatgtgccggatgaggtgaagcaagagcgtgccgatgccattatggagctg
cagcaaggtatttccatggagatgaacgaagagaaagtaggcaacacctataaagtattg
ttcgaccgtaaagagagtggctactttgtgggacgtactcagtacgattccccggaagta
gacaacgaggttctggtaccagccgatagcacctacgtacgcttaggagacttcgctaac
gtaaaaatcactgattcctcagacttcgacctttacggcgaagtagttaccaacaactac
gctcccgcagagaaagaatcttcctctcttcatttatag
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