Rufibacter tibetensis: DC20_09520
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Entry
DC20_09520 CDS
T04099
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
rti
Rufibacter tibetensis
Pathway
rti02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DC20_09520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_6
Ice_binding
CHU_C
DUF11
Adap_comp_sub
Motif
Other DBs
NCBI-ProteinID:
ALI99172
UniProt:
A0A0P0CV29
LinkDB
All DBs
Position
2365840..2370918
Genome browser
AA seq
1692 aa
AA seq
DB search
MQGISIAAGAGYESKGNSKIEKGVLRAGSNSKGAWAEVGRVYADLQRQQPTATLNATALS
GGKLQPGVYRIKGNVHLQKSLELLGSKSPNGVFVFQVEGDMQVDPAVNIELRQGAKAKNV
FWQVAGLVTVGSQSSFKGTVVAANNITAGKNASFEGKLLSTNGKITLSNARVTDHGNECF
SDLEVKQVVSEGPYRVGLLVTYTITLKNLGPDDENNVVVHFEMPSGIQYLSSTTSQGSSF
NQFEGWRIAKFPKGSEATMVVQARIMRTEFSTTVATVTGDCADPNIKSNTSELSICATPS
KPGEISGLTSLCVNTPGNVYRIEPMSGARKYNWTLPEGWAITSGLETNSITVTTGSAEAN
GTITVRAVNACGDGPETVLAVSTVSFPPPTPSAISGPQEICLAPDGIVYSINTVASAVSY
SWELPSGWSIVKGQGTTFITVNAGSSGGKVKVTAENGCGKSASSEIQVTVSPAAPLKPNA
ISGPGQVCANSDGNTYEVPAVPNATSYTWTIPAGWSIVAGQGTNRITVRSGSSAGDVTVT
AQNICGTSAVTSLPVTIASAAPVVGAISGETALCLSTAEHAYSVEEVENATTYTWSVPAD
WRILSGQGTRRINVKVGSSGEVRLVASNACGNGSAVPLKVAVGAGPPATPGTISGMIAPC
KDQENLVYSVSAGADVATYTWTVPQGWTIISGQGTQSITVKAGSSAGNISVIGANGCGNS
PERTLSVAPALAAPVVPASINGEAVPCVNGQQTYSVPNAVEGLTYTWTVPSGWIIVSGQG
TGTLTVNAGANLGQVTVTASNSCGRSASTTMEVTPTTGAPALTASIQGEVAVCGNTNELT
YSISSTNAASSFQWEVPTGWTIISGQGTREIKVKAGTSNGTIQVSARNGCGQSTTRSLAV
AISSVLPATPGQITGPPNVCANMGEVTYSIAAVTDATSYIWSVPATWTIVRGQGTTSLVV
RVGTMAEQVQVTATNACGTSAASRLNIDMSQAAPAPVGPITGEKAFCASSTTRTYTVAQN
EEAKTFTWSVPAGWTIESGQGTRSIRVVPGSVGGYLKVVASNYCGSTSDSTNITISQPLA
TDPITINGTKASCLTTAPATYSVTAVSGATQYSWTVPAGWEILSGQNTPSIQVKAGAGSG
NVSVAVSNTCGSSVSGSMAVSVSSTEPFSLGAIAGQSATCATTRVTYQVAADANVNTYTW
TVPAGWTLESGQGTNSITVVPGNAGGTVSVTGENGCGVVSSPSTLQVQVQRELPLKPSPI
QATALELTPCAGQNGLVFRIDPVNGATSYEWSFPADWKIESGQGTTSITLTAGSLPGQVS
VVAKNGCGQSESQVVAVTPTTGAPVINGDIEGSAMVCANENGVTYRINASGASQYLWTVP
SGWNLVSGQNTNTITVIPTTTGGAIKVEVQNGCGVKAEKSLAVTPSTAGTLNPGVINGPA
SFCASPEQVVYTVTQVDGAVAYEWTVPTGWSIISGQGTTSITAIGQAGAGQVSVKAVNGC
GSSAAATLAVTVAPGLGTALEIKDESTVCVGNQFSVPAITGVSYKWSIVSDLPGWSITSG
QGSNKVTLQGPADAPMSSARVVVEANNGTCSVTLAGMDVTPRHLASQLHIPNVFSPNHDG
KNDLWVVRNLLEFPENELVIMNRWGSEVYRMKKYRNNWNGSDLAEGTYYYVLRVRLCEGQ
EVTHKGYVTIMR
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
ttgcagggtatttccattgcagcaggggcaggttatgaaagcaaaggcaacagcaaaata
gaaaaaggtgttcttagagctggatccaactcaaaaggagcctgggccgaagtgggcaga
gtgtacgctgatttgcagcggcaacaacccaccgctaccttgaacgccacagccctgtca
