KEGG   Rufibacter tibetensis: DC20_09050
Entry
DC20_09050        CDS       T04099                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rti  Rufibacter tibetensis
Pathway
rti03030  DNA replication
rti03410  Base excision repair
rti03420  Nucleotide excision repair
rti03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rti00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DC20_09050
   03410 Base excision repair
    DC20_09050
   03420 Nucleotide excision repair
    DC20_09050
   03440 Homologous recombination
    DC20_09050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rti03032]
    DC20_09050
   03400 DNA repair and recombination proteins [BR:rti03400]
    DC20_09050
Enzymes [BR:rti01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DC20_09050
DNA replication proteins [BR:rti03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     DC20_09050
DNA repair and recombination proteins [BR:rti03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     DC20_09050
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     DC20_09050
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2 HHH_5 DUF3913
Other DBs
NCBI-ProteinID: ALI99095
UniProt: A0A0P0C2Z6
LinkDB
Position
2262470..2265340
AA seq 956 aa
MSTPDKRLFLLDAMALIYRAHFAFSKNPRINSKGMNTGAALGFTNTLVDLLNREKPTHIG
VCYDAPSKTFRHDSFVEYKANRQAMPEDISIAIPYVKKIVEAFGIPGMMMDGFEADDIIG
TLSCKAEKAGYDVFMMTPDKDYYQLVTDHVFVYKPAFLGNAIEIIDKPKVLERWEIENVK
QVIDILGLQGDAVDNIPGIPGIGEKTAKTLIQRFGSVENLIANAHELKGKQKENVVNFAE
QGLMSKELATIHLDVPIDFDEEGLRYDGPDTEKLAALFDELEFRQLATRVLGTASPAVPK
PVSNKPTVGKGFKSDKPMGQTSLFEMPAGETVAPEEGADATAAGDDYAPRTRKTIDTTLH
EYHLLTTPEQRQQLLKYLKQQKEVSFDTETTSIDAITARLVGISFCYMPGEAYYIPVPPK
DEDAAREIVQEFKEVLESPAITKTGQNIKYDLVVLQRYGIDVQGPLYDTMLAHYLLEPDM
RHNMDLLAETYLHYTPISIETLLGKGKNQLTMDKLPALQIYEYACEDADITLQLKNYFDP
LLEKQGLKRLFNDVENPLLRVLGHMEREGVSIDADALAESSIVLQTSIQEMEQKIFNLAG
MEFNIGSPKQLGEVLFDRMGLGGSKIKKTKTGQYATGEEILSKLAFEHEIVQLILDHRQL
TKLKSTYVDALPALVCNEDNRLHTSYNQAVAATGRLSSTNPNLQNIPIRTEKGREIRKAF
VPRDENHVLLSADYSQIELRIMAHFSNDATMKEAFQKGLDIHASTAAKVFHVPVDQVDSD
MRRKAKTINFGIIYGISAFGLAERLAIPRREAAEIIEAYFQEFPAVKEYMDSAINQARDQ
EFVETLLGRRRYLRDINSRNQNIRGYAERNAINAPIQGTAADIIKIAMINIDQWLREEKL
ASRMILQVHDELVFDVLKEELPVVQPKIEELMKNAFPLSVPMEVGLGTGENWLQAH
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgagtacaccagacaaacgcctgtttctgctagacgccatggcgctcatttaccgcgcc
cacttcgcgttcagcaagaaccccagaatcaactccaaaggcatgaataccggggctgcc
ctgggtttcaccaacaccttggtagacctgcttaaccgcgaaaagcctacccacatagga
gtgtgctacgatgcaccctccaagaccttccgccatgattcctttgtggaatacaaggcc
aaccgtcaggccatgcccgaggatatctctatcgctattccgtacgtgaagaagattgta
gaggcgtttggcatacccggcatgatgatggacgggtttgaggccgatgacattattggc
