Rufibacter tibetensis: DC20_08310
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Entry
DC20_08310 CDS
T04099
Name
(GenBank) hypothetical protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rti03009
]
DC20_08310
Enzymes [BR:
rti01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DC20_08310
Ribosome biogenesis [BR:
rti03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DC20_08310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ALJ01315
UniProt:
A0A0P0D313
LinkDB
All DBs
Position
complement(2093552..2095381)
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AA seq
609 aa
AA seq
DB search
MNEDTPQEGNDRPRNNNSWNENKKVFGRGTRFDRPAGGDREGGFRNRDRNADNSDRPSSG
DRGRSERPRREDNREGDINTNRENRERAPRRENERRGGDFRPARGFERPDRGNDRRDERP
RGENDRSDRRPAREGGFNRPEGRDSRGGGSFQDRREGSRGPARGDEERGGERRSFGNRGD
RGGERRGTDRPSFGAGRDDNRPARGGDRREGGFQKPGGFSSDRNGGFNRGSDDRRERSGN
REERGGDRREDRGFNRDDRRSDAPRENRPFSGNRDENRSERPARREGDRPFDRNAPRENR
GRDDRSSSFPKRDGARPERGSTRPDRNDRPARGEGKGFKEGRFGRSEEETQEAPFYNLKR
YEERRKKRDESYGNEDLRLNRYIANAGICSRREADELIAAGEIKVNGQVVTEMGYKVAPT
DTVQYGRKTLSREKTVYVLLNKPKDFLTTTDDPEGRKTVMDLVKNASKERLFPVGRLDRN
TTGLLLFTNDGELAQKLTHPSNKISKIYQVELDKPITQEHVKQIQAGLELEDGKAEVDDV
ALLGESNKFLGIEIHIGRNRIVRRIFEHLGYEVVTLDRVQYAGLTKKDLPRGNWRFLTEK
EVVRLKYFM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
ataaacgaagatacgcctcaagaaggcaacgatcgtccacggaacaataactcctggaac
gaaaacaagaaagtatttggcagaggcacccgctttgaccgccctgctggtggagaccgt
gaaggaggtttccgcaaccgagacagaaacgcagacaattcagatagaccctcttctggt
gaccgcggccgttcagaaagaccgcgccgcgaagataaccgtgagggagacataaatacc
aaccgcgagaacagagaacgcgcgccaagaagagaaaacgaacgcagaggcggcgatttc
cgtccggcgcgtgggtttgaaagaccagacagaggcaacgatcgtcgtgacgagagacct
cgtggtgaaaacgaccgctctgaccgtagaccagccagagaaggtgggttcaaccgtcct
gaaggcagagactcaagagggggtggttctttccaggaccgtcgtgaaggaagcagaggc
ccagcccggggtgatgaagaaagaggcggagagcgtcgttctttcggaaaccgtggagac
cgtggtggcgaacgccgtggtacagaccgcccatcttttggcgcaggcagagatgataac
cgcccagcccgtgggggagaccgccgtgaaggtggttttcagaaaccaggcggcttctcc
tctgatcgcaacggtgggttcaatcgcggcagcgatgaccgcagagaaagaagcgggaat
agagaagagcgtggcggtgaccgccgcgaggacagaggcttcaaccgtgatgacagacgc
agtgatgctccccgtgaaaacaggccgttttccggaaatcgcgatgaaaaccgttctgag
cgcccggcccgcagagaaggtgacagaccctttgaccgcaatgctccacgtgaaaaccga
ggccgtgatgaccgttcctcttctttcccgaaaagggatggggctcgcccagagcgaggc
tctacccgcccagaccgcaatgaccgtccggccagaggagaaggcaaaggctttaaagaa
ggccgttttggtcgctcagaagaagaaacccaggaagcacctttttacaacctgaaacgc
tatgaagagcgccggaagaagagagatgagtcttacggaaacgaagacttacgcttaaac
cgctatatcgccaacgctggtatttgctcacgccgtgaagctgacgaactcatcgccgcg
ggcgagatcaaggtaaacggacaagtagtgacggagatgggctataaagtagcgcctaca
gataccgtacagtacggccgtaaaaccttgagccgcgagaaaacagtgtacgtgctgttg
aacaaaccaaaagacttcctgactaccactgatgacccggaaggccgcaagaccgtgatg
gacctagtgaagaatgcctctaaagagcgtttgttcccggtaggccgtctggacagaaac
accactggtttgcttcttttcaccaatgacggggaactggctcagaaactgacgcacccg
tctaacaaaatatctaagatttatcaggtagaactggataagcctatcacgcaagagcat
gtgaagcagattcaggctggcttggaactggaagatggcaaagctgaagtggatgatgta
gccttgttaggagaaagcaacaagttcttaggcattgagatccacattggccgtaaccgc
attgtgcgtcgcatttttgaacacctggggtatgaagtagtaaccctagaccgtgtgcaa
tatgccggccttaccaaaaaagacttaccaagaggcaactggcgtttcttaacagaaaaa
gaagtagtgcgcctgaaatacttcatgtaa
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