ggtggtaagttgcaacccggggtgtaccggattaaaggaaatgtgcatcttcaaaagtcc
ctggaactgttagggagcaaatctcctaacggtgtgtttgtgttccaggtagaaggagac
atgcaggttgaccccgctgtaaacattgaactgcgtcagggtgccaaggcgaagaacgtt
ttctggcaagtagcaggcttggtaacagtaggttcccaaagttctttcaaaggaactgta
gtggcagctaacaacattactgccgggaaaaacgcctcttttgaaggaaagctgttaagt
acaaacgggaaaattaccctttccaacgccagggtaacagatcatggaaatgaatgcttc
tcagatttggaagtaaaacaggtggtaagcgagggtccgtaccgggttggcttattagtt
acttataccattaccctcaaaaacttgggtcctgatgatgagaacaacgtggtggtgcat
tttgaaatgccatccgggattcagtacctgagttccactacttcccaaggttcctctttt
aatcagtttgaaggatggagaatcgccaagttcccgaaaggaagcgaagccaccatggtt
gtgcaggcaagaatcatgagaaccgaattctccacgactgtagccaccgtgaccggcgac
tgtgccgaccctaacatcaaaagcaacacgtctgaattatctatctgcgccactccctct
aagcccggggagatttctggtttaacctctctttgcgtaaatacccccggaaacgtgtac
cggatagagccaatgagtggggcccgtaaatacaactggaccctgcccgaagggtgggcc
atcacgtcggggctggaaacgaattctattaccgttactaccggaagcgcggaagccaat
ggaaccatcacggtgagagcggtgaatgcctgcggagatggtcctgaaaccgtattggcg
gttagtacggtttctttccctcctcctacaccttctgcaatctcaggcccccaggaaatc
tgtttagccccggatggaattgtttattccatcaatactgtggccagtgcggtttcctat
tcctgggagttgccctccggttggtccattgtaaaagggcagggaacaactttcattacc
gtaaatgcagggtcttcgggaggaaaagtaaaggtgacggctgaaaatggctgcgggaaa
agcgccagcagtgaaatacaggtaactgtttctccggcggctccgctgaaaccaaacgct
atctcagggccaggccaggtttgcgccaactctgacggaaacacctacgaagtaccggcg
gtgccgaatgccaccagctatacctggaccattccggctggctggagcattgttgccgga
caaggtaccaatagaatcacagtacgctccggctcctcggccggcgacgtaactgtaacc
gcgcaaaacatttgtggaaccagtgctgtcacatcgctgccggttaccattgcctcagca
gcccctgtagttggagcaatttcgggagaaacagctttgtgtctctcaaccgcagagcat
gcctattctgttgaagaggtagagaatgccactacctatacctggagtgtgcccgctgac
tggcggattttatctgggcaaggcacccgcagaatcaacgtgaaagttggctctagtggt
gaggttagattggtagcctcaaatgcctgcggaaacgggtcagcagtacccttgaaagta
gcggtaggcgccgggccaccagcaaccccgggtactatttcaggaatgattgctccttgt
aaagatcaggaaaacttagtctattcagtctctgccggagcagacgtagccacctatacc
tggaccgttccccaaggctggaccatcatctcggggcaaggcacacaatccattaccgta
aaagcaggttcatccgccggaaacatttctgtgattggggcaaacgggtgcggaaacagt
cctgagagaaccttgtcagtagctcctgcccttgcggctcccgtggttccagcttctatt
aatggagaggcggtaccgtgtgttaatgggcagcaaacgtattctgttcctaatgcggta
gagggcctcacctatacctggacagtaccctccggttggatcattgtttccgggcagggt
acgggcactctgactgtaaacgctggagcaaaccttggtcaagtaaccgtaacggcaagc
aatagctgcggccgaagcgcgtcaaccaccatggaagttacgcctaccacgggtgcaccc
gctttaacggcgagcattcagggagaggtagcggtgtgtggcaatacaaatgaacttact
tacagcatctcctccaccaatgctgcttcttctttccagtgggaggttccaactggctgg
accattataagtgggcaaggaacccgcgaaatcaaagttaaagcaggcacttctaatggt
accattcaggtttcggccagaaatggttgcggacagagcacaactcgttccttggcggta
