Rufibacter tibetensis: DC20_10105
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Entry
DC20_10105 CDS
T04099
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rti
Rufibacter tibetensis
Pathway
rti00061
Fatty acid biosynthesis
rti00071
Fatty acid degradation
rti01100
Metabolic pathways
rti01212
Fatty acid metabolism
rti02024
Quorum sensing
rti04146
Peroxisome
Module
rti_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DC20_10105
00071 Fatty acid degradation
DC20_10105
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DC20_10105
09145 Cellular community - prokaryotes
02024 Quorum sensing
DC20_10105
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rti01004
]
DC20_10105
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rti04147
]
DC20_10105
Enzymes [BR:
rti01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DC20_10105
Lipid biosynthesis proteins [BR:
rti01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DC20_10105
Exosome [BR:
rti04147
]
Exosomal proteins
Exosomal proteins of breast milk
DC20_10105
Exosomal proteins of breast cancer cells
DC20_10105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
VMAP-M14
Motif
Other DBs
NCBI-ProteinID:
ALI99265
UniProt:
A0A0P0CS16
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All DBs
Position
2504163..2505929
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AA seq
588 aa
AA seq
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MKVTRVFDLLTNQLQQFPQPDCLAAKINGEWVKYSTQQVLDTANRLSLALIKSGIRKDDK
VALISMNRPEWTFSDYGIQQTGAVSVPLYPTITVEDYRYILKDSEAKLILVSTEDLYNKV
KEAVADLPGVQEIYTFDRVPGAKHWSELLQLADGEDPATLEPYKADVTPNDLLSIIYTSG
TTGAPKGVMLSHNNLVSNFTNVKPFVPVNQEHRALSFLPLCHIYERMVSCIYFSVGVSIY
FAESIEKVGDNLREVGPHIFVTVPRLLEKVYDKIVAKGGELTGVKKGLFFWALALGQKYD
TRTSPGFLYDTQLKLARKLIFSKWQDALGGNVKVIVSGGAALQPRLARVFWGANIRIMEG
YGLTETSPVIAVNRYEPENNVIGTVGPAINNVEIKIAQDGEILTRSESVMVGYYKRPDLT
AEVIDPDGWFHTGDIGELVEGKFLKITDRKKEMFKTSGGKYIAPQLIENKLKESLVVEQV
MVVGEGEKFPSALIVPAYEGLKEWCRIRNVPYSTDEEMIKKPEVIAKFQKEVDRMNEHLA
QYERIKKFVLLPKLWSVETGEMTPKLSIKRKVITTNYRELIDSLYRTA
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaacccgggtttttgatttattaaccaaccagttacagcagtttccgcaacca
gactgcctggccgcaaaaatcaatggagaatgggtgaagtacagtactcagcaagtgctg
gatacagccaacaggttgagccttgcgctgatcaagtctgggatcaggaaagacgacaaa
gtggcgcttatctccatgaaccgcccggagtggactttttctgactatggcattcagcaa
accggtgccgtaagcgtgccgttgtaccctaccattacggtggaagattaccggtacatc
ctgaaagattctgaggccaaactgattctggtctctacggaggacctgtacaacaaagta
aaagaagccgttgctgatcttccgggagtgcaggagatctatacctttgaccgcgtaccc
ggcgccaagcactggtctgagctgctgcaactagccgatggcgaagacccggctactctg
gaaccctacaaagcagacgttactcctaatgacctgctttccattatttatacctctggt
actaccggcgctcctaaaggggtaatgctctcgcacaacaacctggtgagcaacttcacc
aatgtgaagccgtttgtgccggtgaaccaggagcaccgggccttgagcttcttgccgctt
tgccatatctatgagcgcatggtgtcttgcatctacttctcagtgggggtgtctatctat
tttgctgagagtattgaaaaagtgggcgataatctcagggaagtaggaccgcacatcttt
gtgaccgtgccgcgcctgctggaaaaagtgtatgacaaaattgtggctaaggggggagag
ttgaccggcgtgaaaaaagggttgttcttctgggcgttagcgcttggccagaaatacgac
acccgcacctcgccgggcttcctgtatgacacacagttgaaactggcccgtaagcttatc
ttctctaaatggcaggatgcgttaggcggaaacgtaaaagtgattgtgtctggtggagca
gccttgcaaccacggttggcccgcgtgttctggggagctaacatccggatcatggaaggt
tacggtctaactgaaacgtcaccggtaattgccgtgaaccgctatgagccggagaacaac
gtcatcggcaccgttggtcccgctatcaacaacgtggaaatcaagatagcccaagacggt
gaaatccttacccgttctgagagcgtgatggtgggctactacaaacgccctgacctgacc
gccgaagtaattgacccagacggctggttccataccggagacattggcgaactggtagaa
ggcaagttcctcaaaattactgaccgcaagaaagagatgttcaaaacctctggcggtaag
tacatagcgcctcagttaattgaaaataaactgaaagagtctttggtggtggagcaggtg
atggtggtaggcgaaggcgaaaaattcccttctgccttgattgtcccagcctatgaagga
ttaaaagagtggtgccgtatccgcaatgttccttactctaccgatgaggaaatgatcaag
aagcctgaggtgatagctaaattccagaaggaagtagaccgcatgaacgagcatttggcg
caatacgagcgaatcaaaaagtttgtgctgctgcctaaactctggagcgttgaaaccggg
gaaatgacccctaaactcagcatcaagcgtaaggtcatcaccaccaactatcgtgagtta
attgacagcttatatcgcactgcttaa
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