Rufibacter tibetensis: DC20_12105
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Entry
DC20_12105 CDS
T04099
Name
(GenBank) transglycosylase
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rti
Rufibacter tibetensis
Pathway
rti00550
Peptidoglycan biosynthesis
rti01100
Metabolic pathways
rti01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DC20_12105
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DC20_12105
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rti01003
]
DC20_12105
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rti01011
]
DC20_12105
Enzymes [BR:
rti01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DC20_12105
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DC20_12105
Glycosyltransferases [BR:
rti01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DC20_12105
Peptidoglycan biosynthesis and degradation proteins [BR:
rti01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DC20_12105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
ALJ01412
UniProt:
A0A0P0CCJ0
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All DBs
Position
2964623..2966899
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AA seq
758 aa
AA seq
DB search
MRNLWKLFAFGAVFVILYFVSVDQNLFYLFGESPGLEDLENPRNNLPSEIYTADGVLVGR
YFRENRDLVPFDSIAPVMVKALVATEDERFYEHQGIDPISVLAAVKDNLKGESRGASTLT
QQLAKNLYKTRTKNTKGILGHVPLVSTVVAKTKEWNTSIKLEQRYTKDEILGMYLNTVDF
GSNAFGIKVASKTFFSTTPDKLKPEEAAMLVGVLKAPTTYNPRFNPKNAITRRNVVLQQM
ARNKVITPAQADSLSQLPIDLKYHVEQHLDGVPAYYRQAVNDFVRNWAEERELDIYADGL
KIYLTIDSRMQRLAEEALREKMKTLQARFENQLRGKNPWVDDQNKEIPGFIENAIKRTGV
YASLKNKYGEDTAAINEALNTPKKMTVFSWKEPKEMTMSSMDSLRYYKKFLRAGMMTMDP
FTGHIKAWVGGIDYDNFKFDHVKQARRQPGSTFKPFVYAAAIDGGYSPCDRIPDRRVTIK
YVENGKPMEWTPHNASYSISGSNMTLRHAMGRSINTVTAQLTEAIGWDTVRDFARRMGIT
SPLQAVPSIGLGSSDVSIYEMVNSYSTFVNNGFLNKPMLVMRIEDRNGNVVEQFNPQQKR
VISEETAFLMVHMLKGTMEEPGGTSQALWEYDLWKKGNQVAGKTGTTSNHSDGWYMGVTK
DLVTGVWVGGEDRSIHFRTSATGEGSKTALPIFGRFMEKVYREPSLGVKLGAFPKPKTKI
SKTYNCVTPAPPRRRVVIDTIAVDDLLDKLNDSITSQF
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atcaggaacctctggaagctttttgcttttggggcggtctttgtcatcctatactttgtt
tccgttgaccagaacctgttctacctgttcggagagtctccggggctagaggatttggag
aacccaagaaacaacctgccctctgagatctatactgcagacggggtgctggtgggccgt
tatttccgggagaaccgtgacctggtgccttttgacagcattgccccggtgatggtgaaa
gcgctggtggccaccgaagacgagcggttttacgagcaccagggcattgaccctatctct
gtactagcggcggtaaaggacaacctgaagggtgaatcccgcggagcctccacgcttacg
cagcagttagccaaaaacctttataaaacgcgaaccaagaacaccaaaggaatcttaggg
catgtgccgttggtatcaacggtggtggccaaaaccaaagagtggaacacctccattaag
ttagagcaacgctacaccaaagatgagattttgggcatgtacctcaacaccgttgatttc
gggagcaatgccttcgggataaaggtggcgtccaagacgttcttcagtactaccccagac
aaacttaagcctgaggaagccgccatgctggtgggggttttgaaagcgcctaccacctac
aatccgcggttcaaccctaaaaatgccatcactcgcagaaatgtggtgttgcagcagatg
gcccgcaataaagtcattactccggcccaggccgactccctttcccaactacccattgac
ctgaaataccacgtagagcagcacttagacggggttcctgcctactaccgccaggccgtg
aacgactttgtgcgcaactgggccgaagaacgggaactggacatttacgctgatggcctc
aagatttacctcactattgactcccgcatgcagcgccttgcagaagaagcccttcgcgaa
aagatgaagaccctgcaagcccgttttgaaaaccaattacgtggcaagaacccgtgggta
gatgaccagaacaaagagatacccggatttattgagaatgccatcaagcgtacaggtgtt
tatgcatctttgaaaaacaagtacggagaagatacagcagccatcaatgaggctttgaac
acgcctaagaagatgaccgtcttcagctggaaggagcccaaagagatgaccatgagttct
atggactctctgcgttactacaaaaagtttctgcgggcaggcatgatgaccatggatcct
ttcactggtcacattaaagcttgggtgggtggtattgactatgataacttcaagtttgac
cacgtaaagcaggccagacgccagccgggttcaaccttcaaacccttcgtgtacgccgct
gctattgacggaggatattcgccctgtgacagaattccagaccggcgggtcaccatcaaa
tacgtggagaacggcaagccgatggagtggacgccgcataacgccagctattccatttca
ggaagtaacatgaccttgcgacacgccatgggccggtccattaacaccgtaaccgctcag
ctgaccgaagctattgggtgggacacggtccgggatttcgcccgccgtatggggatcacc
agtcccttgcaggcggtgccgtctattgggcttgggtcttcagacgtgagcatttacgag
atggtgaattcttacagcacgtttgtcaacaacggcttcctgaacaaacccatgctggtc
atgcgcatagaagaccgtaacggcaacgtggtggagcaatttaacccacagcagaaacgc
gtaatttcagaagaaaccgctttcctgatggtgcacatgctcaaaggaaccatggaagaa
ccaggcggaacatcacaagcgctgtgggagtacgatctctggaaaaaaggcaaccaggta
gctggtaaaaccggtaccacctctaaccactcagacggctggtacatgggcgtgacaaaa
gacctggtgacgggtgtttgggtaggcggggaagaccgaagcatccacttcaggacttca
gccacgggcgagggttctaaaacagcgctcccaatttttgggcggttcatggagaaagtg
taccgtgagcccagcttgggagtgaaactaggtgcctttcctaaacctaagacaaaaatc
agtaaaacctataactgcgtcacgccagcgcctcctcgccgccgtgtagtaatagacacc
atagctgtagatgacttgcttgacaagttgaacgacagcatcacctcgcagttttaa
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