acgctgtcttgcaaagccgaaaaggccgggtacgatgtcttcatgatgacgcccgacaaa
gactactatcaactggtcaccgaccatgtgtttgtctacaaaccagcgtttctgggcaat
gccattgaaatcattgacaaacccaaagtgctcgagcgctgggagattgagaacgtaaag
caggtcattgacattttgggcttacaaggcgatgccgtggacaacattccgggaatacct
ggtattggggaaaagaccgctaaaacgctgattcaacgcttcggctccgtagagaacctg
attgccaacgcccatgagctcaaaggcaagcagaaagagaacgtagtgaacttcgccgag
cagggcctcatgtccaaagaactagcgaccattcacctggatgtacccattgactttgac
gaggaaggcctgcgctatgatggtccggacacggagaaactggcggccttatttgatgaa
ctagagttccggcagctggctacccgcgtgttaggcactgcctcgccggcggttccgaag
cccgtaagcaacaaaccaactgtgggcaaaggcttcaaatcggataagcccatggggcaa
acatccctatttgagatgccggccggtgaaactgtagctcctgaagaaggggcagatgct
actgctgctggcgatgactacgcaccgcgcacccgcaaaaccatagacaccacgctgcac
gaataccacctgctcactacccctgagcaacggcagcaactgctcaaatacctgaagcaa
cagaaagaggtttcctttgacacggagaccaccagcattgatgccatcaccgcccgtttg
gtagggatttcgttctgctatatgcccggtgaggcttactacattccggttccgcccaaa
gatgaagatgccgcccgtgaaattgtgcaggagttcaaggaagtgctggaaagccccgct
atcaccaaaaccgggcagaacatcaagtatgacctggtagtgctgcagcgctacggcatt
gatgtgcagggaccgctgtatgacaccatgctggcccactacctcttggagccggacatg
cgccacaacatggatctgctagccgagacgtacctgcactacacgcccatttccattgag
acgctgctgggcaaaggcaaaaaccagcttaccatggacaagcttccggcgctgcagatc
tacgagtacgcctgtgaagacgccgacatcacgcttcagcttaaaaactattttgatcct
cttttagagaaacaaggcctgaaacgcctgttcaatgatgtggaaaacccgctcctgcgc
gtgttgggccatatggaacgcgagggtgtaagcattgacgccgatgctctggccgagtca
tccattgtgctgcaaaccagcattcaggaaatggagcagaagatcttcaacctggcgggt
atggaattcaacatcgggtctcccaaacagttgggtgaggtgctgtttgaccgcatgggt
ctgggcggaagcaagatcaagaaaaccaaaacgggtcagtacgcgaccggcgaggagatt
ctgtctaagctggcctttgagcacgaaattgtgcagctcatcctggatcatcggcagttg
accaaactgaagagcacgtacgtagatgcgctgccagctttggtgtgcaatgaggataat
cgtctgcatacgtcgtacaaccaggccgtagccgctaccggtcgtctgagctccaccaat
ccgaacctgcagaacatccctattagaacagagaagggccgcgagatacggaaagcgttt
gtgccgagagacgaaaaccacgtgttgctctccgctgactactcgcagattgagctgagg
atcatggcgcacttcagcaatgacgctaccatgaaagaagctttccaaaaggggttggac
attcacgcttcaaccgcggccaaggtgttccacgtgcccgtagaccaggttgattctgac
atgcgccgcaaggccaagaccatcaactttggcattatctacggtatctccgccttcggt
ttggcagagcgtttagctattccgcgccgcgaggccgccgagatcattgaagcctatttc
caggagttcccggccgtgaaagagtacatggacagcgccatcaaccaggcccgtgaccag
gagtttgtggagaccttattgggtcgccgccgctacttgcgcgacatcaattcccgtaac
cagaacatcagaggctacgccgagcgaaacgccatcaacgcgcctattcagggaaccgca
gccgatatcatcaagattgccatgatcaacattgaccagtggctgcgtgaagagaaactg
gccagccgcatgattctgcaggtgcatgatgaattggtgtttgacgtgctaaaagaagaa
ctgcccgtagtacagcccaagattgaggaactcatgaagaacgccttcccgctgagtgta
cctatggaagtaggcttaggcacgggtgaaaactggttgcaggcacactaa

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