gccatctcttcagtacttcctgcaacaccgggtcagataacagggcctcccaatgtttgc
gctaacatgggagaagtaacctactctatagcagccgtgacagacgccacctcctacatc
tggtctgttcccgccacctggactattgtgcgggggcagggtactacttctctggtggtg
cgggtaggcactatggcagaacaagtgcaggtaaccgccaccaatgcctgtggcaccagt
gccgcctcaaggctgaacatagacatgtctcaagcagcgccagcccccgttggccctatt
actggagaaaaagcattttgtgcttcttccaccacgcgtacctataccgtggctcagaac
gaagaagctaaaacctttacctggtctgttccggctggttggaccattgaatctgggcaa
ggtaccaggtccattagggtggttcctgggtcagtgggaggttatttgaaagtggtcgcc
tccaattattgcggaagcacctcagactctaccaacatcaccatctctcagccgcttgca
acagaccctattactatcaacggcacgaaagcatcctgcttgactactgccccggccacc
tattccgtaacagcagtttcaggcgccactcagtacagctggactgttcctgctggctgg
gaaatccttagcgggcaaaacaccccttctatccaggtaaaagcaggagcaggaagcggg
aatgtgtctgttgcagtgtccaacacgtgtggatccagtgtttctggcagcatggccgtt
agtgtctccagcacagagccctttagccttggggccattgccgggcagtctgccacctgt
gctaccacacgggtaacctatcaggtagccgctgatgccaatgtgaacacctacacctgg
acagtgcccgccggctggacacttgagtcagggcaaggaacaaactctatcaccgtagtg
ccaggtaacgcaggcggaacggtgagcgtaaccggcgagaacggctgcggggtagtctca
agccccagtaccttgcaagtgcaagtgcagagagaactgccattgaagccgagtcctatt
caggcaactgctttggaacttactccttgtgctggtcaaaacggccttgttttcagaata
gacccggtaaacggagccacgtcctatgagtggtctttcccggcagactggaaaattgaa
tcaggacaaggaacaacctctatcaccttaactgccggaagtttgcctgggcaagtaagt
gtggttgccaaaaatggctgtggccagagcgaaagccaggtagtagcggtaactcccacc
acaggggcaccagtaataaacggtgacattgagggaagtgccatggtttgcgcgaatgaa
aatggagtcacctaccgcatcaatgcttccggggcaagccaatacctctggacagtgcct
tcaggctggaacctggtgtcaggacagaacacgaacaccatcaccgttattccaaccact
acaggtggcgccattaaagttgaagtgcagaatggttgcggggtaaaggcagagaaaagt
ttggcggttacccctagcaccgcaggaacgttgaacccgggcgtaatcaatggcccagct
tccttctgcgcctctcctgaacaagtggtttacacggtaacccaggtggacggagcagtt
gcctatgaatggacggtacctaccggttggagcatcatcagcggacaaggcactaccagc
attacggccataggccaggcaggtgcgggacaggtgagcgtgaaggcggtaaatggctgc
ggaagcagtgccgctgctacgttggcagtgacggtggctcctggtttaggaactgccctg
gagatcaaagacgagagtactgtttgcgtaggcaatcaattctcggttccggccattact
ggcgtgtcttacaaatggagcattgtttctgatttgccgggttggtccatcacctcaggc
caagggtcaaacaaggtaaccctgcaaggtcctgctgatgcgcctatgtcttcggccaga
gttgtggtggaggcaaacaatggaacctgttccgttaccttggctggaatggacgtcacg
cccagacatctggcctcccagttacacatccctaatgttttctcccctaaccacgatggc
aagaatgacctgtgggtagtgagaaatctgctggagtttccggagaacgaactggtgatc
atgaaccgctggggcagtgaggtgtaccgcatgaagaagtaccgcaacaactggaacgga
agcgacctcgccgaaggtacttattactatgtactgcgcgtacgtctctgcgaaggtcag
gaagtgacgcacaaaggctacgtaactataatgcgctaa
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