Rufibacter tibetensis: DC20_13890
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Entry
DC20_13890 CDS
T04099
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rti
Rufibacter tibetensis
Brite
KEGG Orthology (KO) [BR:
rti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rti03009
]
DC20_13890
Enzymes [BR:
rti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DC20_13890
Ribosome biogenesis [BR:
rti03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DC20_13890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_15
Methyltransf_25
Cons_hypoth95
PrmA
Amidohydro_1
Methyltransf_11
PCMT
Motif
Other DBs
NCBI-ProteinID:
ALJ01460
UniProt:
A0A0P0CXD3
LinkDB
All DBs
Position
complement(3385085..3386440)
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AA seq
451 aa
AA seq
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MAAEGKCLVRHDNLVVFISDVAPGDVVDVKITKKRKNYLEGVPVHFHEYSEARTQPFCEH
FGVCGGCKWQHIPYETQLFYKQKQVNDNVERIGKIKGHEMLPILPSDRVSFYRNKLEYTF
SDNAWLTKEQIDSGEELERRALGFHIPLRFDKIVDLRHCYLQPGPSNEIRLAVKGYAIEH
NLPFFDLVKQEGFLRNLIVRTANTGDLMVIVQVFQDKMEWLQPLLDFLLQEFPQITSLQY
VVNSKGNETFHDLEVVCYHGDPYIHEQMEGLRFRVGPKSFYQTNSEQAYNLYKLTREFAL
LNGTETVYDLYTGAGTIANFVARSAAQVVGIEYVASAIEDAKINSQINDITNTHFYAGDM
KDVLTNELFAHHGRPDVIITDPPRAGMHPDVVAKLLEVKANRIVYVSCNPATQARDLEML
SELYDVIKIQPVDMFPQTYHVESVALLTLRG
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgagggcaagtgcctggtgcgccatgacaacctggtggtattcatttctgac
gtggctcccggcgacgtggtggatgttaagatcaccaaaaaacggaagaattacctggag
ggagtgcctgtgcatttccatgagtattctgaggcgcgtactcagccgttttgtgagcat
ttcggtgtatgcgggggatgtaagtggcagcacattccgtatgaaacccagctgttctac
aagcagaaacaggtaaatgacaacgtggagcgcatcggcaagatcaagggccatgaaatg
cttcccatccttccctcagaccgggtaagcttttaccggaacaagctggaatataccttc
tcagacaacgcctggttgaccaaagaacagatcgacagcggtgaagaactggagcgaaga
gcattaggcttccatatcccgctaaggttcgataaaatagtagacctgcgccactgctac
ctgcaacctggtccctctaatgagatcaggctagccgtaaaagggtatgccattgagcac
aacctgccgttctttgacctggtgaagcaggaaggctttctcaggaacctgattgtacgc
actgccaacaccggtgacctgatggtgattgtacaagttttccaggacaagatggagtgg
ctgcagcccctgctggatttccttttgcaggagttcccgcagatcacctcgctgcagtac
gtggtgaatagcaaaggcaacgagacgttccatgacctggaggtggtgtgctaccacggt
gacccgtacattcatgagcagatggaagggctccgtttcagagtggggccaaagtctttc
taccagaccaactcagaacaggcgtacaacctctacaaacttacacgtgagttcgcccta
ctaaatggcacagagacggtatatgatctttatacgggtgctggtaccatcgctaacttc
gtggcaaggtcagccgcgcaggtggtaggcattgagtacgtggccagcgccattgaagac
gccaaaatcaactcgcagatcaatgacatcaccaacacgcacttttacgccggtgacatg
aaggacgtgctcaccaatgaactctttgcgcatcatggtaggccagatgtcattatcaca
gatccgccccgcgcgggcatgcacccagacgtagtagccaagctcttggaagtgaaagcg
aaccggattgtgtacgtaagctgcaacccggccacccaggcccgcgaccttgaaatgctg
tctgagctgtacgatgtgatcaaaattcagccggtagatatgttccctcagacgtaccat
gtagaaagcgtggcactgctgactttgagaggataa
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