Rufibacter tibetensis: DC20_07870
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Entry
DC20_07870 CDS
T04099
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rti03016
]
DC20_07870
Enzymes [BR:
rti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DC20_07870
Transfer RNA biogenesis [BR:
rti03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DC20_07870
Prokaryotic type
DC20_07870
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Apocytochr_F_N
Motif
Other DBs
NCBI-ProteinID:
ALI98910
UniProt:
A0A0P0CR45
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All DBs
Position
complement(1995028..1995837)
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AA seq
269 aa
AA seq
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MRYFLEVAYDGTRFHGWQLQPNALTVQEVLDDCLCKVFRLPQVETVGSGRTDTGVHATQQ
WVHVDLPQAVQPEEIQHKLNRILPADISVGQVLPVGSEAHTRFDAISRTYEYRITLQKNP
FLVRHAYYLSRKPDVANMNEAAQTLLQLEDFTTFSKVKGDTKHYRCTITQAQWREEGEQL
VFTIKANRFLRGMVRLVVGTLLDVGKGKLTVAQFRDLIERQDRRLASGAAPAQGLFLYRV
EYPENYFTQQRVSFEELLAAQIREEESSL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcggtattttttagaagtggcgtatgatggcaccaggttccacgggtggcagctacaa
cccaatgcgctaaccgtgcaggaggtgttagatgattgcctgtgtaaggtgttcaggttg
ccccaggtagaaacagtaggcagcggccgcaccgatacgggcgtacacgctacccagcag
tgggtgcacgtagacttgccacaggcagttcagcccgaagagatccagcacaagctcaat
cgcattttgccggcagatatctccgttgggcaggtgctgccggtaggttcagaggcacac
acccggtttgatgccatcagccgcacttatgagtaccgcatcacgttgcagaagaacccg
tttctggtacggcacgcctactatctttccaggaagcccgacgtggctaacatgaacgag
gctgcgcagacattactgcaactggaggattttaccactttctctaaagtaaaaggcgac
accaaacactaccgctgcactattacccaagcccagtggcgcgaagaaggagagcaactg
gtatttactatcaaagccaatcggtttttgcgtggcatggtgcggttggtggtaggtacg
ctgttagatgtgggcaagggcaaactgacggtggcgcagttcagagacctgattgaacgg
caagaccggcgtctggccagcggggcggctcctgcccaagggttgtttctttatcgcgta
gaatatcctgaaaactattttacgcagcagagggtatcctttgaggaactccttgctgct
cagataagagaagaggagtcttctttatga
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